RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 ZNF302Q9NR11 478 aa10.38□□□□□ -0.75
PTPRM-210ENST00000578916 IGKV6D-21A0A0A0MT36 114 aa10.37□□□□□ -0.75
PTPRM-210ENST00000578916 SPDYE4A6NLX3 237 aa10.37□□□□□ -0.75
PTPRM-210ENST00000578916 NT5C1B-RDH14C9J2C7 533 aa10.37□□□□□ -0.75
PTPRM-210ENST00000578916 GPR32O75388 356 aa10.37□□□□□ -0.75
PTPRM-210ENST00000578916 EPCAMP16422 314 aa10.37□□□□□ -0.75
PTPRM-210ENST00000578916 RFX1P22670 979 aa10.37□□□□□ -0.75
PTPRM-210ENST00000578916 GIT2Q14161 759 aa10.37□□□□□ -0.75
PTPRM-210ENST00000578916 FNDC1Q4ZHG4 1894 aaPredicted RBP10.37□□□□□ -0.75
PTPRM-210ENST00000578916 CEP55Q53EZ4 464 aa10.37□□□□□ -0.75
PTPRM-210ENST00000578916 MIS18BP1Q6P0N0 1132 aa10.37□□□□□ -0.75
PTPRM-210ENST00000578916 ABHD15Q6UXT9 468 aa10.37□□□□□ -0.75
PTPRM-210ENST00000578916 TMC5Q6UXY8 1006 aa10.37□□□□□ -0.75
PTPRM-210ENST00000578916 NFXL1Q6ZNB6 911 aa10.37□□□□□ -0.75
PTPRM-210ENST00000578916 CCDC149Q6ZUS6 474 aa10.37□□□□□ -0.75
PTPRM-210ENST00000578916 HEATR3Q7Z4Q2 680 aa10.37□□□□□ -0.75
PTPRM-210ENST00000578916 CABP7Q86V35 215 aa10.37□□□□□ -0.75
PTPRM-210ENST00000578916 SMC5Q8IY18 1101 aa10.37□□□□□ -0.75
PTPRM-210ENST00000578916 CKAP2LQ8IYA6 745 aa10.37□□□□□ -0.75
PTPRM-210ENST00000578916 SIX5Q8N196 739 aa10.37□□□□□ -0.75
PTPRM-210ENST00000578916 VPS52Q8N1B4 723 aa10.37□□□□□ -0.75
PTPRM-210ENST00000578916 HELQQ8TDG4 1101 aa10.37□□□□□ -0.75
PTPRM-210ENST00000578916 HINFPQ9BQA5 517 aa10.37□□□□□ -0.75
PTPRM-210ENST00000578916 MRPL9Q9BYD2 267 aaKnown RBP10.37□□□□□ -0.75
PTPRM-210ENST00000578916 RWDD1Q9H446 243 aaPredicted RBP10.37□□□□□ -0.75
PTPRM-210ENST00000578916 DUSP12Q9UNI6 340 aa10.37□□□□□ -0.75
PTPRM-210ENST00000578916 hCG_1642624A0A1W2PR95 340 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 CCDC69A6NI79 296 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 C22orf31O95567 290 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 CCNE2O96020 404 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 ZNF76P36508 570 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 BCAR1P56945 870 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 ANTXR2P58335 489 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 NLRP11P59045 1033 aaKnown RBP10.36□□□□□ -0.75
PTPRM-210ENST00000578916 NUCB1Q02818 461 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 PTH1RQ03431 593 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 PUM1Q14671 1186 aaKnown RBP eCLIP10.36□□□□□ -0.75
PTPRM-210ENST00000578916 CLLU1OSQ5K130 101 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 SWSAP1Q6NVH7 229 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 CASC1Q6TDU7 716 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 TRMT1LQ7Z2T5 733 aaKnown RBP10.36□□□□□ -0.75
PTPRM-210ENST00000578916 GPR149Q86SP6 731 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 PPFIBP1Q86W92 1011 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 CCDC60Q8IWA6 550 aaPredicted RBP10.36□□□□□ -0.75
PTPRM-210ENST00000578916 MB21D2Q8IYB1 491 aaPredicted RBP10.36□□□□□ -0.75
PTPRM-210ENST00000578916 CCDC82Q8N4S0 544 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 SLC22A17Q8WUG5 538 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 RUFY2Q8WXA3 655 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 AUTS2Q8WXX7 1259 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 PGBD1Q96JS3 809 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 MAP7D2Q96T17 732 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 ZBP1Q9H171 429 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 KCNK12Q9HB15 430 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 LY9Q9HBG7 655 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 AKT3Q9Y243 479 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 TAF6LQ9Y6J9 622 aa10.36□□□□□ -0.75
PTPRM-210ENST00000578916 A0A0U1RQF3 1178 aa10.35□□□□□ -0.75
PTPRM-210ENST00000578916 CARNS1A5YM72 827 aa10.35□□□□□ -0.75
PTPRM-210ENST00000578916 ZBTB42B2RXF5 422 aa10.35□□□□□ -0.75
PTPRM-210ENST00000578916 MEIS1O00470 390 aa10.35□□□□□ -0.75
PTPRM-210ENST00000578916 FOSP01100 380 aaPredicted RBP10.35□□□□□ -0.75
PTPRM-210ENST00000578916 CALM1P0DP23 149 aa10.35□□□□□ -0.75
PTPRM-210ENST00000578916 CALM2P0DP24 149 aa10.35□□□□□ -0.75
PTPRM-210ENST00000578916 CALM3P0DP25 149 aa10.35□□□□□ -0.75
PTPRM-210ENST00000578916 CTSAP10619 480 aa10.35□□□□□ -0.75
PTPRM-210ENST00000578916 RXRAP19793 462 aa10.35□□□□□ -0.75
PTPRM-210ENST00000578916 EIF4BP23588 611 aaKnown RBP10.35□□□□□ -0.75
PTPRM-210ENST00000578916 TMOD1P28289 359 aa10.35□□□□□ -0.75
PTPRM-210ENST00000578916 CLCN3P51790 818 aa10.35□□□□□ -0.75
PTPRM-210ENST00000578916 POLGP54098 1239 aaPredicted RBP10.35□□□□□ -0.75
PTPRM-210ENST00000578916 DDX53Q86TM3 631 aaKnown RBP10.35□□□□□ -0.75
PTPRM-210ENST00000578916 ZNF710Q8N1W2 664 aa10.35□□□□□ -0.75
PTPRM-210ENST00000578916 TMTC2Q8N394 836 aa10.35□□□□□ -0.75
PTPRM-210ENST00000578916 ANO3Q9BYT9 981 aa10.35□□□□□ -0.75
PTPRM-210ENST00000578916 SFXN1Q9H9B4 322 aa10.35□□□□□ -0.75
PTPRM-210ENST00000578916 IGSF9Q9P2J2 1179 aa10.35□□□□□ -0.75
PTPRM-210ENST00000578916 CEP131Q9UPN4 1083 aa10.35□□□□□ -0.75
PTPRM-210ENST00000578916 IRAK3Q9Y616 596 aa10.35□□□□□ -0.75
PTPRM-210ENST00000578916 R4GN57 208 aa10.35□□□□□ -0.75
PTPRM-210ENST00000578916 GVINP1Q7Z2Y8 2422 aa10.35□□□□□ -0.75
PTPRM-210ENST00000578916 MAGEB2O15479 319 aa10.34□□□□□ -0.75
PTPRM-210ENST00000578916 PRC1O43663 620 aa10.34□□□□□ -0.75
PTPRM-210ENST00000578916 ZC3H11AO75152 810 aaKnown RBP eCLIP10.34□□□□□ -0.75
PTPRM-210ENST00000578916 CFHP08603 1231 aa10.34□□□□□ -0.75
PTPRM-210ENST00000578916 ATP4AP20648 1035 aa10.34□□□□□ -0.75
PTPRM-210ENST00000578916 NONOQ15233 471 aaKnown RBP eCLIP10.34□□□□□ -0.75
PTPRM-210ENST00000578916 EFCAB12Q6NXP0 572 aa10.34□□□□□ -0.75
PTPRM-210ENST00000578916 ZC3H14Q6PJT7 736 aaKnown RBP10.34□□□□□ -0.75
PTPRM-210ENST00000578916 RIN2Q8WYP3 895 aaPredicted RBP10.34□□□□□ -0.75
PTPRM-210ENST00000578916 SCLT1Q96NL6 688 aa10.34□□□□□ -0.75
PTPRM-210ENST00000578916 MTA3Q9BTC8 594 aa10.34□□□□□ -0.75
PTPRM-210ENST00000578916 EMILIN2Q9BXX0 1053 aa10.34□□□□□ -0.75
PTPRM-210ENST00000578916 ADAMTS10Q9H324 1103 aa10.34□□□□□ -0.75
PTPRM-210ENST00000578916 DACT1Q9NYF0 836 aa10.34□□□□□ -0.75
PTPRM-210ENST00000578916 WNT16Q9UBV4 365 aa10.34□□□□□ -0.75
PTPRM-210ENST00000578916 TCEAL9Q9UHQ7 104 aa10.34□□□□□ -0.75
PTPRM-210ENST00000578916 LOXHD1Q8IVV2 1947 aa10.33□□□□□ -0.76
PTPRM-210ENST00000578916 NARSO43776 548 aaKnown RBP10.33□□□□□ -0.76
PTPRM-210ENST00000578916 KLRC2P26717 231 aa10.33□□□□□ -0.76
PTPRM-210ENST00000578916 ADCY7P51828 1080 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms