RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 KCNV1Q6PIU1 500 aa11.36□□□□□ -0.59
SS18-210ENST00000578700 IQUBQ8NA54 791 aa11.36□□□□□ -0.59
SS18-210ENST00000578700 IL31RAQ8NI17 732 aa11.36□□□□□ -0.59
SS18-210ENST00000578700 MFSD14AQ96MC6 490 aa11.36□□□□□ -0.59
SS18-210ENST00000578700 TMEM260Q9NX78 707 aa11.36□□□□□ -0.59
SS18-210ENST00000578700 KIAA1468Q9P260 1216 aa11.36□□□□□ -0.59
SS18-210ENST00000578700 PRKAG3Q9UGI9 489 aa11.36□□□□□ -0.59
SS18-210ENST00000578700 TCHHQ07283 1943 aa11.36□□□□□ -0.59
SS18-210ENST00000578700 WDR87Q6ZQQ6 2873 aa11.35□□□□□ -0.59
SS18-210ENST00000578700 C19orf67A6NJJ6 358 aa11.35□□□□□ -0.59
SS18-210ENST00000578700 OPLAHO14841 1288 aa11.35□□□□□ -0.59
SS18-210ENST00000578700 GNAT1P11488 350 aa11.35□□□□□ -0.59
SS18-210ENST00000578700 LTBRP36941 435 aa11.35□□□□□ -0.59
SS18-210ENST00000578700 HSD17B4P51659 736 aa11.35□□□□□ -0.59
SS18-210ENST00000578700 USP11P51784 963 aa11.35□□□□□ -0.59
SS18-210ENST00000578700 ARHGAP4P98171 946 aa11.35□□□□□ -0.59
SS18-210ENST00000578700 CCDC173Q0VFZ6 552 aa11.35□□□□□ -0.59
SS18-210ENST00000578700 HYAL1Q12794 435 aa11.35□□□□□ -0.59
SS18-210ENST00000578700 MKRN4PQ13434 485 aaPredicted RBP11.35□□□□□ -0.59
SS18-210ENST00000578700 CALCRLQ16602 461 aa11.35□□□□□ -0.59
SS18-210ENST00000578700 UBE2SQ16763 222 aa11.35□□□□□ -0.59
SS18-210ENST00000578700 ANO6Q4KMQ2 910 aa11.35□□□□□ -0.59
SS18-210ENST00000578700 SPECC1Q5M775 1068 aa11.35□□□□□ -0.59
SS18-210ENST00000578700 PPP4R3AQ6IN85 833 aa11.35□□□□□ -0.59
SS18-210ENST00000578700 CYFIP1Q7L576 1253 aa11.35□□□□□ -0.59
SS18-210ENST00000578700 VSIG10LQ86VR7 867 aa11.35□□□□□ -0.59
SS18-210ENST00000578700 PHOX2BQ99453 314 aa11.35□□□□□ -0.59
SS18-210ENST00000578700 FUCA2Q9BTY2 467 aa11.35□□□□□ -0.59
SS18-210ENST00000578700 KCNH6Q9H252 994 aa11.35□□□□□ -0.59
SS18-210ENST00000578700 COL4A6Q14031 1691 aa11.34□□□□□ -0.59
SS18-210ENST00000578700 BECN2A8MW95 431 aa11.34□□□□□ -0.59
SS18-210ENST00000578700 GCOM1H8Y6P7 765 aaPredicted RBP11.34□□□□□ -0.59
SS18-210ENST00000578700 LINC01565O15544 149 aa11.34□□□□□ -0.59
SS18-210ENST00000578700 MBTPS2O43462 519 aa11.34□□□□□ -0.59
SS18-210ENST00000578700 NCK2O43639 380 aa11.34□□□□□ -0.59
SS18-210ENST00000578700 POLR2MP0CAP2 368 aa11.34□□□□□ -0.59
SS18-210ENST00000578700 TGFB3P10600 412 aa11.34□□□□□ -0.59
SS18-210ENST00000578700 GHRP10912 638 aa11.34□□□□□ -0.59
SS18-210ENST00000578700 HOXD8P13378 290 aaPredicted RBP11.34□□□□□ -0.59
SS18-210ENST00000578700 BMPR1AP36894 532 aa11.34□□□□□ -0.59
SS18-210ENST00000578700 CLK2P49760 499 aaKnown RBP11.34□□□□□ -0.59
SS18-210ENST00000578700 ZNF165P49910 485 aa11.34□□□□□ -0.59
SS18-210ENST00000578700 POSTNQ15063 836 aa11.34□□□□□ -0.59
SS18-210ENST00000578700 LONRF3Q496Y0 759 aa11.34□□□□□ -0.59
SS18-210ENST00000578700 RNF135Q8IUD6 432 aa11.34□□□□□ -0.59
SS18-210ENST00000578700 PDILTQ8N807 584 aa11.34□□□□□ -0.59
SS18-210ENST00000578700 APBB2Q92870 758 aa11.34□□□□□ -0.59
SS18-210ENST00000578700 DHX58Q96C10 678 aa11.34□□□□□ -0.59
SS18-210ENST00000578700 TRIM44Q96DX7 344 aaPredicted RBP11.34□□□□□ -0.59
SS18-210ENST00000578700 ANO3Q9BYT9 981 aa11.34□□□□□ -0.59
SS18-210ENST00000578700 ALG13Q9NP73 1137 aaKnown RBP11.34□□□□□ -0.59
SS18-210ENST00000578700 DDX25Q9UHL0 483 aaKnown RBP11.34□□□□□ -0.59
SS18-210ENST00000578700 DACH1Q9UI36 760 aa11.34□□□□□ -0.59
SS18-210ENST00000578700 PIK3CDO00329 1044 aa11.33□□□□□ -0.6
SS18-210ENST00000578700 ADAMTS3O15072 1205 aa11.33□□□□□ -0.6
SS18-210ENST00000578700 RB1P06400 928 aa11.33□□□□□ -0.6
SS18-210ENST00000578700 SLFN14P0C7P3 912 aa11.33□□□□□ -0.6
SS18-210ENST00000578700 IBSPP21815 317 aaPredicted RBP11.33□□□□□ -0.6
SS18-210ENST00000578700 ZNF76P36508 570 aa11.33□□□□□ -0.6
SS18-210ENST00000578700 STAT6P42226 847 aa11.33□□□□□ -0.6
SS18-210ENST00000578700 NDUFV1P49821 464 aa11.33□□□□□ -0.6
SS18-210ENST00000578700 BTG3Q14201 252 aaPredicted RBP11.33□□□□□ -0.6
SS18-210ENST00000578700 SMAD2Q15796 467 aaKnown RBP11.33□□□□□ -0.6
SS18-210ENST00000578700 IER5LQ5T953 404 aa11.33□□□□□ -0.6
SS18-210ENST00000578700 RRAGBQ5VZM2 374 aa11.33□□□□□ -0.6
SS18-210ENST00000578700 USP17L6PQ6QN14 398 aa11.33□□□□□ -0.6
SS18-210ENST00000578700 MOXD1Q6UVY6 613 aa11.33□□□□□ -0.6
SS18-210ENST00000578700 TRIM50Q86XT4 487 aa11.33□□□□□ -0.6
SS18-210ENST00000578700 C4orf32Q8N8J7 132 aa11.33□□□□□ -0.6
SS18-210ENST00000578700 SMARCE1Q969G3 411 aa11.33□□□□□ -0.6
SS18-210ENST00000578700 PBXIP1Q96AQ6 731 aa11.33□□□□□ -0.6
SS18-210ENST00000578700 CALML4Q96GE6 196 aa11.33□□□□□ -0.6
SS18-210ENST00000578700 EPSTI1Q96J88 318 aa11.33□□□□□ -0.6
SS18-210ENST00000578700 CDK5RAP3Q96JB5 506 aa11.33□□□□□ -0.6
SS18-210ENST00000578700 POP1Q99575 1024 aaKnown RBP11.33□□□□□ -0.6
SS18-210ENST00000578700 C11orf84Q9BUA3 381 aaPredicted RBP11.33□□□□□ -0.6
SS18-210ENST00000578700 PANK2Q9BZ23 570 aa11.33□□□□□ -0.6
SS18-210ENST00000578700 CUEDC2Q9H467 287 aa11.33□□□□□ -0.6
SS18-210ENST00000578700 SERTAD1Q9UHV2 236 aa11.33□□□□□ -0.6
SS18-210ENST00000578700 CD207Q9UJ71 328 aa11.33□□□□□ -0.6
SS18-210ENST00000578700 TELO2Q9Y4R8 837 aa11.33□□□□□ -0.6
SS18-210ENST00000578700 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.32□□□□□ -0.6
SS18-210ENST00000578700 SMTNL1A8MU46 457 aa11.32□□□□□ -0.6
SS18-210ENST00000578700 WNT7AO00755 349 aa11.32□□□□□ -0.6
SS18-210ENST00000578700 ENPP3O14638 875 aa11.32□□□□□ -0.6
SS18-210ENST00000578700 CHRNA1P02708 482 aa11.32□□□□□ -0.6
SS18-210ENST00000578700 TXKP42681 527 aa11.32□□□□□ -0.6
SS18-210ENST00000578700 NLRP12P59046 1061 aa11.32□□□□□ -0.6
SS18-210ENST00000578700 GRIN1Q05586 938 aa11.32□□□□□ -0.6
SS18-210ENST00000578700 NEDD9Q14511 834 aa11.32□□□□□ -0.6
SS18-210ENST00000578700 COL19A1Q14993 1142 aa11.32□□□□□ -0.6
SS18-210ENST00000578700 CTC1Q2NKJ3 1217 aa11.32□□□□□ -0.6
SS18-210ENST00000578700 GNPTABQ3T906 1256 aa11.32□□□□□ -0.6
SS18-210ENST00000578700 SLFN12Q8IYM2 578 aa11.32□□□□□ -0.6
SS18-210ENST00000578700 SAMD3Q8N6K7 520 aa11.32□□□□□ -0.6
SS18-210ENST00000578700 TRIML1Q8N9V2 468 aa11.32□□□□□ -0.6
SS18-210ENST00000578700 GPR20Q99678 358 aa11.32□□□□□ -0.6
SS18-210ENST00000578700 LMAN2LQ9H0V9 348 aa11.32□□□□□ -0.6
SS18-210ENST00000578700 DNAJC25Q9H1X3 360 aa11.32□□□□□ -0.6
SS18-210ENST00000578700 MAGEF1Q9HAY2 307 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms