RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 SLC38A10Q9HBR0 1119 aa10.19□□□□□ -0.78
CDK5RAP3-208ENST00000578525 RAVER2Q9HCJ3 691 aaKnown RBP10.19□□□□□ -0.78
CDK5RAP3-208ENST00000578525 KCNH7Q9NS40 1196 aa10.19□□□□□ -0.78
CDK5RAP3-208ENST00000578525 TBC1D22BQ9NU19 505 aa10.19□□□□□ -0.78
CDK5RAP3-208ENST00000578525 EHD2Q9NZN4 543 aa10.19□□□□□ -0.78
CDK5RAP3-208ENST00000578525 PKD2L1Q9P0L9 805 aa10.19□□□□□ -0.78
CDK5RAP3-208ENST00000578525 VPS18Q9P253 973 aa10.19□□□□□ -0.78
CDK5RAP3-208ENST00000578525 NAGPAQ9UK23 515 aa10.19□□□□□ -0.78
CDK5RAP3-208ENST00000578525 DNAJC12Q9UKB3 198 aa10.19□□□□□ -0.78
CDK5RAP3-208ENST00000578525 FAN1Q9Y2M0 1017 aa10.19□□□□□ -0.78
CDK5RAP3-208ENST00000578525 CTDP1Q9Y5B0 961 aaPredicted RBP10.19□□□□□ -0.78
CDK5RAP3-208ENST00000578525 NCANO14594 1321 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 ZC3H4Q9UPT8 1303 aaKnown RBP10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 F8VZ95 297 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 DDX3XO00571 662 aaKnown RBP eCLIP10.18□□□□□ -0.781e-8■■■□□ 15.4
CDK5RAP3-208ENST00000578525 EXOC3O60645 756 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 CTNND1O60716 968 aaKnown RBP10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 N4BP1O75113 896 aaKnown RBP10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 KIF4AO95239 1232 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 CCDC172P0C7W6 258 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 FDX1P10109 184 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 PLS3P13797 630 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 LMNB1P20700 586 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 RFX1P22670 979 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 RPS12P25398 132 aaKnown RBP10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 MATR3P43243 847 aaKnown RBP eCLIP10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 BAG6P46379 1132 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 QARSP47897 775 aaKnown RBP10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 JAK3P52333 1124 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 EPHB4P54760 987 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 NPEPPSP55786 919 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 TGFB2P61812 414 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 ITGB3BPQ13352 177 aaPredicted RBP10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 RPS6KA1Q15418 735 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 MUM1L1Q5H9M0 696 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 SND1Q7KZF4 910 aaKnown RBP eCLIP10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 U2AF1L4Q8WU68 220 aaKnown RBP10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 LMBR1Q8WVP7 490 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 JDP2Q8WYK2 163 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 VTI1AQ96AJ9 217 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 PBKQ96KB5 322 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 TAAR1Q96RJ0 339 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 TAOK3Q9H2K8 898 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 TMEM206Q9H813 350 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 RBM12Q9NTZ6 932 aaKnown RBP10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 PIM2Q9P1W9 311 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 STIM2Q9P246 746 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 LARSQ9P2J5 1176 aaKnown RBP10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 DMGDHQ9UI17 866 aaKnown RBP10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 ADAM21Q9UKJ8 722 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 PPP1R9AQ9ULJ8 1098 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 ZHX2Q9Y6X8 837 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 DOCK1Q14185 1865 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 FER1L6Q2WGJ9 1857 aa10.18□□□□□ -0.78
CDK5RAP3-208ENST00000578525 ERICH4A6NGS2 130 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 MAPK13O15264 365 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 P4HA2O15460 535 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 EVI5O60447 810 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 CLSTN1O94985 981 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 TRIM49P0CI25 452 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 TRIM49CP0CI26 452 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 NOP2P46087 812 aaKnown RBP10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 RARRES1P49788 294 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 SNRPFP62306 86 aaKnown RBP10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 TNNC1P63316 161 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 MRPS9P82933 396 aaKnown RBP10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 BFSP1Q12934 665 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 NNTQ13423 1086 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 MTMR1Q13613 665 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 DRAP1Q14919 205 aaPredicted RBP10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 PGM5Q15124 567 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 CBWD6Q4V339 395 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 CBWD3Q5JTY5 395 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 CBWD5Q5RIA9 395 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 XRRA1Q6P2D8 792 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 EMBQ6PCB8 327 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 POTEAQ6S8J7 498 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 C4orf19Q8IY42 314 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 SYCE1Q8N0S2 351 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 CPXCR1Q8N123 301 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 LRRC57Q8N9N7 239 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 TPCN2Q8NHX9 752 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 SLC30A5Q8TAD4 765 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 OLIG1Q8TAK6 271 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 LNX1Q8TBB1 728 aaPredicted RBP10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 HDAC7Q8WUI4 952 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 TMEM174Q8WUU8 243 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 CAVIN3Q969G5 261 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 MS4A14Q96JA4 679 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 CCDC43Q96MW1 224 aaKnown RBP10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 IWS1Q96ST2 819 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 SYT11Q9BT88 431 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 ST6GALNAC4Q9H4F1 302 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 ANKEF1Q9NU02 776 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 TCEAL9Q9UHQ7 104 aa10.17□□□□□ -0.78
CDK5RAP3-208ENST00000578525 ASTN2O75129 1339 aaPredicted RBP10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 SYF2O95926 243 aaKnown RBP10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 TMEM253P0C7T8 217 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 VCAM1P19320 739 aa10.16□□□□□ -0.78
CDK5RAP3-208ENST00000578525 EIF2AK2P19525 551 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms