RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 RFC5P40937 340 aa15.26■□□□□ 0.03
CSNK1D-208ENST00000578501 TOB1P50616 345 aaPredicted RBP15.26■□□□□ 0.03
CSNK1D-208ENST00000578501 GPC3P51654 580 aa15.26■□□□□ 0.03
CSNK1D-208ENST00000578501 NLRP11P59045 1033 aaKnown RBP15.26■□□□□ 0.03
CSNK1D-208ENST00000578501 CTTNQ14247 550 aaKnown RBP15.26■□□□□ 0.03
CSNK1D-208ENST00000578501 PLA2G4FQ68DD2 849 aa15.26■□□□□ 0.03
CSNK1D-208ENST00000578501 TPH2Q8IWU9 490 aa15.26■□□□□ 0.03
CSNK1D-208ENST00000578501 C4orf32Q8N8J7 132 aa15.26■□□□□ 0.03
CSNK1D-208ENST00000578501 SLC7A3Q8WY07 619 aa15.26■□□□□ 0.03
CSNK1D-208ENST00000578501 ARNTL2Q8WYA1 636 aa15.26■□□□□ 0.03
CSNK1D-208ENST00000578501 CEP170P1Q96L14 293 aa15.26■□□□□ 0.03
CSNK1D-208ENST00000578501 OSMRQ99650 979 aa15.26■□□□□ 0.03
CSNK1D-208ENST00000578501 TMX1Q9H3N1 280 aa15.26■□□□□ 0.03
CSNK1D-208ENST00000578501 DHX33Q9H6R0 707 aaKnown RBP15.26■□□□□ 0.03
CSNK1D-208ENST00000578501 LMCD1Q9NZU5 365 aa15.26■□□□□ 0.03
CSNK1D-208ENST00000578501 NOC2LQ9Y3T9 749 aaKnown RBP15.26■□□□□ 0.03
CSNK1D-208ENST00000578501 PRRC2BQ5JSZ5 2229 aaKnown RBP15.26■□□□□ 0.03
CSNK1D-208ENST00000578501 EVPLQ92817 2033 aa15.26■□□□□ 0.03
CSNK1D-208ENST00000578501 CHD7Q9P2D1 2997 aa15.25■□□□□ 0.03
CSNK1D-208ENST00000578501 FAM86C2PA6NEL3 165 aa15.25■□□□□ 0.03
CSNK1D-208ENST00000578501 LAD1O00515 517 aa15.25■□□□□ 0.03
CSNK1D-208ENST00000578501 GAS2O43903 313 aaKnown RBP15.25■□□□□ 0.03
CSNK1D-208ENST00000578501 ARHGEF15O94989 841 aa15.25■□□□□ 0.03
CSNK1D-208ENST00000578501 XRCC6P12956 609 aaKnown RBP eCLIP15.25■□□□□ 0.03
CSNK1D-208ENST00000578501 NPEPPSP55786 919 aa15.25■□□□□ 0.03
CSNK1D-208ENST00000578501 CYP4A11Q02928 519 aa15.25■□□□□ 0.03
CSNK1D-208ENST00000578501 NFX1Q12986 1120 aaKnown RBP15.25■□□□□ 0.03
CSNK1D-208ENST00000578501 DRP2Q13474 957 aa15.25■□□□□ 0.03
CSNK1D-208ENST00000578501 TMEM266Q2M3C6 531 aa15.25■□□□□ 0.03
CSNK1D-208ENST00000578501 RTN4RL1Q86UN2 441 aaPredicted RBP15.25■□□□□ 0.03
CSNK1D-208ENST00000578501 CRIPAKQ8N1N5 446 aa15.25■□□□□ 0.03
CSNK1D-208ENST00000578501 LINC01599Q8WXQ3 324 aa15.25■□□□□ 0.03
CSNK1D-208ENST00000578501 SH2D3AQ9BRG2 576 aa15.25■□□□□ 0.03
CSNK1D-208ENST00000578501 ANKEF1Q9NU02 776 aa15.25■□□□□ 0.03
CSNK1D-208ENST00000578501 RNF216Q9NWF9 866 aaPredicted RBP15.25■□□□□ 0.03
CSNK1D-208ENST00000578501 ST3GAL5Q9UNP4 418 aa15.25■□□□□ 0.03
CSNK1D-208ENST00000578501 COL4A6Q14031 1691 aa15.25■□□□□ 0.03
CSNK1D-208ENST00000578501 LINC01553A4QN01 128 aa15.24■□□□□ 0.03
CSNK1D-208ENST00000578501 POTEMA6NI47 508 aa15.24■□□□□ 0.03
CSNK1D-208ENST00000578501 UPP2O95045 317 aa15.24■□□□□ 0.03
CSNK1D-208ENST00000578501 TECP42680 631 aa15.24■□□□□ 0.03
CSNK1D-208ENST00000578501 FXR2P51116 673 aaKnown RBP eCLIP15.24■□□□□ 0.03
CSNK1D-208ENST00000578501 ERVK-21P61565 698 aa15.24■□□□□ 0.03
CSNK1D-208ENST00000578501 PDIA5Q14554 519 aa15.24■□□□□ 0.03
CSNK1D-208ENST00000578501 RILPL1Q5EBL4 403 aa15.24■□□□□ 0.03
CSNK1D-208ENST00000578501 LARP1BQ659C4 914 aaKnown RBP15.24■□□□□ 0.03
CSNK1D-208ENST00000578501 MCTP1Q6DN14 999 aa15.24■□□□□ 0.03
CSNK1D-208ENST00000578501 FAM117BQ6P1L5 589 aa15.24■□□□□ 0.03
CSNK1D-208ENST00000578501 ZNF410Q86VK4 478 aa15.24■□□□□ 0.03
CSNK1D-208ENST00000578501 FAM228AQ86W67 206 aa15.24■□□□□ 0.03
CSNK1D-208ENST00000578501 KHSRPQ92945 711 aaKnown RBP eCLIP15.24■□□□□ 0.03
CSNK1D-208ENST00000578501 INTS4Q96HW7 963 aaKnown RBP15.24■□□□□ 0.03
CSNK1D-208ENST00000578501 PPP1R16BQ96T49 567 aa15.24■□□□□ 0.03
CSNK1D-208ENST00000578501 YME1L1Q96TA2 773 aa15.24■□□□□ 0.03
CSNK1D-208ENST00000578501 POLR3CQ9BUI4 534 aaPredicted RBP15.24■□□□□ 0.03
CSNK1D-208ENST00000578501 TUFT1Q9NNX1 390 aa15.24■□□□□ 0.03
CSNK1D-208ENST00000578501 RGS18Q9NS28 235 aa15.24■□□□□ 0.03
CSNK1D-208ENST00000578501 C1orf112Q9NSG2 853 aa15.24■□□□□ 0.03
CSNK1D-208ENST00000578501 SUCLA2Q9P2R7 463 aaPredicted RBP15.24■□□□□ 0.03
CSNK1D-208ENST00000578501 PCDHB6Q9Y5E3 794 aa15.24■□□□□ 0.03
CSNK1D-208ENST00000578501 EPOPA6NHQ4 379 aa15.23■□□□□ 0.03
CSNK1D-208ENST00000578501 SPATA31C1P0DKV0 1188 aa15.23■□□□□ 0.03
CSNK1D-208ENST00000578501 ALADP13716 330 aa15.23■□□□□ 0.03
CSNK1D-208ENST00000578501 DARSP14868 501 aaKnown RBP15.23■□□□□ 0.03
CSNK1D-208ENST00000578501 MUTP22033 750 aa15.23■□□□□ 0.03
CSNK1D-208ENST00000578501 RPA1P27694 616 aa15.23■□□□□ 0.03
CSNK1D-208ENST00000578501 MRE11P49959 708 aa15.23■□□□□ 0.03
CSNK1D-208ENST00000578501 POLGP54098 1239 aaPredicted RBP15.23■□□□□ 0.03
CSNK1D-208ENST00000578501 PTGDRQ13258 359 aa15.23■□□□□ 0.03
CSNK1D-208ENST00000578501 GRB10Q13322 594 aa15.23■□□□□ 0.03
CSNK1D-208ENST00000578501 XKR9Q5GH70 373 aa15.23■□□□□ 0.03
CSNK1D-208ENST00000578501 NPAS4Q8IUM7 802 aa15.23■□□□□ 0.03
CSNK1D-208ENST00000578501 ZNF579Q8NAF0 562 aaKnown RBP15.23■□□□□ 0.03
CSNK1D-208ENST00000578501 ERMNQ8TAM6 284 aa15.23■□□□□ 0.03
CSNK1D-208ENST00000578501 TCP11Q8WWU5 503 aa15.23■□□□□ 0.03
CSNK1D-208ENST00000578501 NLRP7Q8WX94 980 aa15.23■□□□□ 0.03
CSNK1D-208ENST00000578501 TGS1Q96RS0 853 aaKnown RBP15.23■□□□□ 0.03
CSNK1D-208ENST00000578501 GCOM2Q9BZD3 368 aaPredicted RBP15.23■□□□□ 0.03
CSNK1D-208ENST00000578501 KCNH6Q9H252 994 aa15.23■□□□□ 0.03
CSNK1D-208ENST00000578501 RC3H2Q9HBD1 1191 aaKnown RBP15.23■□□□□ 0.03
CSNK1D-208ENST00000578501 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.23■□□□□ 0.03
CSNK1D-208ENST00000578501 STK24Q9Y6E0 443 aa15.23■□□□□ 0.03
CSNK1D-208ENST00000578501 MUC6Q6W4X9 2439 aa15.23■□□□□ 0.03
CSNK1D-208ENST00000578501 TTC3P53804 2025 aa15.22■□□□□ 0.03
CSNK1D-208ENST00000578501 DENND3A2RUS2 1198 aa15.22■□□□□ 0.03
CSNK1D-208ENST00000578501 ZBTB39O15060 712 aa15.22■□□□□ 0.03
CSNK1D-208ENST00000578501 ASAP2O43150 1006 aa15.22■□□□□ 0.03
CSNK1D-208ENST00000578501 MGEA5O60502 916 aa15.22■□□□□ 0.03
CSNK1D-208ENST00000578501 DGKIO75912 1065 aa15.22■□□□□ 0.03
CSNK1D-208ENST00000578501 STAG3L1P0CL83 205 aa15.22■□□□□ 0.03
CSNK1D-208ENST00000578501 PDCP20941 246 aa15.22■□□□□ 0.03
CSNK1D-208ENST00000578501 PRPHP41219 470 aa15.22■□□□□ 0.03
CSNK1D-208ENST00000578501 SARSP49591 514 aaKnown RBP15.22■□□□□ 0.03
CSNK1D-208ENST00000578501 FAM189BP81408 668 aa15.22■□□□□ 0.03
CSNK1D-208ENST00000578501 DSC3Q14574 896 aa15.22■□□□□ 0.03
CSNK1D-208ENST00000578501 NBR1Q14596 966 aa15.22■□□□□ 0.03
CSNK1D-208ENST00000578501 CSPP1Q1MSJ5 1256 aa15.22■□□□□ 0.03
CSNK1D-208ENST00000578501 SLC24A5Q71RS6 500 aa15.22■□□□□ 0.03
CSNK1D-208ENST00000578501 CATSPER3Q86XQ3 398 aa15.22■□□□□ 0.03
CSNK1D-208ENST00000578501 PSPC1Q8WXF1 523 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms