RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 KIAA1671Q9BY89 1806 aa16.04■□□□□ 0.16
SMARCD2-205ENST00000577686 PRPF3O43395 683 aaKnown RBP16.04■□□□□ 0.16
SMARCD2-205ENST00000577686 GAS7O60861 476 aa16.04■□□□□ 0.16
SMARCD2-205ENST00000577686 EOMESO95936 686 aa16.04■□□□□ 0.16
SMARCD2-205ENST00000577686 SKIP12755 728 aa16.04■□□□□ 0.16
SMARCD2-205ENST00000577686 CDC27P30260 824 aa16.04■□□□□ 0.16
SMARCD2-205ENST00000577686 DNM2P50570 870 aa16.04■□□□□ 0.16
SMARCD2-205ENST00000577686 TBC1D8BQ0IIM8 1120 aa16.04■□□□□ 0.16
SMARCD2-205ENST00000577686 COL9A3Q14050 684 aaPredicted RBP16.04■□□□□ 0.16
SMARCD2-205ENST00000577686 DSC3Q14574 896 aa16.04■□□□□ 0.16
SMARCD2-205ENST00000577686 ANKRD54Q6NXT1 300 aa16.04■□□□□ 0.16
SMARCD2-205ENST00000577686 CENPQQ7L2Z9 268 aaPredicted RBP16.04■□□□□ 0.16
SMARCD2-205ENST00000577686 ECHDC2Q86YB7 292 aa16.04■□□□□ 0.16
SMARCD2-205ENST00000577686 RNF169Q8NCN4 708 aa16.04■□□□□ 0.16
SMARCD2-205ENST00000577686 RDM1Q8NG50 284 aa16.04■□□□□ 0.16
SMARCD2-205ENST00000577686 NLRP7Q8WX94 980 aa16.04■□□□□ 0.16
SMARCD2-205ENST00000577686 SUSD6Q92537 303 aa16.04■□□□□ 0.16
SMARCD2-205ENST00000577686 TEKT3Q9BXF9 490 aa16.04■□□□□ 0.16
SMARCD2-205ENST00000577686 CWH43Q9H720 699 aa16.04■□□□□ 0.16
SMARCD2-205ENST00000577686 DISC1Q9NRI5 854 aa16.04■□□□□ 0.16
SMARCD2-205ENST00000577686 PCDHGC5Q9Y5F6 944 aa16.04■□□□□ 0.16
SMARCD2-205ENST00000577686 ATP4AP20648 1035 aa16.03■□□□□ 0.16
SMARCD2-205ENST00000577686 PSMA5P28066 241 aa16.03■□□□□ 0.16
SMARCD2-205ENST00000577686 CA8P35219 290 aa16.03■□□□□ 0.16
SMARCD2-205ENST00000577686 ADD1P35611 737 aaKnown RBP16.03■□□□□ 0.16
SMARCD2-205ENST00000577686 ERVFC1P60507 584 aa16.03■□□□□ 0.16
SMARCD2-205ENST00000577686 PRKCEQ02156 737 aa16.03■□□□□ 0.16
SMARCD2-205ENST00000577686 PTPN21Q16825 1174 aa16.03■□□□□ 0.16
SMARCD2-205ENST00000577686 Q6ZUG5 572 aa16.03■□□□□ 0.16
SMARCD2-205ENST00000577686 TRIM22Q8IYM9 498 aa16.03■□□□□ 0.16
SMARCD2-205ENST00000577686 BRF1Q92994 677 aa16.03■□□□□ 0.16
SMARCD2-205ENST00000577686 RNF26Q9BY78 433 aaPredicted RBP16.03■□□□□ 0.16
SMARCD2-205ENST00000577686 GCOM2Q9BZD3 368 aaPredicted RBP16.03■□□□□ 0.16
SMARCD2-205ENST00000577686 INO80BQ9C086 356 aaPredicted RBP16.03■□□□□ 0.16
SMARCD2-205ENST00000577686 FAM217BQ9NTX9 383 aaPredicted RBP16.03■□□□□ 0.16
SMARCD2-205ENST00000577686 NID2Q14112 1375 aa16.02■□□□□ 0.16
SMARCD2-205ENST00000577686 DARSP14868 501 aaKnown RBP16.02■□□□□ 0.16
SMARCD2-205ENST00000577686 SFPQP23246 707 aaKnown RBP eCLIP16.02■□□□□ 0.16
SMARCD2-205ENST00000577686 ALDH7A1P49419 539 aaKnown RBP16.02■□□□□ 0.16
SMARCD2-205ENST00000577686 USP11P51784 963 aa16.02■□□□□ 0.16
SMARCD2-205ENST00000577686 NUBP1P53384 320 aa16.02■□□□□ 0.16
SMARCD2-205ENST00000577686 ITIH3Q06033 890 aa16.02■□□□□ 0.16
SMARCD2-205ENST00000577686 APOBRQ0VD83 1088 aa16.02■□□□□ 0.16
SMARCD2-205ENST00000577686 GIT2Q14161 759 aa16.02■□□□□ 0.16
SMARCD2-205ENST00000577686 ADCK5Q3MIX3 580 aa16.02■□□□□ 0.16
SMARCD2-205ENST00000577686 LRCH2Q5VUJ6 765 aa16.02■□□□□ 0.16
SMARCD2-205ENST00000577686 LLGL2Q6P1M3 1020 aa16.02■□□□□ 0.16
SMARCD2-205ENST00000577686 RASEFQ8IZ41 740 aa16.02■□□□□ 0.16
SMARCD2-205ENST00000577686 TMEM169Q96HH4 297 aa16.02■□□□□ 0.16
SMARCD2-205ENST00000577686 CCDC136Q96JN2 1154 aa16.02■□□□□ 0.16
SMARCD2-205ENST00000577686 RIPOR3Q96MK2 946 aa16.02■□□□□ 0.16
SMARCD2-205ENST00000577686 JAKMIP1Q96N16 626 aaKnown RBP16.02■□□□□ 0.16
SMARCD2-205ENST00000577686 CASD1Q96PB1 797 aa16.02■□□□□ 0.16
SMARCD2-205ENST00000577686 JPH2Q9BR39 696 aaPredicted RBP16.02■□□□□ 0.16
SMARCD2-205ENST00000577686 SH3GLB2Q9NR46 395 aa16.02■□□□□ 0.16
SMARCD2-205ENST00000577686 CHST12Q9NRB3 414 aa16.02■□□□□ 0.16
SMARCD2-205ENST00000577686 DZANK1Q9NVP4 752 aa16.02■□□□□ 0.16
SMARCD2-205ENST00000577686 STK39Q9UEW8 545 aa16.02■□□□□ 0.16
SMARCD2-205ENST00000577686 MYO7AQ13402 2215 aa16.02■□□□□ 0.15
SMARCD2-205ENST00000577686 A0A0U1RQF3 1178 aa16.01■□□□□ 0.15
SMARCD2-205ENST00000577686 MTHFRP42898 656 aa16.01■□□□□ 0.15
SMARCD2-205ENST00000577686 GPC3P51654 580 aa16.01■□□□□ 0.15
SMARCD2-205ENST00000577686 LRRC71Q8N4P6 559 aa16.01■□□□□ 0.15
SMARCD2-205ENST00000577686 ADAMTS10Q9H324 1103 aa16.01■□□□□ 0.15
SMARCD2-205ENST00000577686 CHMP2AO43633 222 aa16■□□□□ 0.15
SMARCD2-205ENST00000577686 DKC1O60832 514 aaKnown RBP eCLIP16■□□□□ 0.15
SMARCD2-205ENST00000577686 NLRP5P59047 1200 aa16■□□□□ 0.15
SMARCD2-205ENST00000577686 XKR3Q5GH77 459 aa16■□□□□ 0.15
SMARCD2-205ENST00000577686 CPLX2Q6PUV4 134 aaKnown RBP16■□□□□ 0.15
SMARCD2-205ENST00000577686 UBALD2Q8IYN6 164 aa16■□□□□ 0.15
SMARCD2-205ENST00000577686 FAM177A1Q8N128 213 aaPredicted RBP16■□□□□ 0.15
SMARCD2-205ENST00000577686 FBXL16Q8N461 479 aa16■□□□□ 0.15
SMARCD2-205ENST00000577686 LINC01465Q8N7H1 131 aa16■□□□□ 0.15
SMARCD2-205ENST00000577686 VN1R2Q8NFZ6 395 aa16■□□□□ 0.15
SMARCD2-205ENST00000577686 SLC26A6Q9BXS9 759 aa16■□□□□ 0.15
SMARCD2-205ENST00000577686 TSHZ2Q9NRE2 1034 aa16■□□□□ 0.15
SMARCD2-205ENST00000577686 SEPT9Q9UHD8 586 aaPredicted RBP16■□□□□ 0.15
SMARCD2-205ENST00000577686 PLXNA4Q9HCM2 1894 aa15.99■□□□□ 0.15
SMARCD2-205ENST00000577686 MSH4O15457 936 aa15.99■□□□□ 0.15
SMARCD2-205ENST00000577686 REC8O95072 547 aa15.99■□□□□ 0.15
SMARCD2-205ENST00000577686 IFNAR1P17181 557 aa15.99■□□□□ 0.15
SMARCD2-205ENST00000577686 RAB27AP51159 221 aa15.99■□□□□ 0.15
SMARCD2-205ENST00000577686 MTMR3Q13615 1198 aa15.99■□□□□ 0.15
SMARCD2-205ENST00000577686 GLB1LQ6UWU2 654 aa15.99■□□□□ 0.15
SMARCD2-205ENST00000577686 MIER3Q7Z3K6 550 aa15.99■□□□□ 0.15
SMARCD2-205ENST00000577686 ZNF410Q86VK4 478 aa15.99■□□□□ 0.15
SMARCD2-205ENST00000577686 EXOC8Q8IYI6 725 aa15.99■□□□□ 0.15
SMARCD2-205ENST00000577686 SLC39A11Q8N1S5 342 aa15.99■□□□□ 0.15
SMARCD2-205ENST00000577686 MRPL43Q8N983 215 aaKnown RBP15.99■□□□□ 0.15
SMARCD2-205ENST00000577686 HELQQ8TDG4 1101 aa15.99■□□□□ 0.15
SMARCD2-205ENST00000577686 SLC5A5Q92911 643 aa15.99■□□□□ 0.15
SMARCD2-205ENST00000577686 PHKBQ93100 1093 aa15.99■□□□□ 0.15
SMARCD2-205ENST00000577686 S1PR5Q9H228 398 aa15.99■□□□□ 0.15
SMARCD2-205ENST00000577686 HCSTQ9UBK5 93 aa15.99■□□□□ 0.15
SMARCD2-205ENST00000577686 FNDC1Q4ZHG4 1894 aaPredicted RBP15.99■□□□□ 0.15
SMARCD2-205ENST00000577686 SPDYE4A6NLX3 237 aa15.98■□□□□ 0.15
SMARCD2-205ENST00000577686 CPLX1O14810 134 aa15.98■□□□□ 0.15
SMARCD2-205ENST00000577686 POLGP54098 1239 aaPredicted RBP15.98■□□□□ 0.15
SMARCD2-205ENST00000577686 KCNC3Q14003 757 aa15.98■□□□□ 0.15
SMARCD2-205ENST00000577686 MTERF2Q49AM1 385 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms