RNA–Protein interactions for RNA: ENST00000577101.5

NDE1-212, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-212ENST00000577101 MCM6Q14566 821 aa10.9□□□□□ -0.66
NDE1-212ENST00000577101 ATL3Q6DD88 541 aa10.9□□□□□ -0.66
NDE1-212ENST00000577101 RINT1Q6NUQ1 792 aa10.9□□□□□ -0.66
NDE1-212ENST00000577101 PADI6Q6TGC4 694 aa10.9□□□□□ -0.66
NDE1-212ENST00000577101 MAEAQ7L5Y9 396 aa10.9□□□□□ -0.66
NDE1-212ENST00000577101 OTUD6AQ7L8S5 288 aa10.9□□□□□ -0.66
NDE1-212ENST00000577101 FAM228AQ86W67 206 aa10.9□□□□□ -0.66
NDE1-212ENST00000577101 NME8Q8N427 588 aa10.9□□□□□ -0.66
NDE1-212ENST00000577101 CCDC155Q8N6L0 562 aa10.9□□□□□ -0.66
NDE1-212ENST00000577101 SYT2Q8N9I0 419 aaPredicted RBP10.9□□□□□ -0.66
NDE1-212ENST00000577101 RETREG2Q8NC44 543 aa10.9□□□□□ -0.66
NDE1-212ENST00000577101 TNPO1Q92973 898 aaKnown RBP10.9□□□□□ -0.66
NDE1-212ENST00000577101 MTRQ99707 1265 aa10.9□□□□□ -0.66
NDE1-212ENST00000577101 FDXACB1Q9BRP7 624 aaPredicted RBP10.9□□□□□ -0.66
NDE1-212ENST00000577101 RAB34Q9BZG1 259 aa10.9□□□□□ -0.66
NDE1-212ENST00000577101 UBE2OQ9C0C9 1292 aaKnown RBP10.9□□□□□ -0.66
NDE1-212ENST00000577101 MINDY3Q9H8M7 445 aa10.9□□□□□ -0.66
NDE1-212ENST00000577101 IFT122Q9HBG6 1241 aa10.9□□□□□ -0.66
NDE1-212ENST00000577101 ERVK-5Q9HDB9 667 aa10.9□□□□□ -0.66
NDE1-212ENST00000577101 SUCLA2Q9P2R7 463 aaPredicted RBP10.9□□□□□ -0.66
NDE1-212ENST00000577101 PPME1Q9Y570 386 aa10.9□□□□□ -0.66
NDE1-212ENST00000577101 ADGRA3Q8IWK6 1321 aa10.89□□□□□ -0.67
NDE1-212ENST00000577101 SOX1O00570 391 aaPredicted RBP10.89□□□□□ -0.67
NDE1-212ENST00000577101 DGAT1O75907 488 aa10.89□□□□□ -0.67
NDE1-212ENST00000577101 CYP11B2P19099 503 aa10.89□□□□□ -0.67
NDE1-212ENST00000577101 CD52P31358 61 aa10.89□□□□□ -0.67
NDE1-212ENST00000577101 RFC2P35250 354 aa10.89□□□□□ -0.67
NDE1-212ENST00000577101 POLGP54098 1239 aaPredicted RBP10.89□□□□□ -0.67
NDE1-212ENST00000577101 DEFB103AP81534 67 aa10.89□□□□□ -0.67
NDE1-212ENST00000577101 CAPSQ13938 189 aa10.89□□□□□ -0.67
NDE1-212ENST00000577101 ZRSR1Q15695 479 aaKnown RBP10.89□□□□□ -0.67
NDE1-212ENST00000577101 RESP18Q5W5W9 173 aa10.89□□□□□ -0.67
NDE1-212ENST00000577101 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.89□□□□□ -0.67
NDE1-212ENST00000577101 OTOP2Q7RTS6 562 aa10.89□□□□□ -0.67
NDE1-212ENST00000577101 TMCO2Q7Z6W1 182 aaPredicted RBP10.89□□□□□ -0.67
NDE1-212ENST00000577101 RHPN2Q8IUC4 686 aa10.89□□□□□ -0.67
NDE1-212ENST00000577101 PRPF31Q8WWY3 499 aaKnown RBP10.89□□□□□ -0.67
NDE1-212ENST00000577101 HERVK_113Q902F9 699 aa10.89□□□□□ -0.67
NDE1-212ENST00000577101 RAD54LQ92698 747 aa10.89□□□□□ -0.67
NDE1-212ENST00000577101 LBHD1Q9BQE6 289 aaPredicted RBP10.89□□□□□ -0.67
NDE1-212ENST00000577101 PANK2Q9BZ23 570 aa10.89□□□□□ -0.67
NDE1-212ENST00000577101 POLR3FQ9H1D9 316 aaPredicted RBP10.89□□□□□ -0.67
NDE1-212ENST00000577101 GOLPH3LQ9H4A5 285 aa10.89□□□□□ -0.67
NDE1-212ENST00000577101 ATP6V0A4Q9HBG4 840 aa10.89□□□□□ -0.67
NDE1-212ENST00000577101 CIZ1Q9ULV3 898 aaPredicted RBP10.89□□□□□ -0.67
NDE1-212ENST00000577101 AKT3Q9Y243 479 aa10.89□□□□□ -0.67
NDE1-212ENST00000577101 TTC3P53804 2025 aa10.89□□□□□ -0.67
NDE1-212ENST00000577101 TTLL13PA6NNM8 815 aa10.88□□□□□ -0.67
NDE1-212ENST00000577101 GRXCR1A8MXD5 290 aa10.88□□□□□ -0.67
NDE1-212ENST00000577101 SLC26A4O43511 780 aa10.88□□□□□ -0.67
NDE1-212ENST00000577101 PLA2G4BP0C869 781 aa10.88□□□□□ -0.67
NDE1-212ENST00000577101 UBA7P41226 1012 aa10.88□□□□□ -0.67
NDE1-212ENST00000577101 CRYBB1P53674 252 aaPredicted RBP10.88□□□□□ -0.67
NDE1-212ENST00000577101 KRT85P78386 507 aa10.88□□□□□ -0.67
NDE1-212ENST00000577101 CACNB1Q02641 598 aaPredicted RBP10.88□□□□□ -0.67
NDE1-212ENST00000577101 LAMTOR4Q0VGL1 99 aa10.88□□□□□ -0.67
NDE1-212ENST00000577101 DSC3Q14574 896 aa10.88□□□□□ -0.67
NDE1-212ENST00000577101 IER5Q5VY09 327 aa10.88□□□□□ -0.67
NDE1-212ENST00000577101 CNKSR3Q6P9H4 555 aa10.88□□□□□ -0.67
NDE1-212ENST00000577101 TSHZ1Q6ZSZ6 1077 aa10.88□□□□□ -0.67
NDE1-212ENST00000577101 TDHQ8IZJ6 230 aa10.88□□□□□ -0.67
NDE1-212ENST00000577101 CRIPAKQ8N1N5 446 aa10.88□□□□□ -0.67
NDE1-212ENST00000577101 KCNG4Q8TDN1 519 aa10.88□□□□□ -0.67
NDE1-212ENST00000577101 SLC7A3Q8WY07 619 aa10.88□□□□□ -0.67
NDE1-212ENST00000577101 IPO9Q96P70 1041 aaKnown RBP10.88□□□□□ -0.67
NDE1-212ENST00000577101 CFAP45Q9UL16 551 aa10.88□□□□□ -0.67
NDE1-212ENST00000577101 PADI3Q9ULW8 664 aa10.88□□□□□ -0.67
NDE1-212ENST00000577101 DNM3Q9UQ16 869 aa10.88□□□□□ -0.67
NDE1-212ENST00000577101 GINS2Q9Y248 185 aa10.88□□□□□ -0.67
NDE1-212ENST00000577101 HPSEQ9Y251 543 aa10.88□□□□□ -0.67
NDE1-212ENST00000577101 COL4A3BPQ9Y5P4 624 aa10.88□□□□□ -0.67
NDE1-212ENST00000577101 STK24Q9Y6E0 443 aa10.88□□□□□ -0.67
NDE1-212ENST00000577101 ATG2AQ2TAZ0 1938 aa10.88□□□□□ -0.67
NDE1-212ENST00000577101 NLRC5Q86WI3 1866 aa10.87□□□□□ -0.67
NDE1-212ENST00000577101 RANBP2P49792 3224 aaKnown RBP10.87□□□□□ -0.67
NDE1-212ENST00000577101 FAM237AA0A1B0GTK4 181 aa10.87□□□□□ -0.67
NDE1-212ENST00000577101 ARHGEF35A5YM69 484 aa10.87□□□□□ -0.67
NDE1-212ENST00000577101 MYMKA6NI61 221 aa10.87□□□□□ -0.67
NDE1-212ENST00000577101 HIP1RO75146 1068 aa10.87□□□□□ -0.67
NDE1-212ENST00000577101 ARHGEF15O94989 841 aa10.87□□□□□ -0.67
NDE1-212ENST00000577101 FGBP02675 491 aa10.87□□□□□ -0.67
NDE1-212ENST00000577101 DARSP14868 501 aaKnown RBP10.87□□□□□ -0.67
NDE1-212ENST00000577101 NCLP19338 710 aaKnown RBP10.87□□□□□ -0.67
NDE1-212ENST00000577101 WDR5P61964 334 aaKnown RBP10.87□□□□□ -0.67
NDE1-212ENST00000577101 RAD51AP2Q09MP3 1159 aa10.87□□□□□ -0.67
NDE1-212ENST00000577101 AMHR2Q16671 573 aa10.87□□□□□ -0.67
NDE1-212ENST00000577101 TAS1R3Q7RTX0 852 aa10.87□□□□□ -0.67
NDE1-212ENST00000577101 RSPH3Q86UC2 560 aa10.87□□□□□ -0.67
NDE1-212ENST00000577101 IFNLR1Q8IU57 520 aaPredicted RBP10.87□□□□□ -0.67
NDE1-212ENST00000577101 PDILTQ8N807 584 aa10.87□□□□□ -0.67
NDE1-212ENST00000577101 STAMQ92783 540 aa10.87□□□□□ -0.67
NDE1-212ENST00000577101 SPATA32Q96LK8 384 aa10.87□□□□□ -0.67
NDE1-212ENST00000577101 NLRP4Q96MN2 994 aa10.87□□□□□ -0.67
NDE1-212ENST00000577101 FIZ1Q96SL8 496 aa10.87□□□□□ -0.67
NDE1-212ENST00000577101 KIFC3Q9BVG8 833 aa10.87□□□□□ -0.67
NDE1-212ENST00000577101 IFIH1Q9BYX4 1025 aaKnown RBP10.87□□□□□ -0.67
NDE1-212ENST00000577101 NT5C3AQ9H0P0 336 aa10.87□□□□□ -0.67
NDE1-212ENST00000577101 CHMP5Q9NZZ3 219 aa10.87□□□□□ -0.67
NDE1-212ENST00000577101 SQORQ9Y6N5 450 aa10.87□□□□□ -0.67
NDE1-212ENST00000577101 A0A1B0GVL5 298 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms