RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 LAMA4Q16363 1823 aa7.24□□□□□ -1.25
NUP88-212ENST00000576708 SORBS3O60504 671 aa7.24□□□□□ -1.25
NUP88-212ENST00000576708 PPP1R11O60927 126 aaPredicted RBP7.24□□□□□ -1.25
NUP88-212ENST00000576708 PARP1P09874 1014 aaKnown RBP7.24□□□□□ -1.25
NUP88-212ENST00000576708 ACPPP15309 386 aa7.24□□□□□ -1.25
NUP88-212ENST00000576708 CPT1AP50416 773 aa7.24□□□□□ -1.25
NUP88-212ENST00000576708 NRLP54845 237 aa7.24□□□□□ -1.25
NUP88-212ENST00000576708 PTH1RQ03431 593 aa7.24□□□□□ -1.25
NUP88-212ENST00000576708 ARHGAP1Q07960 439 aa7.24□□□□□ -1.25
NUP88-212ENST00000576708 SEC23AQ15436 765 aa7.24□□□□□ -1.25
NUP88-212ENST00000576708 CCDC85BQ15834 202 aaPredicted RBP7.24□□□□□ -1.25
NUP88-212ENST00000576708 IMMTQ16891 758 aaKnown RBP7.24□□□□□ -1.25
NUP88-212ENST00000576708 ASPRV1Q53RT3 343 aa7.24□□□□□ -1.25
NUP88-212ENST00000576708 CCDC62Q6P9F0 684 aa7.24□□□□□ -1.25
NUP88-212ENST00000576708 CHSY3Q70JA7 882 aa7.24□□□□□ -1.25
NUP88-212ENST00000576708 FBXO11Q86XK2 927 aa7.24□□□□□ -1.25
NUP88-212ENST00000576708 RGS22Q8NE09 1264 aa7.24□□□□□ -1.25
NUP88-212ENST00000576708 DNERQ8NFT8 737 aa7.24□□□□□ -1.25
NUP88-212ENST00000576708 SCFD2Q8WU76 684 aa7.24□□□□□ -1.25
NUP88-212ENST00000576708 NUDT8Q8WV74 236 aa7.24□□□□□ -1.25
NUP88-212ENST00000576708 AFG1LQ8WV93 481 aa7.24□□□□□ -1.25
NUP88-212ENST00000576708 BTBD6Q96KE9 485 aa7.24□□□□□ -1.25
NUP88-212ENST00000576708 STARD13Q9Y3M8 1113 aa7.24□□□□□ -1.25
NUP88-212ENST00000576708 ABCB11O95342 1321 aa7.24□□□□□ -1.25
NUP88-212ENST00000576708 LOC102724159A0A0B4J2E5 919 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 PNMA6FA0A0J9YX94 578 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 KLRF2D3W0D1 207 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 RFXAPO00287 272 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 HIP1O00291 1037 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 EIF1AYO14602 144 aaKnown RBP7.23□□□□□ -1.25
NUP88-212ENST00000576708 NKRFO15226 690 aaKnown RBP eCLIP7.23□□□□□ -1.25
NUP88-212ENST00000576708 ARHGEF15O94989 841 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 CFBP00751 764 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 ALBP02768 609 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 P4HBP07237 508 aaKnown RBP7.23□□□□□ -1.25
NUP88-212ENST00000576708 HOXA13P31271 388 aaPredicted RBP7.23□□□□□ -1.25
NUP88-212ENST00000576708 SOX18P35713 384 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 HYAL2Q12891 473 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 PWP2Q15269 919 aaKnown RBP7.23□□□□□ -1.25
NUP88-212ENST00000576708 RAB30Q15771 203 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 CCDC178Q5BJE1 867 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 PERM1Q5SV97 790 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 IFIT1BQ5T764 474 aaKnown RBP7.23□□□□□ -1.25
NUP88-212ENST00000576708 TTC22Q5TAA0 569 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 ARHGEF16Q5VV41 709 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 GDF6Q6KF10 455 aaPredicted RBP7.23□□□□□ -1.25
NUP88-212ENST00000576708 PSAPL1Q6NUJ1 521 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 C8orf86Q6ZUL3 223 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 RPUSD2Q8IZ73 545 aaKnown RBP7.23□□□□□ -1.25
NUP88-212ENST00000576708 PIBF1Q8WXW3 757 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 KAT2BQ92831 832 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 ALKBH8Q96BT7 664 aaKnown RBP7.23□□□□□ -1.25
NUP88-212ENST00000576708 CTAGE1Q96RT6 745 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 RMDN3Q96TC7 470 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 MPHOSPH6Q99547 160 aaKnown RBP7.23□□□□□ -1.25
NUP88-212ENST00000576708 UBAC1Q9BSL1 405 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 KRT23Q9C075 422 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 CERS4Q9HA82 394 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 LATS2Q9NRM7 1088 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 CTNNA3Q9UI47 895 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 MAD2L2Q9UI95 211 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 MSRAQ9UJ68 235 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 PNMA2Q9UL42 364 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 MRPL11Q9Y3B7 192 aaKnown RBP7.23□□□□□ -1.25
NUP88-212ENST00000576708 SLC4A7Q9Y6M7 1214 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 CDH23Q9H251 3354 aa7.23□□□□□ -1.25
NUP88-212ENST00000576708 SCN5AQ14524 2016 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 GBF1Q92538 1859 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 KPNA6O60684 536 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 CPNE3O75131 537 aaKnown RBP7.22□□□□□ -1.25
NUP88-212ENST00000576708 GH1P01241 217 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 GHRHP01286 108 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 MMP3P08254 477 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 CYP21A2P08686 494 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 IQCF3P0C7M6 154 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 SUPT20HL2P0C7V6 817 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 MYCLP12524 364 aaPredicted RBP7.22□□□□□ -1.25
NUP88-212ENST00000576708 ATP2A2P16615 1042 aaKnown RBP7.22□□□□□ -1.25
NUP88-212ENST00000576708 CHMLP26374 656 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 ATP11AP98196 1134 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 GPNMBQ14956 572 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 STXBP2Q15833 593 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 TCTN1Q2MV58 587 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 BRDTQ58F21 947 aaPredicted RBP7.22□□□□□ -1.25
NUP88-212ENST00000576708 NFRKBQ6P4R8 1299 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 STOX1Q6ZVD7 989 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 SPRED2Q7Z698 418 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 TMCO2Q7Z6W1 182 aaPredicted RBP7.22□□□□□ -1.25
NUP88-212ENST00000576708 HOMER1Q86YM7 354 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 IL31RAQ8NI17 732 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 NSUN6Q8TEA1 469 aaKnown RBP7.22□□□□□ -1.25
NUP88-212ENST00000576708 DHX38Q92620 1227 aaKnown RBP7.22□□□□□ -1.25
NUP88-212ENST00000576708 PIGSQ96S52 555 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 ALG1Q9BT22 464 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 AMNQ9BXJ7 453 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 SEZ6LQ9BYH1 1024 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 FTOQ9C0B1 505 aaKnown RBP eCLIP7.22□□□□□ -1.25
NUP88-212ENST00000576708 MTIF3Q9H2K0 278 aaKnown RBP7.22□□□□□ -1.25
NUP88-212ENST00000576708 BCAS3Q9H6U6 928 aa7.22□□□□□ -1.25
NUP88-212ENST00000576708 CNNM2Q9H8M5 875 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms