RNA–Protein interactions for RNA: ENST00000575346.1

USP43-206, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 5

Gene USP43, Length 711 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-206ENST00000575346 PTPROQ16827 1216 aa13.42□□□□□ -0.26
USP43-206ENST00000575346 NAALADL2Q58DX5 795 aa13.42□□□□□ -0.26
USP43-206ENST00000575346 ZNF410Q86VK4 478 aa13.42□□□□□ -0.26
USP43-206ENST00000575346 NEK9Q8TD19 979 aa13.42□□□□□ -0.26
USP43-206ENST00000575346 P2RX5Q93086 422 aa13.42□□□□□ -0.26
USP43-206ENST00000575346 PPP1R16BQ96T49 567 aa13.42□□□□□ -0.26
USP43-206ENST00000575346 HSD17B14Q9BPX1 270 aa13.42□□□□□ -0.26
USP43-206ENST00000575346 LXNQ9BS40 222 aa13.42□□□□□ -0.26
USP43-206ENST00000575346 LMAN2LQ9H0V9 348 aa13.42□□□□□ -0.26
USP43-206ENST00000575346 FOXP1Q9H334 677 aaPredicted RBP13.42□□□□□ -0.26
USP43-206ENST00000575346 DHX33Q9H6R0 707 aaKnown RBP13.42□□□□□ -0.26
USP43-206ENST00000575346 ZSWIM4Q9H7M6 989 aa13.42□□□□□ -0.26
USP43-206ENST00000575346 PCDHA12Q9UN75 941 aa13.42□□□□□ -0.26
USP43-206ENST00000575346 PCDHB7Q9Y5E2 793 aa13.42□□□□□ -0.26
USP43-206ENST00000575346 DENND3A2RUS2 1198 aa13.41□□□□□ -0.26
USP43-206ENST00000575346 NEMFO60524 1076 aa13.41□□□□□ -0.26
USP43-206ENST00000575346 SLITRK3O94933 977 aa13.41□□□□□ -0.26
USP43-206ENST00000575346 LYPLA2O95372 231 aa13.41□□□□□ -0.26
USP43-206ENST00000575346 COL9A1P20849 921 aa13.41□□□□□ -0.26
USP43-206ENST00000575346 AAK1Q2M2I8 961 aa13.41□□□□□ -0.26
USP43-206ENST00000575346 NCAPH2Q6IBW4 605 aa13.41□□□□□ -0.26
USP43-206ENST00000575346 OTUD6AQ7L8S5 288 aa13.41□□□□□ -0.26
USP43-206ENST00000575346 ADAMTS19Q8TE59 1207 aa13.41□□□□□ -0.26
USP43-206ENST00000575346 SH2D3AQ9BRG2 576 aa13.41□□□□□ -0.26
USP43-206ENST00000575346 C11orf84Q9BUA3 381 aaPredicted RBP13.41□□□□□ -0.26
USP43-206ENST00000575346 TTC12Q9H892 705 aaPredicted RBP13.41□□□□□ -0.26
USP43-206ENST00000575346 TMEM161AQ9NX61 479 aa13.41□□□□□ -0.26
USP43-206ENST00000575346 RGL1Q9NZL6 768 aa13.41□□□□□ -0.26
USP43-206ENST00000575346 LRFN2Q9ULH4 789 aa13.41□□□□□ -0.26
USP43-206ENST00000575346 FNDC1Q4ZHG4 1894 aaPredicted RBP13.41□□□□□ -0.26
USP43-206ENST00000575346 GAS2O43903 313 aaKnown RBP13.4□□□□□ -0.26
USP43-206ENST00000575346 ST18O60284 1047 aa13.4□□□□□ -0.26
USP43-206ENST00000575346 ZSCAN20P17040 1043 aaPredicted RBP13.4□□□□□ -0.26
USP43-206ENST00000575346 YWHABP31946 246 aaKnown RBP13.4□□□□□ -0.26
USP43-206ENST00000575346 CTNNB1P35222 781 aa13.4□□□□□ -0.26
USP43-206ENST00000575346 RFC5P40937 340 aa13.4□□□□□ -0.26
USP43-206ENST00000575346 FOSBP53539 338 aa13.4□□□□□ -0.26
USP43-206ENST00000575346 NPEPPSP55786 919 aa13.4□□□□□ -0.26
USP43-206ENST00000575346 TIGD5Q53EQ6 642 aa13.4□□□□□ -0.26
USP43-206ENST00000575346 PLA2G4FQ68DD2 849 aa13.4□□□□□ -0.26
USP43-206ENST00000575346 FAM184AQ8NB25 1140 aa13.4□□□□□ -0.26
USP43-206ENST00000575346 NLRP7Q8WX94 980 aa13.4□□□□□ -0.26
USP43-206ENST00000575346 SLC7A3Q8WY07 619 aa13.4□□□□□ -0.26
USP43-206ENST00000575346 HLA-CQ95604 372 aa13.4□□□□□ -0.26
USP43-206ENST00000575346 DYDC2Q96IM9 177 aa13.4□□□□□ -0.26
USP43-206ENST00000575346 CEP170P1Q96L14 293 aa13.4□□□□□ -0.26
USP43-206ENST00000575346 EIF2AK1Q9BQI3 630 aaKnown RBP13.4□□□□□ -0.26
USP43-206ENST00000575346 TRAIPQ9BWF2 469 aa13.4□□□□□ -0.26
USP43-206ENST00000575346 GCOM2Q9BZD3 368 aaPredicted RBP13.4□□□□□ -0.26
USP43-206ENST00000575346 INO80BQ9C086 356 aaPredicted RBP13.4□□□□□ -0.26
USP43-206ENST00000575346 UPF2Q9HAU5 1272 aaKnown RBP13.4□□□□□ -0.26
USP43-206ENST00000575346 CHST12Q9NRB3 414 aa13.4□□□□□ -0.26
USP43-206ENST00000575346 SUCLA2Q9P2R7 463 aaPredicted RBP13.4□□□□□ -0.26
USP43-206ENST00000575346 MRPL42Q9Y6G3 142 aaKnown RBP13.4□□□□□ -0.26
USP43-206ENST00000575346 KIAA1671Q9BY89 1806 aa13.4□□□□□ -0.26
USP43-206ENST00000575346 ARID2Q68CP9 1835 aa13.39□□□□□ -0.27
USP43-206ENST00000575346 A0A087WZ62 844 aa13.39□□□□□ -0.27
USP43-206ENST00000575346 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.39□□□□□ -0.27
USP43-206ENST00000575346 A0A0U1RQF3 1178 aa13.39□□□□□ -0.27
USP43-206ENST00000575346 BMP1P13497 986 aa13.39□□□□□ -0.27
USP43-206ENST00000575346 TXKP42681 527 aa13.39□□□□□ -0.27
USP43-206ENST00000575346 TRAPPC10P48553 1259 aa13.39□□□□□ -0.27
USP43-206ENST00000575346 GUCY1B3Q02153 619 aa13.39□□□□□ -0.27
USP43-206ENST00000575346 CTTNQ14247 550 aaKnown RBP13.39□□□□□ -0.27
USP43-206ENST00000575346 COL19A1Q14993 1142 aa13.39□□□□□ -0.27
USP43-206ENST00000575346 SKIV2LQ15477 1246 aaKnown RBP13.39□□□□□ -0.27
USP43-206ENST00000575346 ZNF579Q8NAF0 562 aaKnown RBP13.39□□□□□ -0.27
USP43-206ENST00000575346 FDXACB1Q9BRP7 624 aaPredicted RBP13.39□□□□□ -0.27
USP43-206ENST00000575346 TMEM60Q9H2L4 133 aa13.39□□□□□ -0.27
USP43-206ENST00000575346 ANKEF1Q9NU02 776 aa13.39□□□□□ -0.27
USP43-206ENST00000575346 REV3LO60673 3130 aa13.38□□□□□ -0.27
USP43-206ENST00000575346 BDP1A6H8Y1 2624 aa13.38□□□□□ -0.27
USP43-206ENST00000575346 XIRP2A4UGR9 3374 aa13.38□□□□□ -0.27
USP43-206ENST00000575346 ASAP2O43150 1006 aa13.38□□□□□ -0.27
USP43-206ENST00000575346 HOXA2O43364 376 aa13.38□□□□□ -0.27
USP43-206ENST00000575346 XRCC6P12956 609 aaKnown RBP eCLIP13.38□□□□□ -0.27
USP43-206ENST00000575346 U2AF2P26368 475 aaKnown RBP eCLIP13.38□□□□□ -0.27
USP43-206ENST00000575346 MCM2P49736 904 aa13.38□□□□□ -0.27
USP43-206ENST00000575346 GATMP50440 423 aa13.38□□□□□ -0.27
USP43-206ENST00000575346 POLGP54098 1239 aaPredicted RBP13.38□□□□□ -0.27
USP43-206ENST00000575346 CYP4A11Q02928 519 aa13.38□□□□□ -0.27
USP43-206ENST00000575346 TFF2Q03403 129 aa13.38□□□□□ -0.27
USP43-206ENST00000575346 FAM102BQ5T8I3 360 aa13.38□□□□□ -0.27
USP43-206ENST00000575346 ECHDC2Q86YB7 292 aa13.38□□□□□ -0.27
USP43-206ENST00000575346 RHPN2Q8IUC4 686 aa13.38□□□□□ -0.27
USP43-206ENST00000575346 NOSTRINQ8IVI9 506 aa13.38□□□□□ -0.27
USP43-206ENST00000575346 TPH2Q8IWU9 490 aa13.38□□□□□ -0.27
USP43-206ENST00000575346 TCP11Q8WWU5 503 aa13.38□□□□□ -0.27
USP43-206ENST00000575346 ZNF668Q96K58 619 aaPredicted RBP13.38□□□□□ -0.27
USP43-206ENST00000575346 TBC1D32Q96NH3 1257 aa13.38□□□□□ -0.27
USP43-206ENST00000575346 SCLT1Q96NL6 688 aa13.38□□□□□ -0.27
USP43-206ENST00000575346 UHRF1Q96T88 793 aaPredicted RBP13.38□□□□□ -0.27
USP43-206ENST00000575346 NSUN3Q9H649 340 aaKnown RBP13.38□□□□□ -0.27
USP43-206ENST00000575346 ATP6V0A4Q9HBG4 840 aa13.38□□□□□ -0.27
USP43-206ENST00000575346 IFT122Q9HBG6 1241 aa13.38□□□□□ -0.27
USP43-206ENST00000575346 RNF19AQ9NV58 838 aa13.38□□□□□ -0.27
USP43-206ENST00000575346 DACT1Q9NYF0 836 aa13.38□□□□□ -0.27
USP43-206ENST00000575346 RAPGEFL1Q9UHV5 662 aa13.38□□□□□ -0.27
USP43-206ENST00000575346 PLAGL2Q9UPG8 496 aa13.38□□□□□ -0.27
USP43-206ENST00000575346 COL4A3BPQ9Y5P4 624 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms