RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 MRPL42Q9Y6G3 142 aaKnown RBP22.08■■□□□ 1.13
SCARF1-208ENST00000574545 MARCH6O60337 910 aa22.07■■□□□ 1.12
SCARF1-208ENST00000574545 HMGN5P82970 282 aaKnown RBP22.07■■□□□ 1.12
SCARF1-208ENST00000574545 CDC42EP1Q00587 391 aa22.07■■□□□ 1.12
SCARF1-208ENST00000574545 TFF2Q03403 129 aa22.07■■□□□ 1.12
SCARF1-208ENST00000574545 SKIV2LQ15477 1246 aaKnown RBP22.07■■□□□ 1.12
SCARF1-208ENST00000574545 NCAPH2Q6IBW4 605 aa22.07■■□□□ 1.12
SCARF1-208ENST00000574545 DYDC2Q96IM9 177 aa22.07■■□□□ 1.12
SCARF1-208ENST00000574545 C8orf76Q96K31 380 aa22.07■■□□□ 1.12
SCARF1-208ENST00000574545 TMEM60Q9H2L4 133 aa22.07■■□□□ 1.12
SCARF1-208ENST00000574545 DHX33Q9H6R0 707 aaKnown RBP22.07■■□□□ 1.12
SCARF1-208ENST00000574545 ELAC1Q9H777 363 aaKnown RBP22.07■■□□□ 1.12
SCARF1-208ENST00000574545 PCDHA12Q9UN75 941 aa22.07■■□□□ 1.12
SCARF1-208ENST00000574545 NCOR1O75376 2440 aa22.07■■□□□ 1.12
SCARF1-208ENST00000574545 DENND3A2RUS2 1198 aa22.06■■□□□ 1.12
SCARF1-208ENST00000574545 BMP1P13497 986 aa22.06■■□□□ 1.12
SCARF1-208ENST00000574545 CTNNB1P35222 781 aa22.06■■□□□ 1.12
SCARF1-208ENST00000574545 RABEP1Q15276 862 aa22.06■■□□□ 1.12
SCARF1-208ENST00000574545 CALCRLQ16602 461 aa22.06■■□□□ 1.12
SCARF1-208ENST00000574545 FAM102BQ5T8I3 360 aa22.06■■□□□ 1.12
SCARF1-208ENST00000574545 PLVAPQ9BX97 442 aa22.06■■□□□ 1.12
SCARF1-208ENST00000574545 FOXP1Q9H334 677 aaPredicted RBP22.06■■□□□ 1.12
SCARF1-208ENST00000574545 ZSWIM4Q9H7M6 989 aa22.06■■□□□ 1.12
SCARF1-208ENST00000574545 PPME1Q9Y570 386 aa22.06■■□□□ 1.12
SCARF1-208ENST00000574545 PCDHB7Q9Y5E2 793 aa22.06■■□□□ 1.12
SCARF1-208ENST00000574545 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.05■■□□□ 1.12
SCARF1-208ENST00000574545 ZBTB39O15060 712 aa22.05■■□□□ 1.12
SCARF1-208ENST00000574545 NEMFO60524 1076 aa22.05■■□□□ 1.12
SCARF1-208ENST00000574545 YWHABP31946 246 aaKnown RBP22.05■■□□□ 1.12
SCARF1-208ENST00000574545 CTTNQ14247 550 aaKnown RBP22.05■■□□□ 1.12
SCARF1-208ENST00000574545 SAFBQ15424 915 aaKnown RBP eCLIP22.05■■□□□ 1.12
SCARF1-208ENST00000574545 PTPROQ16827 1216 aa22.05■■□□□ 1.12
SCARF1-208ENST00000574545 HLA-CQ95604 372 aa22.05■■□□□ 1.12
SCARF1-208ENST00000574545 EIF2AK1Q9BQI3 630 aaKnown RBP22.05■■□□□ 1.12
SCARF1-208ENST00000574545 JPH2Q9BR39 696 aaPredicted RBP22.05■■□□□ 1.12
SCARF1-208ENST00000574545 TTC12Q9H892 705 aaPredicted RBP22.05■■□□□ 1.12
SCARF1-208ENST00000574545 TMEM161AQ9NX61 479 aa22.05■■□□□ 1.12
SCARF1-208ENST00000574545 SUCLA2Q9P2R7 463 aaPredicted RBP22.05■■□□□ 1.12
SCARF1-208ENST00000574545 LRFN2Q9ULH4 789 aa22.05■■□□□ 1.12
SCARF1-208ENST00000574545 A0A087WZ62 844 aa22.04■■□□□ 1.12
SCARF1-208ENST00000574545 GRM6O15303 877 aa22.04■■□□□ 1.12
SCARF1-208ENST00000574545 CSDE1O75534 798 aaKnown RBP22.04■■□□□ 1.12
SCARF1-208ENST00000574545 LYPLA2O95372 231 aa22.04■■□□□ 1.12
SCARF1-208ENST00000574545 FGFR4P22455 802 aa22.04■■□□□ 1.12
SCARF1-208ENST00000574545 DNM2P50570 870 aa22.04■■□□□ 1.12
SCARF1-208ENST00000574545 CYP4A11Q02928 519 aa22.04■■□□□ 1.12
SCARF1-208ENST00000574545 PAN2Q504Q3 1202 aaKnown RBP22.04■■□□□ 1.12
SCARF1-208ENST00000574545 ZNF410Q86VK4 478 aa22.04■■□□□ 1.12
SCARF1-208ENST00000574545 NLRP7Q8WX94 980 aa22.04■■□□□ 1.12
SCARF1-208ENST00000574545 P2RX5Q93086 422 aa22.04■■□□□ 1.12
SCARF1-208ENST00000574545 CEP170P1Q96L14 293 aa22.04■■□□□ 1.12
SCARF1-208ENST00000574545 FDXACB1Q9BRP7 624 aaPredicted RBP22.04■■□□□ 1.12
SCARF1-208ENST00000574545 C11orf84Q9BUA3 381 aaPredicted RBP22.04■■□□□ 1.12
SCARF1-208ENST00000574545 RNF19AQ9NV58 838 aa22.04■■□□□ 1.12
SCARF1-208ENST00000574545 RNF216Q9NWF9 866 aaPredicted RBP22.04■■□□□ 1.12
SCARF1-208ENST00000574545 FNDC1Q4ZHG4 1894 aaPredicted RBP22.04■■□□□ 1.12
SCARF1-208ENST00000574545 TXKP42681 527 aa22.03■■□□□ 1.12
SCARF1-208ENST00000574545 CAMK1Q14012 370 aa22.03■■□□□ 1.12
SCARF1-208ENST00000574545 NAALADL2Q58DX5 795 aa22.03■■□□□ 1.12
SCARF1-208ENST00000574545 RHPN2Q8IUC4 686 aa22.03■■□□□ 1.12
SCARF1-208ENST00000574545 KSR1Q8IVT5 923 aa22.03■■□□□ 1.12
SCARF1-208ENST00000574545 IL27Q8NEV9 243 aa22.03■■□□□ 1.12
SCARF1-208ENST00000574545 GCOM2Q9BZD3 368 aaPredicted RBP22.03■■□□□ 1.12
SCARF1-208ENST00000574545 LMAN2LQ9H0V9 348 aa22.03■■□□□ 1.12
SCARF1-208ENST00000574545 PLAGL2Q9UPG8 496 aa22.03■■□□□ 1.12
SCARF1-208ENST00000574545 CD2BP2O95400 341 aaKnown RBP22.02■■□□□ 1.12
SCARF1-208ENST00000574545 ZSCAN20P17040 1043 aaPredicted RBP22.02■■□□□ 1.12
SCARF1-208ENST00000574545 RFC5P40937 340 aa22.02■■□□□ 1.12
SCARF1-208ENST00000574545 KCNQ1P51787 676 aa22.02■■□□□ 1.12
SCARF1-208ENST00000574545 COL19A1Q14993 1142 aa22.02■■□□□ 1.12
SCARF1-208ENST00000574545 OTUD6AQ7L8S5 288 aa22.02■■□□□ 1.12
SCARF1-208ENST00000574545 TPH2Q8IWU9 490 aa22.02■■□□□ 1.12
SCARF1-208ENST00000574545 EXOC8Q8IYI6 725 aa22.02■■□□□ 1.12
SCARF1-208ENST00000574545 ATP6V0A4Q9HBG4 840 aa22.02■■□□□ 1.12
SCARF1-208ENST00000574545 IFT122Q9HBG6 1241 aa22.02■■□□□ 1.12
SCARF1-208ENST00000574545 KIAA1671Q9BY89 1806 aa22.01■■□□□ 1.11
SCARF1-208ENST00000574545 A0A0U1RQF3 1178 aa22.01■■□□□ 1.11
SCARF1-208ENST00000574545 FGFR1P11362 822 aa22.01■■□□□ 1.11
SCARF1-208ENST00000574545 ATP2B1P20020 1258 aa22.01■■□□□ 1.11
SCARF1-208ENST00000574545 IBSPP21815 317 aaPredicted RBP22.01■■□□□ 1.11
SCARF1-208ENST00000574545 U2AF2P26368 475 aaKnown RBP eCLIP22.01■■□□□ 1.11
SCARF1-208ENST00000574545 MCM7P33993 719 aa22.01■■□□□ 1.11
SCARF1-208ENST00000574545 ORC2Q13416 577 aaPredicted RBP22.01■■□□□ 1.11
SCARF1-208ENST00000574545 AAK1Q2M2I8 961 aa22.01■■□□□ 1.11
SCARF1-208ENST00000574545 TIGD5Q53EQ6 642 aa22.01■■□□□ 1.11
SCARF1-208ENST00000574545 ZNF598Q86UK7 904 aaKnown RBP22.01■■□□□ 1.11
SCARF1-208ENST00000574545 ECHDC2Q86YB7 292 aa22.01■■□□□ 1.11
SCARF1-208ENST00000574545 FAM184AQ8NB25 1140 aa22.01■■□□□ 1.11
SCARF1-208ENST00000574545 SPPL3Q8TCT6 385 aa22.01■■□□□ 1.11
SCARF1-208ENST00000574545 NEK9Q8TD19 979 aa22.01■■□□□ 1.11
SCARF1-208ENST00000574545 SLC7A3Q8WY07 619 aa22.01■■□□□ 1.11
SCARF1-208ENST00000574545 TRAIPQ9BWF2 469 aa22.01■■□□□ 1.11
SCARF1-208ENST00000574545 XPNPEP1Q9NQW7 623 aa22.01■■□□□ 1.11
SCARF1-208ENST00000574545 CHST12Q9NRB3 414 aa22.01■■□□□ 1.11
SCARF1-208ENST00000574545 ATG2AQ2TAZ0 1938 aa22■■□□□ 1.11
SCARF1-208ENST00000574545 TBKBP1A7MCY6 615 aa22■■□□□ 1.11
SCARF1-208ENST00000574545 ITGB1P05556 798 aa22■■□□□ 1.11
SCARF1-208ENST00000574545 SPATA31C1P0DKV0 1188 aa22■■□□□ 1.11
SCARF1-208ENST00000574545 DNAJB1P25685 340 aa22■■□□□ 1.11
SCARF1-208ENST00000574545 POLGP54098 1239 aaPredicted RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms