RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 FNDC1Q4ZHG4 1894 aaPredicted RBP29.21■■■□□ 2.27
NPLOC4-215ENST00000574095 WNT7AO00755 349 aa29.21■■■□□ 2.27
NPLOC4-215ENST00000574095 GRM6O15303 877 aa29.21■■■□□ 2.27
NPLOC4-215ENST00000574095 MAFO75444 373 aaPredicted RBP29.21■■■□□ 2.27
NPLOC4-215ENST00000574095 FGFR4P22455 802 aa29.21■■■□□ 2.27
NPLOC4-215ENST00000574095 RGL1Q9NZL6 768 aa29.21■■■□□ 2.27
NPLOC4-215ENST00000574095 DKC1O60832 514 aaKnown RBP eCLIP29.2■■■□□ 2.26
NPLOC4-215ENST00000574095 CSDE1O75534 798 aaKnown RBP29.2■■■□□ 2.26
NPLOC4-215ENST00000574095 DARSP14868 501 aaKnown RBP29.2■■■□□ 2.26
NPLOC4-215ENST00000574095 DNM2P50570 870 aa29.2■■■□□ 2.26
NPLOC4-215ENST00000574095 NPEPPSP55786 919 aa29.2■■■□□ 2.26
NPLOC4-215ENST00000574095 SPIRE1Q08AE8 756 aa29.2■■■□□ 2.26
NPLOC4-215ENST00000574095 TIGD5Q53EQ6 642 aa29.2■■■□□ 2.26
NPLOC4-215ENST00000574095 ZNF579Q8NAF0 562 aaKnown RBP29.2■■■□□ 2.26
NPLOC4-215ENST00000574095 DYDC2Q96IM9 177 aa29.2■■■□□ 2.26
NPLOC4-215ENST00000574095 CYP26B1Q9NR63 512 aa29.2■■■□□ 2.26
NPLOC4-215ENST00000574095 SUCLA2Q9P2R7 463 aaPredicted RBP29.2■■■□□ 2.26
NPLOC4-215ENST00000574095 ATG2AQ2TAZ0 1938 aa29.2■■■□□ 2.26
NPLOC4-215ENST00000574095 ZSCAN20P17040 1043 aaPredicted RBP29.19■■■□□ 2.26
NPLOC4-215ENST00000574095 FAM189BP81408 668 aa29.19■■■□□ 2.26
NPLOC4-215ENST00000574095 TCEAL5Q5H9L2 206 aa29.19■■■□□ 2.26
NPLOC4-215ENST00000574095 ZSCAN31Q96LW9 406 aaPredicted RBP29.19■■■□□ 2.26
NPLOC4-215ENST00000574095 UHRF1Q96T88 793 aaPredicted RBP29.19■■■□□ 2.26
NPLOC4-215ENST00000574095 LXNQ9BS40 222 aa29.19■■■□□ 2.26
NPLOC4-215ENST00000574095 PLVAPQ9BX97 442 aa29.19■■■□□ 2.26
NPLOC4-215ENST00000574095 ALG13Q9NP73 1137 aaKnown RBP29.19■■■□□ 2.26
NPLOC4-215ENST00000574095 RNF216Q9NWF9 866 aaPredicted RBP29.19■■■□□ 2.26
NPLOC4-215ENST00000574095 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP29.18■■■□□ 2.26
NPLOC4-215ENST00000574095 TBKBP1A7MCY6 615 aa29.18■■■□□ 2.26
NPLOC4-215ENST00000574095 CSPG5O95196 566 aa29.18■■■□□ 2.26
NPLOC4-215ENST00000574095 CTTNQ14247 550 aaKnown RBP29.18■■■□□ 2.26
NPLOC4-215ENST00000574095 CALCRLQ16602 461 aa29.18■■■□□ 2.26
NPLOC4-215ENST00000574095 RHPN2Q8IUC4 686 aa29.18■■■□□ 2.26
NPLOC4-215ENST00000574095 CEP170P1Q96L14 293 aa29.18■■■□□ 2.26
NPLOC4-215ENST00000574095 NECAB3Q96P71 396 aaPredicted RBP29.18■■■□□ 2.26
NPLOC4-215ENST00000574095 LLPHQ9BRT6 129 aaKnown RBP29.18■■■□□ 2.26
NPLOC4-215ENST00000574095 NSUN3Q9H649 340 aaKnown RBP29.18■■■□□ 2.26
NPLOC4-215ENST00000574095 UBE2ZQ9H832 354 aaPredicted RBP29.18■■■□□ 2.26
NPLOC4-215ENST00000574095 ATP6V0A4Q9HBG4 840 aa29.18■■■□□ 2.26
NPLOC4-215ENST00000574095 TMEM161AQ9NX61 479 aa29.18■■■□□ 2.26
NPLOC4-215ENST00000574095 PCDHA12Q9UN75 941 aa29.18■■■□□ 2.26
NPLOC4-215ENST00000574095 PLAGL2Q9UPG8 496 aa29.18■■■□□ 2.26
NPLOC4-215ENST00000574095 MYO7AQ13402 2215 aa29.17■■■□□ 2.26
NPLOC4-215ENST00000574095 A0A087WZ62 844 aa29.17■■■□□ 2.26
NPLOC4-215ENST00000574095 ATP2B1P20020 1258 aa29.17■■■□□ 2.26
NPLOC4-215ENST00000574095 CDC42EP1Q00587 391 aa29.17■■■□□ 2.26
NPLOC4-215ENST00000574095 CYP4A11Q02928 519 aa29.17■■■□□ 2.26
NPLOC4-215ENST00000574095 SAFBQ15424 915 aaKnown RBP eCLIP29.17■■■□□ 2.26
NPLOC4-215ENST00000574095 KSR1Q8IVT5 923 aa29.17■■■□□ 2.26
NPLOC4-215ENST00000574095 C4orf19Q8IY42 314 aa29.17■■■□□ 2.26
NPLOC4-215ENST00000574095 C8orf76Q96K31 380 aa29.17■■■□□ 2.26
NPLOC4-215ENST00000574095 FDXACB1Q9BRP7 624 aaPredicted RBP29.17■■■□□ 2.26
NPLOC4-215ENST00000574095 GCOM2Q9BZD3 368 aaPredicted RBP29.17■■■□□ 2.26
NPLOC4-215ENST00000574095 LMAN2LQ9H0V9 348 aa29.17■■■□□ 2.26
NPLOC4-215ENST00000574095 ELAC1Q9H777 363 aaKnown RBP29.17■■■□□ 2.26
NPLOC4-215ENST00000574095 TTC28Q96AY4 2481 aa29.17■■■□□ 2.26
NPLOC4-215ENST00000574095 BRWD1Q9NSI6 2320 aa29.16■■■□□ 2.26
NPLOC4-215ENST00000574095 TNFRSF10AO00220 468 aa29.16■■■□□ 2.26
NPLOC4-215ENST00000574095 FGFR1P11362 822 aa29.16■■■□□ 2.26
NPLOC4-215ENST00000574095 YWHABP31946 246 aaKnown RBP29.16■■■□□ 2.26
NPLOC4-215ENST00000574095 P2RX5Q93086 422 aa29.16■■■□□ 2.26
NPLOC4-215ENST00000574095 JPH2Q9BR39 696 aaPredicted RBP29.16■■■□□ 2.26
NPLOC4-215ENST00000574095 ZBTB39O15060 712 aa29.15■■■□□ 2.26
NPLOC4-215ENST00000574095 NEMFO60524 1076 aa29.15■■■□□ 2.26
NPLOC4-215ENST00000574095 TXKP42681 527 aa29.15■■■□□ 2.26
NPLOC4-215ENST00000574095 RBM25P49756 843 aaKnown RBP29.15■■■□□ 2.26
NPLOC4-215ENST00000574095 SPOUT1Q5T280 376 aaKnown RBP29.15■■■□□ 2.26
NPLOC4-215ENST00000574095 TPH2Q8IWU9 490 aa29.15■■■□□ 2.26
NPLOC4-215ENST00000574095 KLHL23Q8NBE8 558 aa29.15■■■□□ 2.26
NPLOC4-215ENST00000574095 ZSWIM4Q9H7M6 989 aa29.15■■■□□ 2.26
NPLOC4-215ENST00000574095 TTC12Q9H892 705 aaPredicted RBP29.15■■■□□ 2.26
NPLOC4-215ENST00000574095 BMP2KQ9NSY1 1161 aaPredicted RBP29.15■■■□□ 2.26
NPLOC4-215ENST00000574095 SLITRK3O94933 977 aa29.14■■■□□ 2.26
NPLOC4-215ENST00000574095 ITGB1P05556 798 aa29.14■■■□□ 2.26
NPLOC4-215ENST00000574095 KCNA5P22460 613 aa29.14■■■□□ 2.26
NPLOC4-215ENST00000574095 OTUD6AQ7L8S5 288 aa29.14■■■□□ 2.26
NPLOC4-215ENST00000574095 SPPL3Q8TCT6 385 aa29.14■■■□□ 2.26
NPLOC4-215ENST00000574095 SLC7A3Q8WY07 619 aa29.14■■■□□ 2.26
NPLOC4-215ENST00000574095 NLRP4Q96MN2 994 aa29.14■■■□□ 2.26
NPLOC4-215ENST00000574095 EIF2AK1Q9BQI3 630 aaKnown RBP29.14■■■□□ 2.26
NPLOC4-215ENST00000574095 SH2B1Q9NRF2 756 aaPredicted RBP29.14■■■□□ 2.26
NPLOC4-215ENST00000574095 HCSTQ9UBK5 93 aa29.14■■■□□ 2.26
NPLOC4-215ENST00000574095 DNAJB1P25685 340 aa29.13■■■□□ 2.25
NPLOC4-215ENST00000574095 POLGP54098 1239 aaPredicted RBP29.13■■■□□ 2.25
NPLOC4-215ENST00000574095 CAMK1Q14012 370 aa29.13■■■□□ 2.25
NPLOC4-215ENST00000574095 NAALADL2Q58DX5 795 aa29.13■■■□□ 2.25
NPLOC4-215ENST00000574095 XKR9Q5GH70 373 aa29.13■■■□□ 2.25
NPLOC4-215ENST00000574095 ZNF410Q86VK4 478 aa29.13■■■□□ 2.25
NPLOC4-215ENST00000574095 ECHDC2Q86YB7 292 aa29.13■■■□□ 2.25
NPLOC4-215ENST00000574095 TMEM143Q96AN5 459 aa29.13■■■□□ 2.25
NPLOC4-215ENST00000574095 MTMR9Q96QG7 549 aa29.13■■■□□ 2.25
NPLOC4-215ENST00000574095 TMEM60Q9H2L4 133 aa29.13■■■□□ 2.25
NPLOC4-215ENST00000574095 DHX33Q9H6R0 707 aaKnown RBP29.13■■■□□ 2.25
NPLOC4-215ENST00000574095 TYW1Q9NV66 732 aaKnown RBP29.13■■■□□ 2.25
NPLOC4-215ENST00000574095 MCM7P33993 719 aa29.12■■■□□ 2.25
NPLOC4-215ENST00000574095 HMGN5P82970 282 aaKnown RBP29.12■■■□□ 2.25
NPLOC4-215ENST00000574095 EP400NLQ6ZTU2 488 aa29.12■■■□□ 2.25
NPLOC4-215ENST00000574095 FAM184AQ8NB25 1140 aa29.12■■■□□ 2.25
NPLOC4-215ENST00000574095 RNF169Q8NCN4 708 aa29.12■■■□□ 2.25
NPLOC4-215ENST00000574095 RNF19AQ9NV58 838 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms