RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 MARK3P27448 753 aa8.2□□□□□ -1.1
RPA1-207ENST00000574049 MAGEA9P43362 315 aa8.2□□□□□ -1.1
RPA1-207ENST00000574049 TMEM132BQ14DG7 1078 aa8.2□□□□□ -1.1
RPA1-207ENST00000574049 SMAD1Q15797 465 aaKnown RBP8.2□□□□□ -1.1
RPA1-207ENST00000574049 CEP55Q53EZ4 464 aa8.2□□□□□ -1.1
RPA1-207ENST00000574049 ZNF394Q53GI3 561 aa8.2□□□□□ -1.1
RPA1-207ENST00000574049 ZNF658Q5TYW1 1059 aaPredicted RBP8.2□□□□□ -1.1
RPA1-207ENST00000574049 SPOCK3Q9BQ16 436 aa8.2□□□□□ -1.1
RPA1-207ENST00000574049 ACAD9Q9H845 621 aa8.2□□□□□ -1.1
RPA1-207ENST00000574049 CPSF2Q9P2I0 782 aaKnown RBP8.2□□□□□ -1.1
RPA1-207ENST00000574049 PTPN22Q9Y2R2 807 aa8.2□□□□□ -1.1
RPA1-207ENST00000574049 A0A1B0GUA9 196 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 IPO5O00410 1097 aaKnown RBP8.19□□□□□ -1.1
RPA1-207ENST00000574049 ZBTB39O15060 712 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 RNF40O75150 1001 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 PLA2G4BP0C869 781 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 DSG3P32926 999 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 STAT1P42224 750 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 STK4Q13043 487 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 AP3B2Q13367 1082 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 SNAPC2Q13487 334 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 MTMR1Q13613 665 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 MESDQ14696 234 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 KRT71Q3SY84 523 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 ZNF467Q7Z7K2 595 aaPredicted RBP8.19□□□□□ -1.1
RPA1-207ENST00000574049 RNF169Q8NCN4 708 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 VRTNQ9H8Y1 702 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 CDC23Q9UJX2 597 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 DUSP10Q9Y6W6 482 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 ESYT2A0FGR8 921 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 NR3C2P08235 984 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 FECHP22830 423 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 MCM3P25205 808 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 ERCC5P28715 1186 aaPredicted RBP8.19□□□□□ -1.1
RPA1-207ENST00000574049 SMTNP53814 917 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 HERVK_113P62684 666 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 PDCLQ13371 301 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 EXOC3L4Q17RC7 722 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 ARL6IP4Q66PJ3 421 aaKnown RBP8.19□□□□□ -1.1
RPA1-207ENST00000574049 CCDC121Q6ZUS5 278 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 SH2D3CQ8N5H7 860 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 SYTL5Q8TDW5 730 aaPredicted RBP8.19□□□□□ -1.1
RPA1-207ENST00000574049 EXOC4Q96A65 974 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 DYDC2Q96IM9 177 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 CPA4Q9UI42 421 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 PPP2R3BQ9Y5P8 575 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 MSH4O15457 936 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 CSPG5O95196 566 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 NDUFA10O95299 355 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 VSNL1P62760 191 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 TCP11X2Q5H9J9 407 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 BSPRYQ5W0U4 402 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 KAZNQ674X7 775 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 ZNF746Q6NUN9 644 aaPredicted RBP8.19□□□□□ -1.1
RPA1-207ENST00000574049 PPP1R18Q6NYC8 613 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 SRGAP1Q7Z6B7 1085 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 ZNF354CQ86Y25 554 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 CCDC105Q8IYK2 499 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 NOA1Q8NC60 698 aaKnown RBP8.19□□□□□ -1.1
RPA1-207ENST00000574049 DHX38Q92620 1227 aaKnown RBP8.19□□□□□ -1.1
RPA1-207ENST00000574049 TBC1D31Q96DN5 1066 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 TEKT3Q9BXF9 490 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 NDST4Q9H3R1 872 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 SLC38A10Q9HBR0 1119 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 EPB41L5Q9HCM4 733 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 AGPAT5Q9NUQ2 364 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 ASIC3Q9UHC3 531 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 BAIAP2L1Q9UHR4 511 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 GGT7Q9UJ14 662 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 STK38LQ9Y2H1 464 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 LAMA4Q16363 1823 aa8.19□□□□□ -1.1
RPA1-207ENST00000574049 SPDYE16A6NNV3 312 aaPredicted RBP8.18□□□□□ -1.1
RPA1-207ENST00000574049 GCFC2P16383 781 aaKnown RBP8.18□□□□□ -1.1
RPA1-207ENST00000574049 TMOD1P28289 359 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 CA8P35219 290 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 CASP8Q14790 479 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 IFI16Q16666 785 aaKnown RBP8.18□□□□□ -1.1
RPA1-207ENST00000574049 MCTP2Q6DN12 878 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 CC2D1AQ6P1N0 951 aaPredicted RBP8.18□□□□□ -1.1
RPA1-207ENST00000574049 SLFN12Q8IYM2 578 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 TRIML1Q8N9V2 468 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 DAGLBQ8NCG7 672 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 NT5C3AQ9H0P0 336 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 NHEJ1Q9H9Q4 299 aaPredicted RBP8.18□□□□□ -1.1
RPA1-207ENST00000574049 IGSF5Q9NSI5 407 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 COL20A1Q9P218 1284 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 AFG3L2Q9Y4W6 797 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 PLIN4Q96Q06 1357 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 CALUO43852 315 aaPredicted RBP8.18□□□□□ -1.1
RPA1-207ENST00000574049 TUBB4AP04350 444 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 FKBP3Q00688 224 aaKnown RBP8.18□□□□□ -1.1
RPA1-207ENST00000574049 SNX1Q13596 522 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 ZKSCAN8Q15776 578 aaPredicted RBP8.18□□□□□ -1.1
RPA1-207ENST00000574049 RAD9BQ6WBX8 426 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 CATSPERGQ6ZRH7 1159 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 SPIRE2Q8WWL2 714 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 N4BP2L2Q92802 583 aaPredicted RBP8.18□□□□□ -1.1
RPA1-207ENST00000574049 WDR18Q9BV38 432 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 APOL6Q9BWW8 343 aa8.18□□□□□ -1.1
RPA1-207ENST00000574049 RANBP17Q9H2T7 1088 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms