RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 MICAL3Q7RTP6 2002 aa14.19□□□□□ -0.14
TRAPPC1-206ENST00000573989 GPR182O15218 404 aa14.19□□□□□ -0.14
TRAPPC1-206ENST00000573989 GPR32O75388 356 aa14.19□□□□□ -0.14
TRAPPC1-206ENST00000573989 RPS6KA5O75582 802 aa14.19□□□□□ -0.14
TRAPPC1-206ENST00000573989 GPC3P51654 580 aa14.19□□□□□ -0.14
TRAPPC1-206ENST00000573989 DNM1Q05193 864 aaKnown RBP14.19□□□□□ -0.14
TRAPPC1-206ENST00000573989 TFDP1Q14186 410 aa14.19□□□□□ -0.14
TRAPPC1-206ENST00000573989 LPIN1Q14693 890 aa14.19□□□□□ -0.14
TRAPPC1-206ENST00000573989 GPNMBQ14956 572 aa14.19□□□□□ -0.14
TRAPPC1-206ENST00000573989 ECM1Q16610 540 aa14.19□□□□□ -0.14
TRAPPC1-206ENST00000573989 PADI6Q6TGC4 694 aa14.19□□□□□ -0.14
TRAPPC1-206ENST00000573989 ZNF579Q8NAF0 562 aaKnown RBP14.19□□□□□ -0.14
TRAPPC1-206ENST00000573989 DBF4BQ8NFT6 615 aa14.19□□□□□ -0.14
TRAPPC1-206ENST00000573989 TMEM143Q96AN5 459 aa14.19□□□□□ -0.14
TRAPPC1-206ENST00000573989 FTHL17Q9BXU8 183 aa14.19□□□□□ -0.14
TRAPPC1-206ENST00000573989 GCOM2Q9BZD3 368 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC1-206ENST00000573989 CCSER1Q9C0I3 900 aa14.19□□□□□ -0.14
TRAPPC1-206ENST00000573989 BMP2KQ9NSY1 1161 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC1-206ENST00000573989 ZDHHC9Q9Y397 364 aa14.19□□□□□ -0.14
TRAPPC1-206ENST00000573989 MYH11P35749 1972 aa14.19□□□□□ -0.14
TRAPPC1-206ENST00000573989 TRIOBPQ9H2D6 2365 aa14.19□□□□□ -0.14
TRAPPC1-206ENST00000573989 A0A087WWV3 80 aa14.18□□□□□ -0.14
TRAPPC1-206ENST00000573989 E9PMD0 336 aa14.18□□□□□ -0.14
TRAPPC1-206ENST00000573989 CUTAO60888 179 aa14.18□□□□□ -0.14
TRAPPC1-206ENST00000573989 EIF4BP23588 611 aaKnown RBP14.18□□□□□ -0.14
TRAPPC1-206ENST00000573989 ME1P48163 572 aa14.18□□□□□ -0.14
TRAPPC1-206ENST00000573989 MKRN4PQ13434 485 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC1-206ENST00000573989 LRIT3Q3SXY7 679 aa14.18□□□□□ -0.14
TRAPPC1-206ENST00000573989 PRPF31Q8WWY3 499 aaKnown RBP14.18□□□□□ -0.14
TRAPPC1-206ENST00000573989 SYMPKQ92797 1274 aaKnown RBP14.18□□□□□ -0.14
TRAPPC1-206ENST00000573989 SPATA32Q96LK8 384 aa14.18□□□□□ -0.14
TRAPPC1-206ENST00000573989 NLRP4Q96MN2 994 aa14.18□□□□□ -0.14
TRAPPC1-206ENST00000573989 CLIC6Q96NY7 704 aa14.18□□□□□ -0.14
TRAPPC1-206ENST00000573989 PPP1R16BQ96T49 567 aa14.18□□□□□ -0.14
TRAPPC1-206ENST00000573989 SLC9A7Q96T83 725 aa14.18□□□□□ -0.14
TRAPPC1-206ENST00000573989 OSMRQ99650 979 aa14.18□□□□□ -0.14
TRAPPC1-206ENST00000573989 SCAND2PQ9GZW5 306 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC1-206ENST00000573989 ADAMTS10Q9H324 1103 aa14.18□□□□□ -0.14
TRAPPC1-206ENST00000573989 KCND2Q9NZV8 630 aa14.18□□□□□ -0.14
TRAPPC1-206ENST00000573989 CIZ1Q9ULV3 898 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC1-206ENST00000573989 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 SSBP05455 408 aaKnown RBP eCLIP14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 CYP11B2P19099 503 aa14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 SFPQP23246 707 aaKnown RBP eCLIP14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 CD52P31358 61 aa14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 GRIN1Q05586 938 aa14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 LAMTOR4Q0VGL1 99 aa14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 NFX1Q12986 1120 aaKnown RBP14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 GRB10Q13322 594 aa14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 DRP2Q13474 957 aa14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 PPP2R5AQ15172 486 aa14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 TMEM119Q4V9L6 283 aa14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 HABP4Q5JVS0 413 aaKnown RBP14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 FAM102BQ5T8I3 360 aa14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 RASIP1Q5U651 963 aa14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 PHOSPHO2Q8TCD6 241 aa14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 KIFAP3Q92845 792 aa14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 VWCEQ96DN2 955 aa14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 PNMA5Q96PV4 448 aa14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 PLIN2Q99541 437 aa14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 TIPINQ9BVW5 301 aa14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 XPNPEP1Q9NQW7 623 aa14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 RNF216Q9NWF9 866 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 PADI3Q9ULW8 664 aa14.17□□□□□ -0.14
TRAPPC1-206ENST00000573989 A0A087WZ62 844 aa14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 AMHP03971 560 aa14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 PLA2G4BP0C869 781 aa14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 SRGAP2CP0DJJ0 459 aa14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 DARSP14868 501 aaKnown RBP14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 ATP2A2P16615 1042 aaKnown RBP14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 PLCG1P19174 1290 aa14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 PHKA2P46019 1235 aa14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 POU5F1BQ06416 359 aa14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 KARSQ15046 597 aaKnown RBP14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 PCBP1Q15365 356 aaKnown RBP eCLIP14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 SPECC1Q5M775 1068 aa14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 RRAGBQ5VZM2 374 aa14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 CCDC73Q6ZRK6 1079 aa14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 MAEAQ7L5Y9 396 aa14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 SRGAP1Q7Z6B7 1085 aa14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 SYT2Q8N9I0 419 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 RNF149Q8NC42 400 aa14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 LARP4BQ92615 738 aaKnown RBP14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 EPSTI1Q96J88 318 aa14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 IFT74Q96LB3 600 aa14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 FDXACB1Q9BRP7 624 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 POLR3FQ9H1D9 316 aaPredicted RBP14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 CDHR5Q9HBB8 845 aa14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 STK17AQ9UEE5 414 aa14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 KCNG1Q9UIX4 513 aa14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 RCOR1Q9UKL0 485 aa14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 ST3GAL5Q9UNP4 418 aa14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 NOC2LQ9Y3T9 749 aaKnown RBP14.16□□□□□ -0.14
TRAPPC1-206ENST00000573989 DENND3A2RUS2 1198 aa14.15□□□□□ -0.14
TRAPPC1-206ENST00000573989 ZSCAN20P17040 1043 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC1-206ENST00000573989 DDIT3P35638 169 aa14.15□□□□□ -0.14
TRAPPC1-206ENST00000573989 ARL2P36404 184 aa14.15□□□□□ -0.14
TRAPPC1-206ENST00000573989 WDR5P61964 334 aaKnown RBP14.15□□□□□ -0.14
TRAPPC1-206ENST00000573989 NCBP1Q09161 790 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms