RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 CPLX1O14810 134 aa13.74□□□□□ -0.21
CCDC40-210ENST00000573903 PER2O15055 1255 aa13.74□□□□□ -0.21
CCDC40-210ENST00000573903 ADAMTS3O15072 1205 aa13.74□□□□□ -0.21
CCDC40-210ENST00000573903 MSH4O15457 936 aa13.74□□□□□ -0.21
CCDC40-210ENST00000573903 EPB41L2O43491 1005 aaKnown RBP13.74□□□□□ -0.21
CCDC40-210ENST00000573903 GLP2RO95838 553 aa13.74□□□□□ -0.21
CCDC40-210ENST00000573903 CCT2P78371 535 aaKnown RBP13.74□□□□□ -0.21
CCDC40-210ENST00000573903 FAM189BP81408 668 aa13.74□□□□□ -0.21
CCDC40-210ENST00000573903 DSC3Q14574 896 aa13.74□□□□□ -0.21
CCDC40-210ENST00000573903 DUSP6Q16828 381 aa13.74□□□□□ -0.21
CCDC40-210ENST00000573903 PLPP4Q5VZY2 271 aa13.74□□□□□ -0.21
CCDC40-210ENST00000573903 RNF169Q8NCN4 708 aa13.74□□□□□ -0.21
CCDC40-210ENST00000573903 NLRP7Q8WX94 980 aa13.74□□□□□ -0.21
CCDC40-210ENST00000573903 LENG9Q96B70 501 aa13.74□□□□□ -0.21
CCDC40-210ENST00000573903 TCF25Q9BQ70 676 aa13.74□□□□□ -0.21
CCDC40-210ENST00000573903 PHF7Q9BWX1 381 aaPredicted RBP13.74□□□□□ -0.21
CCDC40-210ENST00000573903 AGXT2Q9BYV1 514 aa13.74□□□□□ -0.21
CCDC40-210ENST00000573903 CWH43Q9H720 699 aa13.74□□□□□ -0.21
CCDC40-210ENST00000573903 DACT1Q9NYF0 836 aa13.74□□□□□ -0.21
CCDC40-210ENST00000573903 HCSTQ9UBK5 93 aa13.74□□□□□ -0.21
CCDC40-210ENST00000573903 SEPT9Q9UHD8 586 aaPredicted RBP13.74□□□□□ -0.21
CCDC40-210ENST00000573903 EIF5BO60841 1220 aaKnown RBP13.73□□□□□ -0.21
CCDC40-210ENST00000573903 GPC3P51654 580 aa13.73□□□□□ -0.21
CCDC40-210ENST00000573903 ERVFC1P60507 584 aa13.73□□□□□ -0.21
CCDC40-210ENST00000573903 CDC42EP1Q00587 391 aa13.73□□□□□ -0.21
CCDC40-210ENST00000573903 PLCB3Q01970 1234 aa13.73□□□□□ -0.21
CCDC40-210ENST00000573903 SSRP1Q08945 709 aaKnown RBP13.73□□□□□ -0.21
CCDC40-210ENST00000573903 BMS1Q14692 1282 aaKnown RBP13.73□□□□□ -0.21
CCDC40-210ENST00000573903 NTRK3Q16288 839 aa13.73□□□□□ -0.21
CCDC40-210ENST00000573903 CPLX2Q6PUV4 134 aaKnown RBP13.73□□□□□ -0.21
CCDC40-210ENST00000573903 KCNT2Q6UVM3 1135 aa13.73□□□□□ -0.21
CCDC40-210ENST00000573903 HFE2Q6ZVN8 426 aa13.73□□□□□ -0.21
CCDC40-210ENST00000573903 MIER3Q7Z3K6 550 aa13.73□□□□□ -0.21
CCDC40-210ENST00000573903 ECHDC2Q86YB7 292 aa13.73□□□□□ -0.21
CCDC40-210ENST00000573903 RDM1Q8NG50 284 aa13.73□□□□□ -0.21
CCDC40-210ENST00000573903 TBCKQ8TEA7 893 aa13.73□□□□□ -0.21
CCDC40-210ENST00000573903 EDAQ92838 391 aa13.73□□□□□ -0.21
CCDC40-210ENST00000573903 SLC5A5Q92911 643 aa13.73□□□□□ -0.21
CCDC40-210ENST00000573903 MRPL9Q9BYD2 267 aaKnown RBP13.73□□□□□ -0.21
CCDC40-210ENST00000573903 ADAMTS10Q9H324 1103 aa13.73□□□□□ -0.21
CCDC40-210ENST00000573903 UNC45AQ9H3U1 944 aa13.73□□□□□ -0.21
CCDC40-210ENST00000573903 NGRNQ9NPE2 291 aaKnown RBP13.73□□□□□ -0.21
CCDC40-210ENST00000573903 LOC730098B7Z3J9 87 aa13.72□□□□□ -0.21
CCDC40-210ENST00000573903 FSCN2O14926 492 aa13.72□□□□□ -0.21
CCDC40-210ENST00000573903 ZNF862O60290 1169 aa13.72□□□□□ -0.21
CCDC40-210ENST00000573903 DARSP14868 501 aaKnown RBP13.72□□□□□ -0.21
CCDC40-210ENST00000573903 ATF7P17544 494 aaPredicted RBP13.72□□□□□ -0.21
CCDC40-210ENST00000573903 PDIA3P30101 505 aaKnown RBP13.72□□□□□ -0.21
CCDC40-210ENST00000573903 CA8P35219 290 aa13.72□□□□□ -0.21
CCDC40-210ENST00000573903 DNM2P50570 870 aa13.72□□□□□ -0.21
CCDC40-210ENST00000573903 MTERF2Q49AM1 385 aa13.72□□□□□ -0.21
CCDC40-210ENST00000573903 TMC7Q7Z402 723 aa13.72□□□□□ -0.21
CCDC40-210ENST00000573903 LINC01465Q8N7H1 131 aa13.72□□□□□ -0.21
CCDC40-210ENST00000573903 ZNF668Q96K58 619 aaPredicted RBP13.72□□□□□ -0.21
CCDC40-210ENST00000573903 RPGRIP1Q96KN7 1286 aa13.72□□□□□ -0.21
CCDC40-210ENST00000573903 CASD1Q96PB1 797 aa13.72□□□□□ -0.21
CCDC40-210ENST00000573903 GCOM2Q9BZD3 368 aaPredicted RBP13.72□□□□□ -0.21
CCDC40-210ENST00000573903 NCOA5Q9HCD5 579 aaKnown RBP13.72□□□□□ -0.21
CCDC40-210ENST00000573903 SPG21Q9NZD8 308 aa13.72□□□□□ -0.21
CCDC40-210ENST00000573903 PCDHA4Q9UN74 947 aa13.72□□□□□ -0.21
CCDC40-210ENST00000573903 CARNS1A5YM72 827 aa13.71□□□□□ -0.21
CCDC40-210ENST00000573903 DEXIO95424 95 aa13.71□□□□□ -0.21
CCDC40-210ENST00000573903 EOMESO95936 686 aa13.71□□□□□ -0.21
CCDC40-210ENST00000573903 SFPQP23246 707 aaKnown RBP eCLIP13.71□□□□□ -0.21
CCDC40-210ENST00000573903 TECP42680 631 aa13.71□□□□□ -0.21
CCDC40-210ENST00000573903 SMC1AQ14683 1233 aaKnown RBP13.71□□□□□ -0.21
CCDC40-210ENST00000573903 CBX2Q14781 532 aaPredicted RBP13.71□□□□□ -0.21
CCDC40-210ENST00000573903 UGCGQ16739 394 aa13.71□□□□□ -0.21
CCDC40-210ENST00000573903 Q4G0T1 1027 aa13.71□□□□□ -0.21
CCDC40-210ENST00000573903 XKR3Q5GH77 459 aa13.71□□□□□ -0.21
CCDC40-210ENST00000573903 LLGL2Q6P1M3 1020 aa13.71□□□□□ -0.21
CCDC40-210ENST00000573903 RUFY3Q7L099 469 aa13.71□□□□□ -0.21
CCDC40-210ENST00000573903 ALYREFQ86V81 257 aaKnown RBP13.71□□□□□ -0.21
CCDC40-210ENST00000573903 SUGP1Q8IWZ8 645 aaKnown RBP13.71□□□□□ -0.21
CCDC40-210ENST00000573903 RSPH1Q8WYR4 309 aa13.71□□□□□ -0.21
CCDC40-210ENST00000573903 FBXL18Q96ME1 805 aa13.71□□□□□ -0.21
CCDC40-210ENST00000573903 INO80BQ9C086 356 aaPredicted RBP13.71□□□□□ -0.21
CCDC40-210ENST00000573903 CYP46A1Q9Y6A2 500 aa13.71□□□□□ -0.21
CCDC40-210ENST00000573903 A0A0U1RQF3 1178 aa13.7□□□□□ -0.22
CCDC40-210ENST00000573903 TMEM221A6NGB7 291 aa13.7□□□□□ -0.22
CCDC40-210ENST00000573903 M0R296 226 aa13.7□□□□□ -0.22
CCDC40-210ENST00000573903 PSMD10O75832 226 aa13.7□□□□□ -0.22
CCDC40-210ENST00000573903 SKIP12755 728 aa13.7□□□□□ -0.22
CCDC40-210ENST00000573903 HOXB8P17481 243 aaPredicted RBP13.7□□□□□ -0.22
CCDC40-210ENST00000573903 ALDH7A1P49419 539 aaKnown RBP13.7□□□□□ -0.22
CCDC40-210ENST00000573903 EVCP57679 992 aa13.7□□□□□ -0.22
CCDC40-210ENST00000573903 TPRNQ4KMQ1 711 aa13.7□□□□□ -0.22
CCDC40-210ENST00000573903 GALNT17Q6IS24 598 aa13.7□□□□□ -0.22
CCDC40-210ENST00000573903 ANKRD54Q6NXT1 300 aa13.7□□□□□ -0.22
CCDC40-210ENST00000573903 TRIM67Q6ZTA4 783 aa13.7□□□□□ -0.22
CCDC40-210ENST00000573903 ZBTB33Q86T24 672 aa13.7□□□□□ -0.22
CCDC40-210ENST00000573903 BLIDQ8IZY5 108 aa13.7□□□□□ -0.22
CCDC40-210ENST00000573903 FAM177A1Q8N128 213 aaPredicted RBP13.7□□□□□ -0.22
CCDC40-210ENST00000573903 TMEM87AQ8NBN3 555 aa13.7□□□□□ -0.22
CCDC40-210ENST00000573903 VN1R2Q8NFZ6 395 aa13.7□□□□□ -0.22
CCDC40-210ENST00000573903 HELQQ8TDG4 1101 aa13.7□□□□□ -0.22
CCDC40-210ENST00000573903 CASP10Q92851 521 aa13.7□□□□□ -0.22
CCDC40-210ENST00000573903 PBXIP1Q96AQ6 731 aa13.7□□□□□ -0.22
CCDC40-210ENST00000573903 TMEM169Q96HH4 297 aa13.7□□□□□ -0.22
CCDC40-210ENST00000573903 JPH2Q9BR39 696 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms