RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 UNC45AQ9H3U1 944 aa24.84■■□□□ 1.57
SNF8-216ENST00000573795 EIF4BP23588 611 aaKnown RBP24.83■■□□□ 1.57
SNF8-216ENST00000573795 GPC3P51654 580 aa24.83■■□□□ 1.57
SNF8-216ENST00000573795 CCT2P78371 535 aaKnown RBP24.83■■□□□ 1.57
SNF8-216ENST00000573795 PLCB3Q01970 1234 aa24.83■■□□□ 1.57
SNF8-216ENST00000573795 AKAP17AQ02040 695 aaKnown RBP24.83■■□□□ 1.57
SNF8-216ENST00000573795 ECHDC2Q86YB7 292 aa24.83■■□□□ 1.57
SNF8-216ENST00000573795 MRPS27Q92552 414 aaKnown RBP24.83■■□□□ 1.57
SNF8-216ENST00000573795 EDAQ92838 391 aa24.83■■□□□ 1.57
SNF8-216ENST00000573795 FBXL18Q96ME1 805 aa24.83■■□□□ 1.57
SNF8-216ENST00000573795 RIT2Q99578 217 aa24.83■■□□□ 1.57
SNF8-216ENST00000573795 CDCA3Q99618 268 aaPredicted RBP24.83■■□□□ 1.57
SNF8-216ENST00000573795 LZTS1Q9Y250 596 aa24.83■■□□□ 1.57
SNF8-216ENST00000573795 CHMP2AO43633 222 aa24.82■■□□□ 1.56
SNF8-216ENST00000573795 PBX3P40426 434 aa24.82■■□□□ 1.56
SNF8-216ENST00000573795 USP11P51784 963 aa24.82■■□□□ 1.56
SNF8-216ENST00000573795 DRP2Q13474 957 aa24.82■■□□□ 1.56
SNF8-216ENST00000573795 TARBP2Q15633 366 aaKnown RBP24.82■■□□□ 1.56
SNF8-216ENST00000573795 CLLU1OSQ5K130 101 aa24.82■■□□□ 1.56
SNF8-216ENST00000573795 PLPP4Q5VZY2 271 aa24.82■■□□□ 1.56
SNF8-216ENST00000573795 GAS7O60861 476 aa24.81■■□□□ 1.56
SNF8-216ENST00000573795 DARSP14868 501 aaKnown RBP24.81■■□□□ 1.56
SNF8-216ENST00000573795 ATF7P17544 494 aaPredicted RBP24.81■■□□□ 1.56
SNF8-216ENST00000573795 FGFR4P22455 802 aa24.81■■□□□ 1.56
SNF8-216ENST00000573795 TMOD1P28289 359 aa24.81■■□□□ 1.56
SNF8-216ENST00000573795 TOB2Q14106 344 aaPredicted RBP24.81■■□□□ 1.56
SNF8-216ENST00000573795 LRCH2Q5VUJ6 765 aa24.81■■□□□ 1.56
SNF8-216ENST00000573795 PDE12Q6L8Q7 609 aaKnown RBP24.81■■□□□ 1.56
SNF8-216ENST00000573795 KCNT2Q6UVM3 1135 aa24.81■■□□□ 1.56
SNF8-216ENST00000573795 B3GNT9Q6UX72 402 aa24.81■■□□□ 1.56
SNF8-216ENST00000573795 ZNF598Q86UK7 904 aaKnown RBP24.81■■□□□ 1.56
SNF8-216ENST00000573795 LRRC43Q8N309 656 aa24.81■■□□□ 1.56
SNF8-216ENST00000573795 TBCKQ8TEA7 893 aa24.81■■□□□ 1.56
SNF8-216ENST00000573795 CEP89Q96ST8 783 aa24.81■■□□□ 1.56
SNF8-216ENST00000573795 PHF7Q9BWX1 381 aaPredicted RBP24.81■■□□□ 1.56
SNF8-216ENST00000573795 SH3GLB2Q9NR46 395 aa24.81■■□□□ 1.56
SNF8-216ENST00000573795 NRBP2Q9NSY0 501 aa24.81■■□□□ 1.56
SNF8-216ENST00000573795 HIDE1A8MVS5 230 aa24.8■■□□□ 1.56
SNF8-216ENST00000573795 M0R2N6 131 aa24.8■■□□□ 1.56
SNF8-216ENST00000573795 HOXA2O43364 376 aa24.8■■□□□ 1.56
SNF8-216ENST00000573795 PSMD10O75832 226 aa24.8■■□□□ 1.56
SNF8-216ENST00000573795 STBD1O95210 358 aa24.8■■□□□ 1.56
SNF8-216ENST00000573795 SFNP31947 248 aa24.8■■□□□ 1.56
SNF8-216ENST00000573795 JAK3P52333 1124 aa24.8■■□□□ 1.56
SNF8-216ENST00000573795 NHLH1Q02575 133 aa24.8■■□□□ 1.56
SNF8-216ENST00000573795 TMEM184AQ6ZMB5 413 aa24.8■■□□□ 1.56
SNF8-216ENST00000573795 ALYREFQ86V81 257 aaKnown RBP24.8■■□□□ 1.56
SNF8-216ENST00000573795 TCF25Q9BQ70 676 aa24.8■■□□□ 1.56
SNF8-216ENST00000573795 TEKT3Q9BXF9 490 aa24.8■■□□□ 1.56
SNF8-216ENST00000573795 S1PR5Q9H228 398 aa24.8■■□□□ 1.56
SNF8-216ENST00000573795 KCNH6Q9H252 994 aa24.8■■□□□ 1.56
SNF8-216ENST00000573795 TMEM150BA6NC51 233 aa24.79■■□□□ 1.56
SNF8-216ENST00000573795 TDP2O95551 362 aa24.79■■□□□ 1.56
SNF8-216ENST00000573795 ZSCAN20P17040 1043 aaPredicted RBP24.79■■□□□ 1.56
SNF8-216ENST00000573795 NPY5RQ15761 445 aa24.79■■□□□ 1.56
SNF8-216ENST00000573795 Q4G0T1 1027 aa24.79■■□□□ 1.56
SNF8-216ENST00000573795 ZNF710Q8N1W2 664 aa24.79■■□□□ 1.56
SNF8-216ENST00000573795 A0A0U1RQF3 1178 aa24.78■■□□□ 1.56
SNF8-216ENST00000573795 FSD2A1L4K1 749 aa24.78■■□□□ 1.56
SNF8-216ENST00000573795 CSDE1O75534 798 aaKnown RBP24.78■■□□□ 1.56
SNF8-216ENST00000573795 PSMA5P28066 241 aa24.78■■□□□ 1.56
SNF8-216ENST00000573795 NLRP5P59047 1200 aa24.78■■□□□ 1.56
SNF8-216ENST00000573795 TBC1D8BQ0IIM8 1120 aa24.78■■□□□ 1.56
SNF8-216ENST00000573795 SYCE2Q6PIF2 218 aa24.78■■□□□ 1.56
SNF8-216ENST00000573795 TRIM67Q6ZTA4 783 aa24.78■■□□□ 1.56
SNF8-216ENST00000573795 ZNF558Q96NG5 402 aa24.78■■□□□ 1.56
SNF8-216ENST00000573795 PCDHA4Q9UN74 947 aa24.78■■□□□ 1.56
SNF8-216ENST00000573795 KMT2EQ8IZD2 1858 aa24.77■■□□□ 1.56
SNF8-216ENST00000573795 CYP3A7-CYP3A51PA0A087WV96 503 aa24.77■■□□□ 1.56
SNF8-216ENST00000573795 IGKV6-21A0A0C4DH24 114 aa24.77■■□□□ 1.56
SNF8-216ENST00000573795 CYP3A7P24462 503 aa24.77■■□□□ 1.56
SNF8-216ENST00000573795 ZXDAP98168 799 aa24.77■■□□□ 1.56
SNF8-216ENST00000573795 ANKRD54Q6NXT1 300 aa24.77■■□□□ 1.56
SNF8-216ENST00000573795 BMP8AQ7Z5Y6 402 aa24.77■■□□□ 1.56
SNF8-216ENST00000573795 RNF169Q8NCN4 708 aa24.77■■□□□ 1.56
SNF8-216ENST00000573795 RDM1Q8NG50 284 aa24.77■■□□□ 1.56
SNF8-216ENST00000573795 RPGRIP1Q96KN7 1286 aa24.77■■□□□ 1.56
SNF8-216ENST00000573795 MFSD14AQ96MC6 490 aa24.77■■□□□ 1.56
SNF8-216ENST00000573795 MBOAT7Q96N66 472 aa24.77■■□□□ 1.56
SNF8-216ENST00000573795 NIFKQ9BYG3 293 aaKnown RBP24.77■■□□□ 1.56
SNF8-216ENST00000573795 ENTPD7Q9NQZ7 604 aa24.77■■□□□ 1.56
SNF8-216ENST00000573795 TMEM221A6NGB7 291 aa24.76■■□□□ 1.55
SNF8-216ENST00000573795 M0R296 226 aa24.76■■□□□ 1.55
SNF8-216ENST00000573795 PPM1AP35813 382 aa24.76■■□□□ 1.55
SNF8-216ENST00000573795 TECP42680 631 aa24.76■■□□□ 1.55
SNF8-216ENST00000573795 MTERF2Q49AM1 385 aa24.76■■□□□ 1.55
SNF8-216ENST00000573795 RUFY3Q7L099 469 aa24.76■■□□□ 1.55
SNF8-216ENST00000573795 MIER3Q7Z3K6 550 aa24.76■■□□□ 1.55
SNF8-216ENST00000573795 ABI1Q8IZP0 508 aa24.76■■□□□ 1.55
SNF8-216ENST00000573795 SLC39A11Q8N1S5 342 aa24.76■■□□□ 1.55
SNF8-216ENST00000573795 ETNPPLQ8TBG4 499 aa24.76■■□□□ 1.55
SNF8-216ENST00000573795 HELQQ8TDG4 1101 aa24.76■■□□□ 1.55
SNF8-216ENST00000573795 NLRP7Q8WX94 980 aa24.76■■□□□ 1.55
SNF8-216ENST00000573795 SH2D3AQ9BRG2 576 aa24.76■■□□□ 1.55
SNF8-216ENST00000573795 ZSWIM6Q9HCJ5 1215 aa24.76■■□□□ 1.55
SNF8-216ENST00000573795 NGRNQ9NPE2 291 aaKnown RBP24.76■■□□□ 1.55
SNF8-216ENST00000573795 SEPT9Q9UHD8 586 aaPredicted RBP24.76■■□□□ 1.55
SNF8-216ENST00000573795 PUF60Q9UHX1 559 aaKnown RBP24.76■■□□□ 1.55
SNF8-216ENST00000573795 XKR3Q5GH77 459 aa24.75■■□□□ 1.55
SNF8-216ENST00000573795 LLGL2Q6P1M3 1020 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms