RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 REXO1Q8N1G1 1221 aaKnown RBP11.17□□□□□ -0.62
TRAPPC1-205ENST00000572656 CCDC12Q8WUD4 166 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC1-205ENST00000572656 NRBP2Q9NSY0 501 aa11.17□□□□□ -0.62
TRAPPC1-205ENST00000572656 SPG21Q9NZD8 308 aa11.17□□□□□ -0.62
TRAPPC1-205ENST00000572656 NAP1L2Q9ULW6 460 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC1-205ENST00000572656 AKT3Q9Y243 479 aa11.17□□□□□ -0.62
TRAPPC1-205ENST00000572656 SAMM50Q9Y512 469 aa11.17□□□□□ -0.62
TRAPPC1-205ENST00000572656 ATG2AQ2TAZ0 1938 aa11.17□□□□□ -0.62
TRAPPC1-205ENST00000572656 A0A0U1RQF3 1178 aa11.16□□□□□ -0.62
TRAPPC1-205ENST00000572656 WDR64B1ANS9 1081 aa11.16□□□□□ -0.62
TRAPPC1-205ENST00000572656 EOMESO95936 686 aa11.16□□□□□ -0.62
TRAPPC1-205ENST00000572656 OATP04181 439 aa11.16□□□□□ -0.62
TRAPPC1-205ENST00000572656 GNA11P29992 359 aa11.16□□□□□ -0.62
TRAPPC1-205ENST00000572656 PBX3P40426 434 aa11.16□□□□□ -0.62
TRAPPC1-205ENST00000572656 BMP2KLQ5H9B9 411 aa11.16□□□□□ -0.62
TRAPPC1-205ENST00000572656 LRRC71Q8N4P6 559 aa11.16□□□□□ -0.62
TRAPPC1-205ENST00000572656 MRPL43Q8N983 215 aaKnown RBP11.16□□□□□ -0.62
TRAPPC1-205ENST00000572656 CASP10Q92851 521 aa11.16□□□□□ -0.62
TRAPPC1-205ENST00000572656 LENG9Q96B70 501 aa11.16□□□□□ -0.62
TRAPPC1-205ENST00000572656 APOL5Q9BWW9 433 aa11.16□□□□□ -0.62
TRAPPC1-205ENST00000572656 NR2E1Q9Y466 385 aa11.16□□□□□ -0.62
TRAPPC1-205ENST00000572656 PRPF3O43395 683 aaKnown RBP11.15□□□□□ -0.62
TRAPPC1-205ENST00000572656 ZNF862O60290 1169 aa11.15□□□□□ -0.62
TRAPPC1-205ENST00000572656 DARSP14868 501 aaKnown RBP11.15□□□□□ -0.62
TRAPPC1-205ENST00000572656 AVPR2P30518 371 aa11.15□□□□□ -0.62
TRAPPC1-205ENST00000572656 GPC3P51654 580 aa11.15□□□□□ -0.62
TRAPPC1-205ENST00000572656 VCPP55072 806 aaKnown RBP11.15□□□□□ -0.62
TRAPPC1-205ENST00000572656 FGD1P98174 961 aa11.15□□□□□ -0.62
TRAPPC1-205ENST00000572656 SMC1AQ14683 1233 aaKnown RBP11.15□□□□□ -0.62
TRAPPC1-205ENST00000572656 TPRNQ4KMQ1 711 aa11.15□□□□□ -0.62
TRAPPC1-205ENST00000572656 CLLU1OSQ5K130 101 aa11.15□□□□□ -0.62
TRAPPC1-205ENST00000572656 CES5AQ6NT32 575 aa11.15□□□□□ -0.62
TRAPPC1-205ENST00000572656 ZBTB33Q86T24 672 aa11.15□□□□□ -0.62
TRAPPC1-205ENST00000572656 ZNF598Q86UK7 904 aaKnown RBP11.15□□□□□ -0.62
TRAPPC1-205ENST00000572656 SLC39A11Q8N1S5 342 aa11.15□□□□□ -0.62
TRAPPC1-205ENST00000572656 RNF169Q8NCN4 708 aa11.15□□□□□ -0.62
TRAPPC1-205ENST00000572656 BICD2Q8TD16 824 aa11.15□□□□□ -0.62
TRAPPC1-205ENST00000572656 NECTIN4Q96NY8 510 aa11.15□□□□□ -0.62
TRAPPC1-205ENST00000572656 IRF2BPLQ9H1B7 796 aa11.15□□□□□ -0.62
TRAPPC1-205ENST00000572656 ADAM7Q9H2U9 754 aa11.15□□□□□ -0.62
TRAPPC1-205ENST00000572656 DISC1Q9NRI5 854 aa11.15□□□□□ -0.62
TRAPPC1-205ENST00000572656 KAT6AQ92794 2004 aa11.14□□□□□ -0.63
TRAPPC1-205ENST00000572656 TECTAO75443 2155 aa11.14□□□□□ -0.63
TRAPPC1-205ENST00000572656 C2orf71A6NGG8 1288 aa11.14□□□□□ -0.63
TRAPPC1-205ENST00000572656 MSH4O15457 936 aa11.14□□□□□ -0.63
TRAPPC1-205ENST00000572656 ST18O60284 1047 aa11.14□□□□□ -0.63
TRAPPC1-205ENST00000572656 SFNP31947 248 aa11.14□□□□□ -0.63
TRAPPC1-205ENST00000572656 NUBP1P53384 320 aa11.14□□□□□ -0.63
TRAPPC1-205ENST00000572656 CDC42EP1Q00587 391 aa11.14□□□□□ -0.63
TRAPPC1-205ENST00000572656 PRKCEQ02156 737 aa11.14□□□□□ -0.63
TRAPPC1-205ENST00000572656 ITIH3Q06033 890 aa11.14□□□□□ -0.63
TRAPPC1-205ENST00000572656 KREMEN2Q8NCW0 462 aa11.14□□□□□ -0.63
TRAPPC1-205ENST00000572656 HELQQ8TDG4 1101 aa11.14□□□□□ -0.63
TRAPPC1-205ENST00000572656 ZNF668Q96K58 619 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC1-205ENST00000572656 RIPOR3Q96MK2 946 aa11.14□□□□□ -0.63
TRAPPC1-205ENST00000572656 SCLT1Q96NL6 688 aa11.14□□□□□ -0.63
TRAPPC1-205ENST00000572656 RIT2Q99578 217 aa11.14□□□□□ -0.63
TRAPPC1-205ENST00000572656 MRPL9Q9BYD2 267 aaKnown RBP11.14□□□□□ -0.63
TRAPPC1-205ENST00000572656 TSHZ2Q9NRE2 1034 aa11.14□□□□□ -0.63
TRAPPC1-205ENST00000572656 DACT1Q9NYF0 836 aa11.14□□□□□ -0.63
TRAPPC1-205ENST00000572656 HCFC2Q9Y5Z7 792 aa11.14□□□□□ -0.63
TRAPPC1-205ENST00000572656 KIAA1671Q9BY89 1806 aa11.14□□□□□ -0.63
TRAPPC1-205ENST00000572656 ZNF318Q5VUA4 2279 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 EDIL3O43854 480 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 GAS7O60861 476 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 CLASP2O75122 1294 aaKnown RBP11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 CXCL14O95715 111 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 CPA1P15085 419 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 FGFR4P22455 802 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 SP100P23497 879 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 ALDH7A1P49419 539 aaKnown RBP11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 USP11P51784 963 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 JAK3P52333 1124 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 BCAR1P56945 870 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 AKAP17AQ02040 695 aaKnown RBP11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 TBC1D8BQ0IIM8 1120 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 MTMR3Q13615 1198 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 BMS1Q14692 1282 aaKnown RBP11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 TARBP2Q15633 366 aaKnown RBP11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 UGCGQ16739 394 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 Q6ZUG5 572 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 UBALD2Q8IYN6 164 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 CCDC148Q8NFR7 591 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 NLRP7Q8WX94 980 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 RSPH1Q8WYR4 309 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 SLC5A5Q92911 643 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 KCNB2Q92953 911 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 BRF1Q92994 677 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 PHKBQ93100 1093 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 CCDC136Q96JN2 1154 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 GCOM2Q9BZD3 368 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 CHST12Q9NRB3 414 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 CDH22Q9UJ99 828 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 SORCS3Q9UPU3 1222 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 NID2Q14112 1375 aa11.13□□□□□ -0.63
TRAPPC1-205ENST00000572656 CARNS1A5YM72 827 aa11.12□□□□□ -0.63
TRAPPC1-205ENST00000572656 C2CD4DB7Z1M9 353 aa11.12□□□□□ -0.63
TRAPPC1-205ENST00000572656 NT5C1B-RDH14C9J2C7 533 aa11.12□□□□□ -0.63
TRAPPC1-205ENST00000572656 CHMP2AO43633 222 aa11.12□□□□□ -0.63
TRAPPC1-205ENST00000572656 PDGFBP01127 241 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms