RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 NECAB1Q8N987 351 aa19.48■□□□□ 0.71
LITAF-211ENST00000572255 FAM20AQ96MK3 541 aa19.48■□□□□ 0.71
LITAF-211ENST00000572255 CEP89Q96ST8 783 aa19.48■□□□□ 0.71
LITAF-211ENST00000572255 SH2D3AQ9BRG2 576 aa19.48■□□□□ 0.71
LITAF-211ENST00000572255 ELAC1Q9H777 363 aaKnown RBP19.48■□□□□ 0.71
LITAF-211ENST00000572255 KCNMB3Q9NPA1 279 aa19.48■□□□□ 0.71
LITAF-211ENST00000572255 CD320Q9NPF0 282 aa19.48■□□□□ 0.71
LITAF-211ENST00000572255 VAV3Q9UKW4 847 aa19.48■□□□□ 0.71
LITAF-211ENST00000572255 DDX11L8A8MPP1 907 aa19.47■□□□□ 0.71
LITAF-211ENST00000572255 EML1O00423 815 aa19.47■□□□□ 0.71
LITAF-211ENST00000572255 GTF2F1P35269 517 aaKnown RBP eCLIP19.47■□□□□ 0.71
LITAF-211ENST00000572255 LTBRP36941 435 aa19.47■□□□□ 0.71
LITAF-211ENST00000572255 PPP2R5CQ13362 524 aa19.47■□□□□ 0.71
LITAF-211ENST00000572255 PIK3AP1Q6ZUJ8 805 aa19.47■□□□□ 0.71
LITAF-211ENST00000572255 POF1BQ8WVV4 589 aa19.47■□□□□ 0.71
LITAF-211ENST00000572255 NLRP7Q8WX94 980 aa19.47■□□□□ 0.71
LITAF-211ENST00000572255 WASF1Q92558 559 aa19.47■□□□□ 0.71
LITAF-211ENST00000572255 IGFLR1Q9H665 355 aa19.47■□□□□ 0.71
LITAF-211ENST00000572255 AAASQ9NRG9 546 aa19.47■□□□□ 0.71
LITAF-211ENST00000572255 HCSTQ9UBK5 93 aa19.47■□□□□ 0.71
LITAF-211ENST00000572255 PCDHB12Q9Y5F1 795 aa19.47■□□□□ 0.71
LITAF-211ENST00000572255 IGKV6-21A0A0C4DH24 114 aa19.46■□□□□ 0.71
LITAF-211ENST00000572255 CCNT1O60563 726 aaKnown RBP19.46■□□□□ 0.71
LITAF-211ENST00000572255 LARGE1O95461 756 aa19.46■□□□□ 0.71
LITAF-211ENST00000572255 FDPSP14324 419 aaKnown RBP19.46■□□□□ 0.71
LITAF-211ENST00000572255 ZSCAN20P17040 1043 aaPredicted RBP19.46■□□□□ 0.71
LITAF-211ENST00000572255 IRS1P35568 1242 aa19.46■□□□□ 0.71
LITAF-211ENST00000572255 PSMC5P62195 406 aa19.46■□□□□ 0.71
LITAF-211ENST00000572255 ME3Q16798 604 aa19.46■□□□□ 0.71
LITAF-211ENST00000572255 KHSRPQ92945 711 aaKnown RBP eCLIP19.46■□□□□ 0.71
LITAF-211ENST00000572255 GTF3C6Q969F1 213 aa19.46■□□□□ 0.71
LITAF-211ENST00000572255 PPP2R3CQ969Q6 453 aa19.46■□□□□ 0.71
LITAF-211ENST00000572255 NAP1L4Q99733 375 aaKnown RBP19.46■□□□□ 0.71
LITAF-211ENST00000572255 C1QTNF1Q9BXJ1 281 aa19.46■□□□□ 0.71
LITAF-211ENST00000572255 EPHX3Q9H6B9 360 aa19.46■□□□□ 0.71
LITAF-211ENST00000572255 TYW1Q9NV66 732 aaKnown RBP19.46■□□□□ 0.71
LITAF-211ENST00000572255 FAM50BQ9Y247 325 aa19.46■□□□□ 0.71
LITAF-211ENST00000572255 COL9A1P20849 921 aa19.45■□□□□ 0.7
LITAF-211ENST00000572255 FGFR4P22455 802 aa19.45■□□□□ 0.7
LITAF-211ENST00000572255 DNM2P50570 870 aa19.45■□□□□ 0.7
LITAF-211ENST00000572255 DLX2Q07687 328 aaPredicted RBP19.45■□□□□ 0.7
LITAF-211ENST00000572255 EARS2Q5JPH6 523 aaKnown RBP19.45■□□□□ 0.7
LITAF-211ENST00000572255 PLA2G4FQ68DD2 849 aa19.45■□□□□ 0.7
LITAF-211ENST00000572255 ANO5Q75V66 913 aa19.45■□□□□ 0.7
LITAF-211ENST00000572255 ADGRD2Q7Z7M1 963 aa19.45■□□□□ 0.7
LITAF-211ENST00000572255 ECHDC2Q86YB7 292 aa19.45■□□□□ 0.7
LITAF-211ENST00000572255 GCOM2Q9BZD3 368 aaPredicted RBP19.45■□□□□ 0.7
LITAF-211ENST00000572255 TMEM117Q9H0C3 514 aa19.45■□□□□ 0.7
LITAF-211ENST00000572255 RNF19AQ9NV58 838 aa19.45■□□□□ 0.7
LITAF-211ENST00000572255 FAM205CA6NFA0 338 aa19.44■□□□□ 0.7
LITAF-211ENST00000572255 TBX3O15119 743 aa19.44■□□□□ 0.7
LITAF-211ENST00000572255 LINC01565O15544 149 aa19.44■□□□□ 0.7
LITAF-211ENST00000572255 HOXA2O43364 376 aa19.44■□□□□ 0.7
LITAF-211ENST00000572255 EIF5BO60841 1220 aaKnown RBP19.44■□□□□ 0.7
LITAF-211ENST00000572255 MAFO75444 373 aaPredicted RBP19.44■□□□□ 0.7
LITAF-211ENST00000572255 CSDE1O75534 798 aaKnown RBP19.44■□□□□ 0.7
LITAF-211ENST00000572255 KRT2P35908 639 aa19.44■□□□□ 0.7
LITAF-211ENST00000572255 QARSP47897 775 aaKnown RBP19.44■□□□□ 0.7
LITAF-211ENST00000572255 CDC42EP1Q00587 391 aa19.44■□□□□ 0.7
LITAF-211ENST00000572255 NR5A1Q13285 461 aa19.44■□□□□ 0.7
LITAF-211ENST00000572255 CLUL1Q15846 466 aa19.44■□□□□ 0.7
LITAF-211ENST00000572255 POTEDQ86YR6 584 aa19.44■□□□□ 0.7
LITAF-211ENST00000572255 GJD3Q8N144 294 aa19.44■□□□□ 0.7
LITAF-211ENST00000572255 COLGALT1Q8NBJ5 622 aa19.44■□□□□ 0.7
LITAF-211ENST00000572255 HAS1Q92839 578 aa19.44■□□□□ 0.7
LITAF-211ENST00000572255 CWH43Q9H720 699 aa19.44■□□□□ 0.7
LITAF-211ENST00000572255 SUCLA2Q9P2R7 463 aaPredicted RBP19.44■□□□□ 0.7
LITAF-211ENST00000572255 A0A087WZ62 844 aa19.43■□□□□ 0.7
LITAF-211ENST00000572255 MARCH6O60337 910 aa19.43■□□□□ 0.7
LITAF-211ENST00000572255 DKC1O60832 514 aaKnown RBP eCLIP19.43■□□□□ 0.7
LITAF-211ENST00000572255 TBX10O75333 385 aa19.43■□□□□ 0.7
LITAF-211ENST00000572255 FGF18O76093 207 aa19.43■□□□□ 0.7
LITAF-211ENST00000572255 LAG3P18627 525 aa19.43■□□□□ 0.7
LITAF-211ENST00000572255 SSTR3P32745 418 aaPredicted RBP19.43■□□□□ 0.7
LITAF-211ENST00000572255 NEK4P51957 841 aa19.43■□□□□ 0.7
LITAF-211ENST00000572255 UBE3AQ05086 875 aa19.43■□□□□ 0.7
LITAF-211ENST00000572255 ADAM15Q13444 863 aa19.43■□□□□ 0.7
LITAF-211ENST00000572255 CSPP1Q1MSJ5 1256 aa19.43■□□□□ 0.7
LITAF-211ENST00000572255 THNSL1Q8IYQ7 743 aa19.43■□□□□ 0.7
LITAF-211ENST00000572255 RNF169Q8NCN4 708 aa19.43■□□□□ 0.7
LITAF-211ENST00000572255 NSUN7Q8NE18 718 aaKnown RBP19.43■□□□□ 0.7
LITAF-211ENST00000572255 CASD1Q96PB1 797 aa19.43■□□□□ 0.7
LITAF-211ENST00000572255 JPH2Q9BR39 696 aaPredicted RBP19.43■□□□□ 0.7
LITAF-211ENST00000572255 FDXACB1Q9BRP7 624 aaPredicted RBP19.43■□□□□ 0.7
LITAF-211ENST00000572255 BRMS1Q9HCU9 246 aa19.43■□□□□ 0.7
LITAF-211ENST00000572255 CYP26B1Q9NR63 512 aa19.43■□□□□ 0.7
LITAF-211ENST00000572255 PCDHGC5Q9Y5F6 944 aa19.43■□□□□ 0.7
LITAF-211ENST00000572255 C5orf42Q9H799 3197 aa19.42■□□□□ 0.7
LITAF-211ENST00000572255 A0A0U1RQF3 1178 aa19.42■□□□□ 0.7
LITAF-211ENST00000572255 P4HBP07237 508 aaKnown RBP19.42■□□□□ 0.7
LITAF-211ENST00000572255 NPEPPSP55786 919 aa19.42■□□□□ 0.7
LITAF-211ENST00000572255 LRRC55Q6ZSA7 311 aa19.42■□□□□ 0.7
LITAF-211ENST00000572255 ZNF410Q86VK4 478 aa19.42■□□□□ 0.7
LITAF-211ENST00000572255 RHPN2Q8IUC4 686 aa19.42■□□□□ 0.7
LITAF-211ENST00000572255 ABI1Q8IZP0 508 aa19.42■□□□□ 0.7
LITAF-211ENST00000572255 TNFRSF25Q93038 417 aa19.42■□□□□ 0.7
LITAF-211ENST00000572255 DACT1Q9NYF0 836 aa19.42■□□□□ 0.7
LITAF-211ENST00000572255 WRAP73Q9P2S5 460 aaPredicted RBP19.42■□□□□ 0.7
LITAF-211ENST00000572255 SEC24BO95487 1268 aa19.41■□□□□ 0.7
LITAF-211ENST00000572255 SFPQP23246 707 aaKnown RBP eCLIP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms