RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 ATP6V0A4Q9HBG4 840 aa18.01■□□□□ 0.47
LITAF-210ENST00000571976 BMP2KQ9NSY1 1161 aaPredicted RBP18.01■□□□□ 0.47
LITAF-210ENST00000571976 DNM3Q9UQ16 869 aa18.01■□□□□ 0.47
LITAF-210ENST00000571976 NOC2LQ9Y3T9 749 aaKnown RBP18.01■□□□□ 0.47
LITAF-210ENST00000571976 SRPRBQ9Y5M8 271 aaKnown RBP18.01■□□□□ 0.47
LITAF-210ENST00000571976 MORC2Q9Y6X9 1032 aaPredicted RBP18.01■□□□□ 0.47
LITAF-210ENST00000571976 GRXCR1A8MXD5 290 aa18■□□□□ 0.47
LITAF-210ENST00000571976 AMHP03971 560 aa18■□□□□ 0.47
LITAF-210ENST00000571976 DARSP14868 501 aaKnown RBP18■□□□□ 0.47
LITAF-210ENST00000571976 UBA7P41226 1012 aa18■□□□□ 0.47
LITAF-210ENST00000571976 NASPP49321 788 aaPredicted RBP18■□□□□ 0.47
LITAF-210ENST00000571976 NFX1Q12986 1120 aaKnown RBP18■□□□□ 0.47
LITAF-210ENST00000571976 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18■□□□□ 0.47
LITAF-210ENST00000571976 GCOM2Q9BZD3 368 aaPredicted RBP18■□□□□ 0.47
LITAF-210ENST00000571976 NT5C3AQ9H0P0 336 aa18■□□□□ 0.47
LITAF-210ENST00000571976 ERVK-5Q9HDB9 667 aa18■□□□□ 0.47
LITAF-210ENST00000571976 XPNPEP1Q9NQW7 623 aa18■□□□□ 0.47
LITAF-210ENST00000571976 COL4A3BPQ9Y5P4 624 aa18■□□□□ 0.47
LITAF-210ENST00000571976 ARID2Q68CP9 1835 aa18■□□□□ 0.47
LITAF-210ENST00000571976 A0A087WZ62 844 aa17.99■□□□□ 0.47
LITAF-210ENST00000571976 RBAK-RBAKDNI3L0D1 243 aa17.99■□□□□ 0.47
LITAF-210ENST00000571976 USO1O60763 962 aaKnown RBP17.99■□□□□ 0.47
LITAF-210ENST00000571976 MARCKSP29966 332 aaPredicted RBP17.99■□□□□ 0.47
LITAF-210ENST00000571976 DEFB103AP81534 67 aa17.99■□□□□ 0.47
LITAF-210ENST00000571976 GRIN1Q05586 938 aa17.99■□□□□ 0.47
LITAF-210ENST00000571976 LAMTOR4Q0VGL1 99 aa17.99■□□□□ 0.47
LITAF-210ENST00000571976 MXD4Q14582 209 aaPredicted RBP17.99■□□□□ 0.47
LITAF-210ENST00000571976 ZRSR1Q15695 479 aaKnown RBP17.99■□□□□ 0.47
LITAF-210ENST00000571976 ATL3Q6DD88 541 aa17.99■□□□□ 0.47
LITAF-210ENST00000571976 CABP7Q86V35 215 aa17.99■□□□□ 0.47
LITAF-210ENST00000571976 FAM228AQ86W67 206 aa17.99■□□□□ 0.47
LITAF-210ENST00000571976 KSR1Q8IVT5 923 aa17.99■□□□□ 0.47
LITAF-210ENST00000571976 HERC6Q8IVU3 1022 aa17.99■□□□□ 0.47
LITAF-210ENST00000571976 MCPH1Q8NEM0 835 aa17.99■□□□□ 0.47
LITAF-210ENST00000571976 CDK5RAP3Q96JB5 506 aa17.99■□□□□ 0.47
LITAF-210ENST00000571976 ZNF668Q96K58 619 aaPredicted RBP17.99■□□□□ 0.47
LITAF-210ENST00000571976 NLRP4Q96MN2 994 aa17.99■□□□□ 0.47
LITAF-210ENST00000571976 FDXACB1Q9BRP7 624 aaPredicted RBP17.99■□□□□ 0.47
LITAF-210ENST00000571976 INO80BQ9C086 356 aaPredicted RBP17.99■□□□□ 0.47
LITAF-210ENST00000571976 BHMT2Q9H2M3 363 aa17.99■□□□□ 0.47
LITAF-210ENST00000571976 TFIP11Q9UBB9 837 aaKnown RBP17.99■□□□□ 0.47
LITAF-210ENST00000571976 MSRAQ9UJ68 235 aa17.99■□□□□ 0.47
LITAF-210ENST00000571976 FBXO2Q9UK22 296 aaPredicted RBP17.99■□□□□ 0.47
LITAF-210ENST00000571976 ST3GAL5Q9UNP4 418 aa17.99■□□□□ 0.47
LITAF-210ENST00000571976 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.98■□□□□ 0.47
LITAF-210ENST00000571976 E9PMD0 336 aa17.98■□□□□ 0.47
LITAF-210ENST00000571976 ENPP3O14638 875 aa17.98■□□□□ 0.47
LITAF-210ENST00000571976 EYA4O95677 639 aa17.98■□□□□ 0.47
LITAF-210ENST00000571976 BRD1O95696 1058 aa17.98■□□□□ 0.47
LITAF-210ENST00000571976 CYP11B2P19099 503 aa17.98■□□□□ 0.47
LITAF-210ENST00000571976 DNAJB2P25686 324 aa17.98■□□□□ 0.47
LITAF-210ENST00000571976 ARL2P36404 184 aa17.98■□□□□ 0.47
LITAF-210ENST00000571976 STK38Q15208 465 aa17.98■□□□□ 0.47
LITAF-210ENST00000571976 RAB30Q15771 203 aa17.98■□□□□ 0.47
LITAF-210ENST00000571976 PADI6Q6TGC4 694 aa17.98■□□□□ 0.47
LITAF-210ENST00000571976 LINC00301Q8NCQ3 95 aa17.98■□□□□ 0.47
LITAF-210ENST00000571976 CALML4Q96GE6 196 aa17.98■□□□□ 0.47
LITAF-210ENST00000571976 PNMA5Q96PV4 448 aa17.98■□□□□ 0.47
LITAF-210ENST00000571976 PBX4Q9BYU1 374 aa17.98■□□□□ 0.47
LITAF-210ENST00000571976 PCDHA11Q9Y5I1 949 aa17.98■□□□□ 0.47
LITAF-210ENST00000571976 YEATS4O95619 227 aa17.97■□□□□ 0.47
LITAF-210ENST00000571976 PBX2P40425 430 aa17.97■□□□□ 0.47
LITAF-210ENST00000571976 GRB10Q13322 594 aa17.97■□□□□ 0.47
LITAF-210ENST00000571976 MYOCDQ8IZQ8 938 aa17.97■□□□□ 0.47
LITAF-210ENST00000571976 KRI1Q8N9T8 703 aaKnown RBP17.97■□□□□ 0.47
LITAF-210ENST00000571976 TOP1MTQ969P6 601 aa17.97■□□□□ 0.47
LITAF-210ENST00000571976 ZBED2Q9BTP6 218 aa17.97■□□□□ 0.47
LITAF-210ENST00000571976 CSRNP2Q9H175 543 aa17.97■□□□□ 0.47
LITAF-210ENST00000571976 TMX1Q9H3N1 280 aa17.97■□□□□ 0.47
LITAF-210ENST00000571976 CFAP45Q9UL16 551 aa17.97■□□□□ 0.47
LITAF-210ENST00000571976 MICAL3Q7RTP6 2002 aa17.97■□□□□ 0.47
LITAF-210ENST00000571976 LOXHD1Q8IVV2 1947 aa17.97■□□□□ 0.47
LITAF-210ENST00000571976 TMEM265A0A087WTH1 108 aa17.96■□□□□ 0.47
LITAF-210ENST00000571976 GJB5O95377 273 aa17.96■□□□□ 0.47
LITAF-210ENST00000571976 SRGAP2CP0DJJ0 459 aa17.96■□□□□ 0.47
LITAF-210ENST00000571976 RABGGTBP53611 331 aa17.96■□□□□ 0.47
LITAF-210ENST00000571976 POU5F1BQ06416 359 aa17.96■□□□□ 0.47
LITAF-210ENST00000571976 TFDP1Q14186 410 aa17.96■□□□□ 0.47
LITAF-210ENST00000571976 TMEM119Q4V9L6 283 aa17.96■□□□□ 0.47
LITAF-210ENST00000571976 MAEAQ7L5Y9 396 aa17.96■□□□□ 0.47
LITAF-210ENST00000571976 SRGAP1Q7Z6B7 1085 aa17.96■□□□□ 0.47
LITAF-210ENST00000571976 RTN4RL1Q86UN2 441 aaPredicted RBP17.96■□□□□ 0.47
LITAF-210ENST00000571976 RNF149Q8NC42 400 aa17.96■□□□□ 0.47
LITAF-210ENST00000571976 TIFAQ96CG3 184 aa17.96■□□□□ 0.47
LITAF-210ENST00000571976 CCSER1Q9C0I3 900 aa17.96■□□□□ 0.47
LITAF-210ENST00000571976 TSPYL2Q9H2G4 693 aaPredicted RBP17.96■□□□□ 0.47
LITAF-210ENST00000571976 IFT122Q9HBG6 1241 aa17.96■□□□□ 0.47
LITAF-210ENST00000571976 DAXXQ9UER7 740 aaPredicted RBP17.96■□□□□ 0.47
LITAF-210ENST00000571976 ZDHHC9Q9Y397 364 aa17.96■□□□□ 0.47
LITAF-210ENST00000571976 DENND3A2RUS2 1198 aa17.95■□□□□ 0.46
LITAF-210ENST00000571976 SPTLC2O15270 562 aa17.95■□□□□ 0.46
LITAF-210ENST00000571976 TLL1O43897 1013 aa17.95■□□□□ 0.46
LITAF-210ENST00000571976 PPP6R2O75170 966 aa17.95■□□□□ 0.46
LITAF-210ENST00000571976 SFPQP23246 707 aaKnown RBP eCLIP17.95■□□□□ 0.46
LITAF-210ENST00000571976 PHKA2P46019 1235 aa17.95■□□□□ 0.46
LITAF-210ENST00000571976 FOXD4L6Q3SYB3 417 aaPredicted RBP17.95■□□□□ 0.46
LITAF-210ENST00000571976 FAM102BQ5T8I3 360 aa17.95■□□□□ 0.46
LITAF-210ENST00000571976 FOXD4L3Q6VB84 417 aaPredicted RBP17.95■□□□□ 0.46
LITAF-210ENST00000571976 KCNK18Q7Z418 384 aa17.95■□□□□ 0.46
LITAF-210ENST00000571976 TMCO2Q7Z6W1 182 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms