RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 NME8Q8N427 588 aa7.79□□□□□ -1.16
SMG6-209ENST00000571442 TNPO1Q92973 898 aaKnown RBP7.79□□□□□ -1.16
SMG6-209ENST00000571442 FDXACB1Q9BRP7 624 aaPredicted RBP7.79□□□□□ -1.16
SMG6-209ENST00000571442 RUSC1Q9BVN2 902 aa7.79□□□□□ -1.16
SMG6-209ENST00000571442 IFIH1Q9BYX4 1025 aaKnown RBP7.79□□□□□ -1.16
SMG6-209ENST00000571442 BHMT2Q9H2M3 363 aa7.79□□□□□ -1.16
SMG6-209ENST00000571442 MINDY3Q9H8M7 445 aa7.79□□□□□ -1.16
SMG6-209ENST00000571442 IFT122Q9HBG6 1241 aa7.79□□□□□ -1.16
SMG6-209ENST00000571442 BLOC1S4Q9NUP1 217 aa7.79□□□□□ -1.16
SMG6-209ENST00000571442 SUCLA2Q9P2R7 463 aaPredicted RBP7.79□□□□□ -1.16
SMG6-209ENST00000571442 DBR1Q9UK59 544 aaKnown RBP7.79□□□□□ -1.16
SMG6-209ENST00000571442 PADI3Q9ULW8 664 aa7.79□□□□□ -1.16
SMG6-209ENST00000571442 YBX2Q9Y2T7 364 aaKnown RBP7.79□□□□□ -1.16
SMG6-209ENST00000571442 SRPRBQ9Y5M8 271 aaKnown RBP7.79□□□□□ -1.16
SMG6-209ENST00000571442 TTC3P53804 2025 aa7.79□□□□□ -1.16
SMG6-209ENST00000571442 CDH23Q9H251 3354 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 NPHP3-ACAD11A0A0J9YXS1 232 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 LCHNA4D1U4 455 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 DLL1O00548 723 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 DKC1O60832 514 aaKnown RBP eCLIP7.78□□□□□ -1.16
SMG6-209ENST00000571442 EYA4O95677 639 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 BMP15O95972 392 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 EDN1P05305 212 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 XRCC6P12956 609 aaKnown RBP eCLIP7.78□□□□□ -1.16
SMG6-209ENST00000571442 RFC5P40937 340 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 CRYBB1P53674 252 aaPredicted RBP7.78□□□□□ -1.16
SMG6-209ENST00000571442 SLC12A3P55017 1021 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 LAMTOR4Q0VGL1 99 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 MAPK7Q13164 816 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 CAPSQ13938 189 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 BECN1Q14457 450 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 NAALADL2Q58DX5 795 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 AXDND1Q5T1B0 1012 aaPredicted RBP7.78□□□□□ -1.16
SMG6-209ENST00000571442 IER5Q5VY09 327 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 KRT79Q5XKE5 535 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 HAUS3Q68CZ6 603 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 SHC4Q6S5L8 630 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 PADI6Q6TGC4 694 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 TSHZ1Q6ZSZ6 1077 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 OTUD6AQ7L8S5 288 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 RSPH3Q86UC2 560 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 RHPN2Q8IUC4 686 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 DAW1Q8N136 415 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 ERMNQ8TAM6 284 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 PRPF31Q8WWY3 499 aaKnown RBP7.78□□□□□ -1.16
SMG6-209ENST00000571442 SYMPKQ92797 1274 aaKnown RBP7.78□□□□□ -1.16
SMG6-209ENST00000571442 NLRP4Q96MN2 994 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 NACC1Q96RE7 527 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 MAP7D2Q96T17 732 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 MTRQ99707 1265 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 PBX4Q9BYU1 374 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 POLR3FQ9H1D9 316 aaPredicted RBP7.78□□□□□ -1.16
SMG6-209ENST00000571442 ATP6V0A4Q9HBG4 840 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 TSHZ2Q9NRE2 1034 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 ST3GAL5Q9UNP4 418 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 COL4A3BPQ9Y5P4 624 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 MORC2Q9Y6X9 1032 aaPredicted RBP7.78□□□□□ -1.16
SMG6-209ENST00000571442 ADGRA3Q8IWK6 1321 aa7.78□□□□□ -1.16
SMG6-209ENST00000571442 MYO9BQ13459 2157 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 MYH11P35749 1972 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 ARHGEF35A5YM69 484 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 TTLL13PA6NNM8 815 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 M0QZ92 97 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 ENPP3O14638 875 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 SPTLC2O15270 562 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 RPS6KA5O75582 802 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 DGAT1O75907 488 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 PARNO95453 639 aaKnown RBP7.77□□□□□ -1.17
SMG6-209ENST00000571442 YEATS4O95619 227 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 SRGAP2CP0DJJ0 459 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 DARSP14868 501 aaKnown RBP7.77□□□□□ -1.17
SMG6-209ENST00000571442 CYP11B2P19099 503 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 PLCG1P19174 1290 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 MUTP22033 750 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 EIF4BP23588 611 aaKnown RBP7.77□□□□□ -1.17
SMG6-209ENST00000571442 LONP1P36776 959 aaKnown RBP7.77□□□□□ -1.17
SMG6-209ENST00000571442 GATMP50440 423 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 CACNB1Q02641 598 aaPredicted RBP7.77□□□□□ -1.17
SMG6-209ENST00000571442 NFX1Q12986 1120 aaKnown RBP7.77□□□□□ -1.17
SMG6-209ENST00000571442 PAK2Q13177 524 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 MCM6Q14566 821 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 DSC3Q14574 896 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 STK38Q15208 465 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 ARSHQ5FYA8 562 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 RINT1Q6NUQ1 792 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 FAM117BQ6P1L5 589 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 C1orf186Q6ZWK4 172 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 CRIPAKQ8N1N5 446 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 NLRP7Q8WX94 980 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 SLC7A3Q8WY07 619 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 SEPT8Q92599 483 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 AK8Q96MA6 479 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 ZNF396Q96N95 335 aaPredicted RBP7.77□□□□□ -1.17
SMG6-209ENST00000571442 KIFC3Q9BVG8 833 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 PANK2Q9BZ23 570 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 CCSER1Q9C0I3 900 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 TTYH1Q9H313 450 aaPredicted RBP7.77□□□□□ -1.17
SMG6-209ENST00000571442 GDPD2Q9HCC8 539 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 MTMR10Q9NXD2 777 aa7.77□□□□□ -1.17
SMG6-209ENST00000571442 RCOR1Q9UKL0 485 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms