RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 ITIH3Q06033 890 aa21.5■■□□□ 1.03
SCARF1-204ENST00000570902 SMC1AQ14683 1233 aaKnown RBP21.5■■□□□ 1.03
SCARF1-204ENST00000570902 BMS1Q14692 1282 aaKnown RBP21.5■■□□□ 1.03
SCARF1-204ENST00000570902 EFCAB12Q6NXP0 572 aa21.5■■□□□ 1.03
SCARF1-204ENST00000570902 DHX32Q7L7V1 743 aaKnown RBP21.5■■□□□ 1.03
SCARF1-204ENST00000570902 TRMT1LQ7Z2T5 733 aaKnown RBP21.5■■□□□ 1.03
SCARF1-204ENST00000570902 ECHDC2Q86YB7 292 aa21.5■■□□□ 1.03
SCARF1-204ENST00000570902 UBALD2Q8IYN6 164 aa21.5■■□□□ 1.03
SCARF1-204ENST00000570902 ATOH1Q92858 354 aaPredicted RBP21.5■■□□□ 1.03
SCARF1-204ENST00000570902 TSHZ2Q9NRE2 1034 aa21.5■■□□□ 1.03
SCARF1-204ENST00000570902 RNF19AQ9NV58 838 aa21.5■■□□□ 1.03
SCARF1-204ENST00000570902 GABBR1Q9UBS5 961 aa21.5■■□□□ 1.03
SCARF1-204ENST00000570902 SP100P23497 879 aaPredicted RBP21.49■■□□□ 1.03
SCARF1-204ENST00000570902 EXOSC10Q01780 885 aaKnown RBP21.49■■□□□ 1.03
SCARF1-204ENST00000570902 MTMR3Q13615 1198 aa21.49■■□□□ 1.03
SCARF1-204ENST00000570902 PFKFB3Q16875 520 aaPredicted RBP21.49■■□□□ 1.03
SCARF1-204ENST00000570902 MRPL43Q8N983 215 aaKnown RBP21.49■■□□□ 1.03
SCARF1-204ENST00000570902 KREMEN2Q8NCW0 462 aa21.49■■□□□ 1.03
SCARF1-204ENST00000570902 CCDC12Q8WUD4 166 aaPredicted RBP21.49■■□□□ 1.03
SCARF1-204ENST00000570902 SNX27Q96L92 541 aa21.49■■□□□ 1.03
SCARF1-204ENST00000570902 ADAMTS10Q9H324 1103 aa21.49■■□□□ 1.03
SCARF1-204ENST00000570902 SAMM50Q9Y512 469 aa21.49■■□□□ 1.03
SCARF1-204ENST00000570902 KLF18A0A0U1RQI7 1052 aa21.48■■□□□ 1.03
SCARF1-204ENST00000570902 ESYT2A0FGR8 921 aa21.48■■□□□ 1.03
SCARF1-204ENST00000570902 EOMESO95936 686 aa21.48■■□□□ 1.03
SCARF1-204ENST00000570902 PBX3P40426 434 aa21.48■■□□□ 1.03
SCARF1-204ENST00000570902 REXO1Q8N1G1 1221 aaKnown RBP21.48■■□□□ 1.03
SCARF1-204ENST00000570902 LINC01465Q8N7H1 131 aa21.48■■□□□ 1.03
SCARF1-204ENST00000570902 RNF169Q8NCN4 708 aa21.48■■□□□ 1.03
SCARF1-204ENST00000570902 TCEANC2Q96MN5 208 aa21.48■■□□□ 1.03
SCARF1-204ENST00000570902 MRPL9Q9BYD2 267 aaKnown RBP21.48■■□□□ 1.03
SCARF1-204ENST00000570902 ZMYND12Q9H0C1 365 aa21.48■■□□□ 1.03
SCARF1-204ENST00000570902 ADAM7Q9H2U9 754 aa21.48■■□□□ 1.03
SCARF1-204ENST00000570902 C6orf50Q9HD87 102 aa21.48■■□□□ 1.03
SCARF1-204ENST00000570902 FAM86C1Q9NVL1 165 aa21.48■■□□□ 1.03
SCARF1-204ENST00000570902 SORCS3Q9UPU3 1222 aa21.48■■□□□ 1.03
SCARF1-204ENST00000570902 HCFC2Q9Y5Z7 792 aa21.48■■□□□ 1.03
SCARF1-204ENST00000570902 MYH9P35579 1960 aaKnown RBP21.48■■□□□ 1.03
SCARF1-204ENST00000570902 CCDC196A0A1B0GTZ2 297 aa21.47■■□□□ 1.03
SCARF1-204ENST00000570902 C2orf71A6NGG8 1288 aa21.47■■□□□ 1.03
SCARF1-204ENST00000570902 WDR64B1ANS9 1081 aa21.47■■□□□ 1.03
SCARF1-204ENST00000570902 PRR16Q569H4 304 aa21.47■■□□□ 1.03
SCARF1-204ENST00000570902 SLC39A11Q8N1S5 342 aa21.47■■□□□ 1.03
SCARF1-204ENST00000570902 NRBP2Q9NSY0 501 aa21.47■■□□□ 1.03
SCARF1-204ENST00000570902 FAM217BQ9NTX9 383 aaPredicted RBP21.47■■□□□ 1.03
SCARF1-204ENST00000570902 DACT1Q9NYF0 836 aa21.47■■□□□ 1.03
SCARF1-204ENST00000570902 A0A0U1RQF3 1178 aa21.46■■□□□ 1.03
SCARF1-204ENST00000570902 OATP04181 439 aa21.46■■□□□ 1.03
SCARF1-204ENST00000570902 GNA11P29992 359 aa21.46■■□□□ 1.03
SCARF1-204ENST00000570902 CDC27P30260 824 aa21.46■■□□□ 1.03
SCARF1-204ENST00000570902 MTHFRP42898 656 aa21.46■■□□□ 1.03
SCARF1-204ENST00000570902 ALDH7A1P49419 539 aaKnown RBP21.46■■□□□ 1.03
SCARF1-204ENST00000570902 CLLU1OSQ5K130 101 aa21.46■■□□□ 1.03
SCARF1-204ENST00000570902 LRRC71Q8N4P6 559 aa21.46■■□□□ 1.03
SCARF1-204ENST00000570902 RSPH1Q8WYR4 309 aa21.46■■□□□ 1.03
SCARF1-204ENST00000570902 SCLT1Q96NL6 688 aa21.46■■□□□ 1.03
SCARF1-204ENST00000570902 POMKQ9H5K3 350 aa21.46■■□□□ 1.03
SCARF1-204ENST00000570902 CARNS1A5YM72 827 aa21.45■■□□□ 1.02
SCARF1-204ENST00000570902 GALR2O43603 387 aaPredicted RBP21.45■■□□□ 1.02
SCARF1-204ENST00000570902 CLASP2O75122 1294 aaKnown RBP21.45■■□□□ 1.02
SCARF1-204ENST00000570902 DARSP14868 501 aaKnown RBP21.45■■□□□ 1.02
SCARF1-204ENST00000570902 CIITAP33076 1130 aa21.45■■□□□ 1.02
SCARF1-204ENST00000570902 GPC3P51654 580 aa21.45■■□□□ 1.02
SCARF1-204ENST00000570902 KRT32Q14532 448 aa21.45■■□□□ 1.02
SCARF1-204ENST00000570902 TSGA10IPQ3SY00 556 aa21.45■■□□□ 1.02
SCARF1-204ENST00000570902 NAP1L2Q9ULW6 460 aaPredicted RBP21.45■■□□□ 1.02
SCARF1-204ENST00000570902 C2CD4DB7Z1M9 353 aa21.44■■□□□ 1.02
SCARF1-204ENST00000570902 PDGFBP01127 241 aaPredicted RBP21.44■■□□□ 1.02
SCARF1-204ENST00000570902 HMGB1P09429 215 aaKnown RBP21.44■■□□□ 1.02
SCARF1-204ENST00000570902 CA8P35219 290 aa21.44■■□□□ 1.02
SCARF1-204ENST00000570902 METAP2P50579 478 aaKnown RBP eCLIP21.44■■□□□ 1.02
SCARF1-204ENST00000570902 FGD1P98174 961 aa21.44■■□□□ 1.02
SCARF1-204ENST00000570902 ZNF598Q86UK7 904 aaKnown RBP21.44■■□□□ 1.02
SCARF1-204ENST00000570902 TMEM87AQ8NBN3 555 aa21.44■■□□□ 1.02
SCARF1-204ENST00000570902 BICD2Q8TD16 824 aa21.44■■□□□ 1.02
SCARF1-204ENST00000570902 HELQQ8TDG4 1101 aa21.44■■□□□ 1.02
SCARF1-204ENST00000570902 NLRP7Q8WX94 980 aa21.44■■□□□ 1.02
SCARF1-204ENST00000570902 TMEM169Q96HH4 297 aa21.44■■□□□ 1.02
SCARF1-204ENST00000570902 DISC1Q9NRI5 854 aa21.44■■□□□ 1.02
SCARF1-204ENST00000570902 DZANK1Q9NVP4 752 aa21.44■■□□□ 1.02
SCARF1-204ENST00000570902 H0Y858 1186 aa21.43■■□□□ 1.02
SCARF1-204ENST00000570902 CXCL14O95715 111 aa21.43■■□□□ 1.02
SCARF1-204ENST00000570902 ADD1P35611 737 aaKnown RBP21.43■■□□□ 1.02
SCARF1-204ENST00000570902 BCAR1P56945 870 aa21.43■■□□□ 1.02
SCARF1-204ENST00000570902 CDC42EP1Q00587 391 aa21.43■■□□□ 1.02
SCARF1-204ENST00000570902 PRKCEQ02156 737 aa21.43■■□□□ 1.02
SCARF1-204ENST00000570902 GIT2Q14161 759 aa21.43■■□□□ 1.02
SCARF1-204ENST00000570902 CHST12Q9NRB3 414 aa21.43■■□□□ 1.02
SCARF1-204ENST00000570902 CDH22Q9UJ99 828 aa21.43■■□□□ 1.02
SCARF1-204ENST00000570902 PROB1E7EW31 1015 aa21.42■■□□□ 1.02
SCARF1-204ENST00000570902 ZNF862O60290 1169 aa21.42■■□□□ 1.02
SCARF1-204ENST00000570902 BRD1O95696 1058 aa21.42■■□□□ 1.02
SCARF1-204ENST00000570902 SFNP31947 248 aa21.42■■□□□ 1.02
SCARF1-204ENST00000570902 TBC1D8BQ0IIM8 1120 aa21.42■■□□□ 1.02
SCARF1-204ENST00000570902 ADCK5Q3MIX3 580 aa21.42■■□□□ 1.02
SCARF1-204ENST00000570902 ZDHHC14Q8IZN3 488 aa21.42■■□□□ 1.02
SCARF1-204ENST00000570902 TDRD5Q8NAT2 981 aaKnown RBP21.42■■□□□ 1.02
SCARF1-204ENST00000570902 LENG9Q96B70 501 aa21.42■■□□□ 1.02
SCARF1-204ENST00000570902 ZNF668Q96K58 619 aaPredicted RBP21.42■■□□□ 1.02
SCARF1-204ENST00000570902 JAK3P52333 1124 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms