RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 GPR182O15218 404 aa13.92□□□□□ -0.18
CTDNEP1-205ENST00000570828 ZNF862O60290 1169 aa13.92□□□□□ -0.18
CTDNEP1-205ENST00000570828 DGKIO75912 1065 aa13.92□□□□□ -0.18
CTDNEP1-205ENST00000570828 RB1P06400 928 aa13.92□□□□□ -0.18
CTDNEP1-205ENST00000570828 GCFC2P16383 781 aaKnown RBP13.92□□□□□ -0.18
CTDNEP1-205ENST00000570828 CRYBB1P53674 252 aaPredicted RBP13.92□□□□□ -0.18
CTDNEP1-205ENST00000570828 NEK8Q86SG6 692 aa13.92□□□□□ -0.18
CTDNEP1-205ENST00000570828 CMTR2Q8IYT2 770 aaKnown RBP13.92□□□□□ -0.18
CTDNEP1-205ENST00000570828 LRRC71Q8N4P6 559 aa13.92□□□□□ -0.18
CTDNEP1-205ENST00000570828 ETNPPLQ8TBG4 499 aa13.92□□□□□ -0.18
CTDNEP1-205ENST00000570828 TMEM40Q8WWA1 233 aa13.92□□□□□ -0.18
CTDNEP1-205ENST00000570828 CLP1Q92989 425 aaKnown RBP13.92□□□□□ -0.18
CTDNEP1-205ENST00000570828 GTF3C6Q969F1 213 aa13.92□□□□□ -0.18
CTDNEP1-205ENST00000570828 ZNF689Q96CS4 500 aaPredicted RBP13.92□□□□□ -0.18
CTDNEP1-205ENST00000570828 MBOAT7Q96N66 472 aa13.92□□□□□ -0.18
CTDNEP1-205ENST00000570828 SCLT1Q96NL6 688 aa13.92□□□□□ -0.18
CTDNEP1-205ENST00000570828 TMX1Q9H3N1 280 aa13.92□□□□□ -0.18
CTDNEP1-205ENST00000570828 BRMS1Q9HCU9 246 aa13.92□□□□□ -0.18
CTDNEP1-205ENST00000570828 ERVK-5Q9HDB9 667 aa13.92□□□□□ -0.18
CTDNEP1-205ENST00000570828 SEPT9Q9UHD8 586 aaPredicted RBP13.92□□□□□ -0.18
CTDNEP1-205ENST00000570828 ST3GAL5Q9UNP4 418 aa13.92□□□□□ -0.18
CTDNEP1-205ENST00000570828 C5orf67F2Z3F1 127 aa13.91□□□□□ -0.18
CTDNEP1-205ENST00000570828 SLC37A4O43826 429 aa13.91□□□□□ -0.18
CTDNEP1-205ENST00000570828 CTDNEP1O95476 244 aa13.91□□□□□ -0.18
CTDNEP1-205ENST00000570828 BMP1P13497 986 aa13.91□□□□□ -0.18
CTDNEP1-205ENST00000570828 BMPR1AP36894 532 aa13.91□□□□□ -0.18
CTDNEP1-205ENST00000570828 SARSP49591 514 aaKnown RBP13.91□□□□□ -0.18
CTDNEP1-205ENST00000570828 TBC1D8BQ0IIM8 1120 aa13.91□□□□□ -0.18
CTDNEP1-205ENST00000570828 PAN2Q504Q3 1202 aaKnown RBP13.91□□□□□ -0.18
CTDNEP1-205ENST00000570828 EFCAB12Q6NXP0 572 aa13.91□□□□□ -0.18
CTDNEP1-205ENST00000570828 PIK3AP1Q6ZUJ8 805 aa13.91□□□□□ -0.18
CTDNEP1-205ENST00000570828 RTN4RL1Q86UN2 441 aaPredicted RBP13.91□□□□□ -0.18
CTDNEP1-205ENST00000570828 NECAB1Q8N987 351 aa13.91□□□□□ -0.18
CTDNEP1-205ENST00000570828 BANK1Q8NDB2 785 aa13.91□□□□□ -0.18
CTDNEP1-205ENST00000570828 NAP1L4Q99733 375 aaKnown RBP13.91□□□□□ -0.18
CTDNEP1-205ENST00000570828 ADAM2Q99965 735 aa13.91□□□□□ -0.18
CTDNEP1-205ENST00000570828 UBE2ZQ9H832 354 aaPredicted RBP13.91□□□□□ -0.18
CTDNEP1-205ENST00000570828 CDHR5Q9HBB8 845 aa13.91□□□□□ -0.18
CTDNEP1-205ENST00000570828 C1orf112Q9NSG2 853 aa13.91□□□□□ -0.18
CTDNEP1-205ENST00000570828 PCDHB7Q9Y5E2 793 aa13.91□□□□□ -0.18
CTDNEP1-205ENST00000570828 BDP1A6H8Y1 2624 aa13.9□□□□□ -0.18
CTDNEP1-205ENST00000570828 MGEA5O60502 916 aa13.9□□□□□ -0.18
CTDNEP1-205ENST00000570828 DTNBO60941 627 aa13.9□□□□□ -0.18
CTDNEP1-205ENST00000570828 GPR32O75388 356 aa13.9□□□□□ -0.18
CTDNEP1-205ENST00000570828 LINC00271P0C7V0 271 aa13.9□□□□□ -0.18
CTDNEP1-205ENST00000570828 KRT2P35908 639 aa13.9□□□□□ -0.18
CTDNEP1-205ENST00000570828 NEK4P51957 841 aa13.9□□□□□ -0.18
CTDNEP1-205ENST00000570828 NLRP11P59045 1033 aaKnown RBP13.9□□□□□ -0.18
CTDNEP1-205ENST00000570828 ME3Q16798 604 aa13.9□□□□□ -0.18
CTDNEP1-205ENST00000570828 XKR3Q5GH77 459 aa13.9□□□□□ -0.18
CTDNEP1-205ENST00000570828 PPP4R3AQ6IN85 833 aa13.9□□□□□ -0.18
CTDNEP1-205ENST00000570828 FAM228AQ86W67 206 aa13.9□□□□□ -0.18
CTDNEP1-205ENST00000570828 CRIPAKQ8N1N5 446 aa13.9□□□□□ -0.18
CTDNEP1-205ENST00000570828 LINC01465Q8N7H1 131 aa13.9□□□□□ -0.18
CTDNEP1-205ENST00000570828 OXER1Q8TDS5 423 aa13.9□□□□□ -0.18
CTDNEP1-205ENST00000570828 FAM20AQ96MK3 541 aa13.9□□□□□ -0.18
CTDNEP1-205ENST00000570828 PLVAPQ9BX97 442 aa13.9□□□□□ -0.18
CTDNEP1-205ENST00000570828 LMAN2LQ9H0V9 348 aa13.9□□□□□ -0.18
CTDNEP1-205ENST00000570828 NSUN3Q9H649 340 aaKnown RBP13.9□□□□□ -0.18
CTDNEP1-205ENST00000570828 GJB4Q9NTQ9 266 aa13.9□□□□□ -0.18
CTDNEP1-205ENST00000570828 MRPL42Q9Y6G3 142 aaKnown RBP13.9□□□□□ -0.18
CTDNEP1-205ENST00000570828 MARCH6O60337 910 aa13.89□□□□□ -0.19
CTDNEP1-205ENST00000570828 CCNT1O60563 726 aaKnown RBP13.89□□□□□ -0.19
CTDNEP1-205ENST00000570828 LARGE1O95461 756 aa13.89□□□□□ -0.19
CTDNEP1-205ENST00000570828 KCNA5P22460 613 aa13.89□□□□□ -0.19
CTDNEP1-205ENST00000570828 MTERF2Q49AM1 385 aa13.89□□□□□ -0.19
CTDNEP1-205ENST00000570828 B3GNT9Q6UX72 402 aa13.89□□□□□ -0.19
CTDNEP1-205ENST00000570828 SLC24A5Q71RS6 500 aa13.89□□□□□ -0.19
CTDNEP1-205ENST00000570828 NECAB3Q96P71 396 aaPredicted RBP13.89□□□□□ -0.19
CTDNEP1-205ENST00000570828 KCNMB3Q9NPA1 279 aa13.89□□□□□ -0.19
CTDNEP1-205ENST00000570828 RGS18Q9NS28 235 aa13.89□□□□□ -0.19
CTDNEP1-205ENST00000570828 TBX3O15119 743 aa13.88□□□□□ -0.19
CTDNEP1-205ENST00000570828 GRM6O15303 877 aa13.88□□□□□ -0.19
CTDNEP1-205ENST00000570828 CSPG5O95196 566 aa13.88□□□□□ -0.19
CTDNEP1-205ENST00000570828 EIF4BP23588 611 aaKnown RBP13.88□□□□□ -0.19
CTDNEP1-205ENST00000570828 GATMP50440 423 aa13.88□□□□□ -0.19
CTDNEP1-205ENST00000570828 DNM2P50570 870 aa13.88□□□□□ -0.19
CTDNEP1-205ENST00000570828 GPC3P51654 580 aa13.88□□□□□ -0.19
CTDNEP1-205ENST00000570828 PSMC5P62195 406 aa13.88□□□□□ -0.19
CTDNEP1-205ENST00000570828 PPP2R5CQ13362 524 aa13.88□□□□□ -0.19
CTDNEP1-205ENST00000570828 TRIM29Q14134 588 aa13.88□□□□□ -0.19
CTDNEP1-205ENST00000570828 TARBP2Q15633 366 aaKnown RBP13.88□□□□□ -0.19
CTDNEP1-205ENST00000570828 TCEAL5Q5H9L2 206 aa13.88□□□□□ -0.19
CTDNEP1-205ENST00000570828 NSUN7Q8NE18 718 aaKnown RBP13.88□□□□□ -0.19
CTDNEP1-205ENST00000570828 NLRP7Q8WX94 980 aa13.88□□□□□ -0.19
CTDNEP1-205ENST00000570828 NIFKQ9BYG3 293 aaKnown RBP13.88□□□□□ -0.19
CTDNEP1-205ENST00000570828 ADAMTS10Q9H324 1103 aa13.88□□□□□ -0.19
CTDNEP1-205ENST00000570828 VAV3Q9UKW4 847 aa13.88□□□□□ -0.19
CTDNEP1-205ENST00000570828 TTC3P53804 2025 aa13.87□□□□□ -0.19
CTDNEP1-205ENST00000570828 TMEM150BA6NC51 233 aa13.87□□□□□ -0.19
CTDNEP1-205ENST00000570828 TBKBP1A7MCY6 615 aa13.87□□□□□ -0.19
CTDNEP1-205ENST00000570828 DDX11L8A8MPP1 907 aa13.87□□□□□ -0.19
CTDNEP1-205ENST00000570828 C9IYK1 514 aa13.87□□□□□ -0.19
CTDNEP1-205ENST00000570828 DKC1O60832 514 aaKnown RBP eCLIP13.87□□□□□ -0.19
CTDNEP1-205ENST00000570828 MMP1P03956 469 aa13.87□□□□□ -0.19
CTDNEP1-205ENST00000570828 FDPSP14324 419 aaKnown RBP13.87□□□□□ -0.19
CTDNEP1-205ENST00000570828 ZSCAN20P17040 1043 aaPredicted RBP13.87□□□□□ -0.19
CTDNEP1-205ENST00000570828 QARSP47897 775 aaKnown RBP13.87□□□□□ -0.19
CTDNEP1-205ENST00000570828 NR5A1Q13285 461 aa13.87□□□□□ -0.19
CTDNEP1-205ENST00000570828 NAALADL2Q58DX5 795 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms