RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 DPY19L2P1Q6NXN4 242 aa16.68■□□□□ 0.26
SMG6-207ENST00000570756 FBXO33Q7Z6M2 555 aa16.68■□□□□ 0.26
SMG6-207ENST00000570756 DNAAF5Q86Y56 855 aa16.68■□□□□ 0.26
SMG6-207ENST00000570756 RBM46Q8TBY0 533 aaKnown RBP16.68■□□□□ 0.26
SMG6-207ENST00000570756 FBXO25Q8TCJ0 367 aa16.68■□□□□ 0.26
SMG6-207ENST00000570756 U2AF1L4Q8WU68 220 aaKnown RBP16.68■□□□□ 0.26
SMG6-207ENST00000570756 RFFLQ8WZ73 363 aa16.68■□□□□ 0.26
SMG6-207ENST00000570756 CCDC113Q9H0I3 377 aa16.68■□□□□ 0.26
SMG6-207ENST00000570756 BSDC1Q9NW68 430 aaPredicted RBP16.68■□□□□ 0.26
SMG6-207ENST00000570756 BCL9O00512 1426 aa16.68■□□□□ 0.26
SMG6-207ENST00000570756 NCANO14594 1321 aa16.68■□□□□ 0.26
SMG6-207ENST00000570756 RASGRF2O14827 1237 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 HSPA6P17066 643 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 ZDHHC24Q6UX98 284 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 FGFBP2Q9BYJ0 223 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 MTFR1LQ9H019 292 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 CPVLQ9H3G5 476 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 ZNF287Q9HBT7 754 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 SNX24Q9Y343 169 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 NR2E1Q9Y466 385 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 RPTORQ8N122 1335 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 DDX3XO00571 662 aaKnown RBP eCLIP16.67■□□□□ 0.26
SMG6-207ENST00000570756 PODXLO00592 558 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 DDX3YO15523 660 aaKnown RBP16.67■□□□□ 0.26
SMG6-207ENST00000570756 PRDX5P30044 214 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 ADCY7P51828 1080 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 GALCP54803 685 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 MKRN4PQ13434 485 aaPredicted RBP16.67■□□□□ 0.26
SMG6-207ENST00000570756 KCTD19Q17RG1 926 aaPredicted RBP16.67■□□□□ 0.26
SMG6-207ENST00000570756 TNFAIP8L3Q5GJ75 292 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 ANKRD20A2Q5SQ80 823 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 ANKRD20A1Q5TYW2 823 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 ANKRD20A3Q5VUR7 823 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 MFSD5Q6N075 450 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 CHADLQ6NUI6 762 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 EGFL6Q8IUX8 553 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 TEX9Q8N6V9 391 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 GLG1Q92896 1179 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 RUNDC3BQ96NL0 473 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 TRIM7Q9C029 511 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 ARL2BPQ9Y2Y0 163 aa16.67■□□□□ 0.26
SMG6-207ENST00000570756 WFS1O76024 890 aa16.66■□□□□ 0.26
SMG6-207ENST00000570756 KRT16P08779 473 aa16.66■□□□□ 0.26
SMG6-207ENST00000570756 LMNB1P20700 586 aa16.66■□□□□ 0.26
SMG6-207ENST00000570756 JAM2P57087 298 aa16.66■□□□□ 0.26
SMG6-207ENST00000570756 DZIP1Q86YF9 867 aaKnown RBP16.66■□□□□ 0.26
SMG6-207ENST00000570756 TBC1D16Q8TBP0 767 aa16.66■□□□□ 0.26
SMG6-207ENST00000570756 EPS8L3Q8TE67 593 aaKnown RBP16.66■□□□□ 0.26
SMG6-207ENST00000570756 PRCCQ92733 491 aaPredicted RBP16.66■□□□□ 0.26
SMG6-207ENST00000570756 ROPN1BQ9BZX4 212 aaPredicted RBP16.66■□□□□ 0.26
SMG6-207ENST00000570756 TAOK3Q9H2K8 898 aa16.66■□□□□ 0.26
SMG6-207ENST00000570756 ROPN1Q9HAT0 212 aaPredicted RBP16.66■□□□□ 0.26
SMG6-207ENST00000570756 RXFP1Q9HBX9 757 aa16.66■□□□□ 0.26
SMG6-207ENST00000570756 NIP7Q9Y221 180 aaKnown RBP eCLIP16.66■□□□□ 0.26
SMG6-207ENST00000570756 MARCH6O60337 910 aa16.66■□□□□ 0.26
SMG6-207ENST00000570756 TMEM253P0C7T8 217 aa16.66■□□□□ 0.26
SMG6-207ENST00000570756 KRT13P13646 458 aa16.66■□□□□ 0.26
SMG6-207ENST00000570756 CHRNA3P32297 505 aa16.66■□□□□ 0.26
SMG6-207ENST00000570756 BIRC2Q13490 618 aa16.66■□□□□ 0.26
SMG6-207ENST00000570756 ECM1Q16610 540 aa16.66■□□□□ 0.26
SMG6-207ENST00000570756 HYIQ5T013 277 aa16.66■□□□□ 0.26
SMG6-207ENST00000570756 DCAF12L1Q5VU92 463 aa16.66■□□□□ 0.26
SMG6-207ENST00000570756 ERICH1Q86X53 443 aa16.66■□□□□ 0.26
SMG6-207ENST00000570756 SLC35G2Q8TBE7 412 aa16.66■□□□□ 0.26
SMG6-207ENST00000570756 CTNNBL1Q8WYA6 563 aaPredicted RBP16.66■□□□□ 0.26
SMG6-207ENST00000570756 RAB3IPQ96QF0 476 aaPredicted RBP16.66■□□□□ 0.26
SMG6-207ENST00000570756 PIGSQ96S52 555 aa16.66■□□□□ 0.26
SMG6-207ENST00000570756 SEMA4AQ9H3S1 761 aa16.66■□□□□ 0.26
SMG6-207ENST00000570756 VAT1LQ9HCJ6 419 aa16.66■□□□□ 0.26
SMG6-207ENST00000570756 STK38LQ9Y2H1 464 aa16.66■□□□□ 0.26
SMG6-207ENST00000570756 WTIPA6NIX2 430 aaPredicted RBP16.65■□□□□ 0.26
SMG6-207ENST00000570756 ATP5DP30049 168 aa16.65■□□□□ 0.26
SMG6-207ENST00000570756 SKIV2L2P42285 1042 aaKnown RBP16.65■□□□□ 0.26
SMG6-207ENST00000570756 PLS1Q14651 629 aa16.65■□□□□ 0.26
SMG6-207ENST00000570756 SPTY2D1Q68D10 685 aaPredicted RBP16.65■□□□□ 0.26
SMG6-207ENST00000570756 FGFR1OP2Q9NVK5 253 aa16.65■□□□□ 0.26
SMG6-207ENST00000570756 PPP1R9AQ9ULJ8 1098 aa16.65■□□□□ 0.26
SMG6-207ENST00000570756 MINPP1Q9UNW1 487 aa16.65■□□□□ 0.26
SMG6-207ENST00000570756 SYNGAP1Q96PV0 1343 aa16.65■□□□□ 0.26
SMG6-207ENST00000570756 TCP11X1B4DZS4 312 aa16.65■□□□□ 0.26
SMG6-207ENST00000570756 RIPK2O43353 540 aa16.65■□□□□ 0.26
SMG6-207ENST00000570756 PHF2O75151 1096 aa16.65■□□□□ 0.26
SMG6-207ENST00000570756 GJB6O95452 261 aa16.65■□□□□ 0.26
SMG6-207ENST00000570756 KRT18P05783 430 aaKnown RBP16.65■□□□□ 0.26
SMG6-207ENST00000570756 PLA2G4BP0C869 781 aa16.65■□□□□ 0.26
SMG6-207ENST00000570756 BRD2P25440 801 aaKnown RBP16.65■□□□□ 0.26
SMG6-207ENST00000570756 STAT1P42224 750 aa16.65■□□□□ 0.26
SMG6-207ENST00000570756 AUHQ13825 339 aaKnown RBP16.65■□□□□ 0.26
SMG6-207ENST00000570756 ASRGL1Q7L266 308 aa16.65■□□□□ 0.26
SMG6-207ENST00000570756 KRT27Q7Z3Y8 459 aa16.65■□□□□ 0.26
SMG6-207ENST00000570756 SPATA21Q7Z572 469 aa16.65■□□□□ 0.26
SMG6-207ENST00000570756 ADAT2Q7Z6V5 191 aaKnown RBP16.65■□□□□ 0.26
SMG6-207ENST00000570756 GPBP1Q86WP2 473 aa16.65■□□□□ 0.26
SMG6-207ENST00000570756 MXD3Q9BW11 206 aa16.65■□□□□ 0.26
SMG6-207ENST00000570756 METTL14Q9HCE5 456 aaKnown RBP16.65■□□□□ 0.26
SMG6-207ENST00000570756 OSGEPQ9NPF4 335 aa16.65■□□□□ 0.26
SMG6-207ENST00000570756 GRHL1Q9NZI5 618 aa16.65■□□□□ 0.26
SMG6-207ENST00000570756 TRAF3IP3Q9Y228 551 aa16.65■□□□□ 0.26
SMG6-207ENST00000570756 RARGP13631 454 aa16.64■□□□□ 0.25
SMG6-207ENST00000570756 SLCO1A2P46721 670 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms