RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 MYO1BO43795 1136 aa8.44□□□□□ -1.06
CNOT1-222ENST00000570139 IGKV5-2P06315 115 aa8.44□□□□□ -1.06
CNOT1-222ENST00000570139 IFNGR1P15260 489 aa8.44□□□□□ -1.06
CNOT1-222ENST00000570139 CRKLP46109 303 aaKnown RBP8.44□□□□□ -1.06
CNOT1-222ENST00000570139 DNM2P50570 870 aa8.44□□□□□ -1.06
CNOT1-222ENST00000570139 ATP8B2P98198 1209 aa8.44□□□□□ -1.06
CNOT1-222ENST00000570139 MORC3Q14149 939 aa8.44□□□□□ -1.06
CNOT1-222ENST00000570139 GBX1Q14549 363 aa8.44□□□□□ -1.06
CNOT1-222ENST00000570139 CDPF1Q6NVV7 123 aa8.44□□□□□ -1.06
CNOT1-222ENST00000570139 PGM2L1Q6PCE3 622 aa8.44□□□□□ -1.06
CNOT1-222ENST00000570139 C16orf59Q7L2K0 433 aa8.44□□□□□ -1.06
CNOT1-222ENST00000570139 OVCH1Q7RTY7 1134 aa8.44□□□□□ -1.06
CNOT1-222ENST00000570139 CCDC103Q8IW40 242 aa8.44□□□□□ -1.06
CNOT1-222ENST00000570139 AMOTL1Q8IY63 956 aa8.44□□□□□ -1.06
CNOT1-222ENST00000570139 PJA1Q8NG27 643 aa8.44□□□□□ -1.06
CNOT1-222ENST00000570139 PIWIL2Q8TC59 973 aaKnown RBP8.44□□□□□ -1.06
CNOT1-222ENST00000570139 SSH3Q8TE77 659 aa8.44□□□□□ -1.06
CNOT1-222ENST00000570139 FBLIM1Q8WUP2 373 aa8.44□□□□□ -1.06
CNOT1-222ENST00000570139 TTC17Q96AE7 1141 aa8.44□□□□□ -1.06
CNOT1-222ENST00000570139 FCRL3Q96P31 734 aaPredicted RBP8.44□□□□□ -1.06
CNOT1-222ENST00000570139 HDAC8Q9BY41 377 aa8.44□□□□□ -1.06
CNOT1-222ENST00000570139 PRDM16Q9HAZ2 1276 aa8.44□□□□□ -1.06
CNOT1-222ENST00000570139 C14orf119Q9NWQ9 140 aa8.44□□□□□ -1.06
CNOT1-222ENST00000570139 MKS1Q9NXB0 559 aa8.44□□□□□ -1.06
CNOT1-222ENST00000570139 CLEC1BQ9P126 229 aa8.44□□□□□ -1.06
CNOT1-222ENST00000570139 TMEFF2Q9UIK5 374 aaPredicted RBP8.44□□□□□ -1.06
CNOT1-222ENST00000570139 LRRFIP2Q9Y608 721 aaKnown RBP8.44□□□□□ -1.06
CNOT1-222ENST00000570139 KAT6BQ8WYB5 2073 aa8.44□□□□□ -1.06
CNOT1-222ENST00000570139 H7C1D1 291 aa8.43□□□□□ -1.06
CNOT1-222ENST00000570139 MSCO60682 206 aa8.43□□□□□ -1.06
CNOT1-222ENST00000570139 FOSP01100 380 aaPredicted RBP8.43□□□□□ -1.06
CNOT1-222ENST00000570139 LTFP02788 710 aa8.43□□□□□ -1.06
CNOT1-222ENST00000570139 PAMP19021 973 aa8.43□□□□□ -1.06
CNOT1-222ENST00000570139 EIF5P55010 431 aaKnown RBP8.43□□□□□ -1.06
CNOT1-222ENST00000570139 PRRT3Q5FWE3 981 aa8.43□□□□□ -1.06
CNOT1-222ENST00000570139 CHD1LQ86WJ1 897 aa8.43□□□□□ -1.06
CNOT1-222ENST00000570139 ERC1Q8IUD2 1116 aa8.43□□□□□ -1.06
CNOT1-222ENST00000570139 SIRT2Q8IXJ6 389 aa8.43□□□□□ -1.06
CNOT1-222ENST00000570139 IRF7Q92985 503 aa8.43□□□□□ -1.06
CNOT1-222ENST00000570139 HSPBAP1Q96EW2 488 aa8.43□□□□□ -1.06
CNOT1-222ENST00000570139 TRIM11Q96F44 468 aa8.43□□□□□ -1.06
CNOT1-222ENST00000570139 Q96M66 194 aa8.43□□□□□ -1.06
CNOT1-222ENST00000570139 MMP19Q99542 508 aa8.43□□□□□ -1.06
CNOT1-222ENST00000570139 PLVAPQ9BX97 442 aa8.43□□□□□ -1.06
CNOT1-222ENST00000570139 AKTIPQ9H8T0 292 aa8.43□□□□□ -1.06
CNOT1-222ENST00000570139 VTA1Q9NP79 307 aa8.43□□□□□ -1.06
CNOT1-222ENST00000570139 OXSMQ9NWU1 459 aa8.43□□□□□ -1.06
CNOT1-222ENST00000570139 MINPP1Q9UNW1 487 aa8.43□□□□□ -1.06
CNOT1-222ENST00000570139 ZBTB1Q9Y2K1 713 aa8.43□□□□□ -1.06
CNOT1-222ENST00000570139 TNS1Q9HBL0 1735 aaKnown RBP8.43□□□□□ -1.06
CNOT1-222ENST00000570139 TRIM75PA6NK02 468 aa8.42□□□□□ -1.06
CNOT1-222ENST00000570139 CELA2BP08218 269 aaPredicted RBP8.42□□□□□ -1.06
CNOT1-222ENST00000570139 GLB1P16278 677 aa8.42□□□□□ -1.06
CNOT1-222ENST00000570139 GRK2P25098 689 aa8.42□□□□□ -1.06
CNOT1-222ENST00000570139 GRK3P35626 688 aa8.42□□□□□ -1.06
CNOT1-222ENST00000570139 CDK5R2Q13319 367 aa8.42□□□□□ -1.06
CNOT1-222ENST00000570139 ITPK1Q13572 414 aa8.42□□□□□ -1.06
CNOT1-222ENST00000570139 PCBP2Q15366 365 aaKnown RBP eCLIP8.42□□□□□ -1.06
CNOT1-222ENST00000570139 CRY1Q16526 586 aa8.42□□□□□ -1.06
CNOT1-222ENST00000570139 UVSSAQ2YD98 709 aa8.42□□□□□ -1.06
CNOT1-222ENST00000570139 PARP10Q53GL7 1025 aa8.42□□□□□ -1.06
CNOT1-222ENST00000570139 BROXQ5VW32 411 aa8.42□□□□□ -1.06
CNOT1-222ENST00000570139 CLEC4GQ6UXB4 293 aa8.42□□□□□ -1.06
CNOT1-222ENST00000570139 Q6ZS46 218 aa8.42□□□□□ -1.06
CNOT1-222ENST00000570139 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.42□□□□□ -1.06
CNOT1-222ENST00000570139 TTLL7Q6ZT98 887 aa8.42□□□□□ -1.06
CNOT1-222ENST00000570139 C22orf34Q6ZV56 151 aa8.42□□□□□ -1.06
CNOT1-222ENST00000570139 OTOP1Q7RTM1 612 aa8.42□□□□□ -1.06
CNOT1-222ENST00000570139 CMTR2Q8IYT2 770 aaKnown RBP8.42□□□□□ -1.06
CNOT1-222ENST00000570139 ARPC5LQ9BPX5 153 aa8.42□□□□□ -1.06
CNOT1-222ENST00000570139 ISCA1Q9BUE6 129 aa8.42□□□□□ -1.06
CNOT1-222ENST00000570139 DUSP23Q9BVJ7 150 aa8.42□□□□□ -1.06
CNOT1-222ENST00000570139 BOCQ9BWV1 1114 aa8.42□□□□□ -1.06
CNOT1-222ENST00000570139 SLC12A9Q9BXP2 914 aa8.42□□□□□ -1.06
CNOT1-222ENST00000570139 GTF2IRD1Q9UHL9 959 aa8.42□□□□□ -1.06
CNOT1-222ENST00000570139 CCNL1Q9UK58 526 aaPredicted RBP8.42□□□□□ -1.06
CNOT1-222ENST00000570139 CDHR2Q9BYE9 1310 aa8.42□□□□□ -1.06
CNOT1-222ENST00000570139 COL24A1Q17RW2 1714 aa8.42□□□□□ -1.06
CNOT1-222ENST00000570139 MYH3P11055 1940 aa8.42□□□□□ -1.06
CNOT1-222ENST00000570139 MYH14Q7Z406 1995 aaKnown RBP8.41□□□□□ -1.06
CNOT1-222ENST00000570139 C4AP0C0L4 1744 aa8.41□□□□□ -1.06
CNOT1-222ENST00000570139 NPHP3-ACAD11A0A0J9YXS1 232 aa8.41□□□□□ -1.06
CNOT1-222ENST00000570139 ANO9A1A5B4 782 aa8.41□□□□□ -1.06
CNOT1-222ENST00000570139 GNB5O14775 395 aa8.41□□□□□ -1.06
CNOT1-222ENST00000570139 SRGAP3O43295 1099 aa8.41□□□□□ -1.06
CNOT1-222ENST00000570139 CBX7O95931 251 aa8.41□□□□□ -1.06
CNOT1-222ENST00000570139 VAV1P15498 845 aa8.41□□□□□ -1.06
CNOT1-222ENST00000570139 HOXB4P17483 251 aaPredicted RBP8.41□□□□□ -1.06
CNOT1-222ENST00000570139 ENDOUP21128 410 aaKnown RBP8.41□□□□□ -1.06
CNOT1-222ENST00000570139 GTF2A2P52657 109 aa8.41□□□□□ -1.06
CNOT1-222ENST00000570139 RABL6Q3YEC7 729 aaPredicted RBP8.41□□□□□ -1.06
CNOT1-222ENST00000570139 ARHGAP29Q52LW3 1261 aa8.41□□□□□ -1.06
CNOT1-222ENST00000570139 INTS5Q6P9B9 1019 aaKnown RBP8.41□□□□□ -1.06
CNOT1-222ENST00000570139 TMED8Q6PL24 325 aaPredicted RBP8.41□□□□□ -1.06
CNOT1-222ENST00000570139 SEZ6L2Q6UXD5 910 aa8.41□□□□□ -1.06
CNOT1-222ENST00000570139 EPM2AIP1Q7L775 607 aaPredicted RBP8.41□□□□□ -1.06
CNOT1-222ENST00000570139 CISD2Q8N5K1 135 aaKnown RBP8.41□□□□□ -1.06
CNOT1-222ENST00000570139 RCBTB1Q8NDN9 531 aa8.41□□□□□ -1.06
CNOT1-222ENST00000570139 TIFAQ96CG3 184 aa8.41□□□□□ -1.06
CNOT1-222ENST00000570139 LRRCC1Q9C099 1032 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms