RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 PARNO95453 639 aaKnown RBP10.09□□□□□ -0.79
GTF3C1-210ENST00000569394 SRGAP2CP0DJJ0 459 aa10.09□□□□□ -0.79
GTF3C1-210ENST00000569394 U2AF2P26368 475 aaKnown RBP eCLIP10.09□□□□□ -0.79
GTF3C1-210ENST00000569394 TMOD1P28289 359 aa10.09□□□□□ -0.79
GTF3C1-210ENST00000569394 GATMP50440 423 aa10.09□□□□□ -0.79
GTF3C1-210ENST00000569394 POLGP54098 1239 aaPredicted RBP10.09□□□□□ -0.79
GTF3C1-210ENST00000569394 CUL4AQ13619 759 aa10.09□□□□□ -0.79
GTF3C1-210ENST00000569394 CCDC85BQ15834 202 aaPredicted RBP10.09□□□□□ -0.79
GTF3C1-210ENST00000569394 LONRF3Q496Y0 759 aa10.09□□□□□ -0.79
GTF3C1-210ENST00000569394 PAN2Q504Q3 1202 aaKnown RBP10.09□□□□□ -0.79
GTF3C1-210ENST00000569394 TSHZ1Q6ZSZ6 1077 aa10.09□□□□□ -0.79
GTF3C1-210ENST00000569394 ARNTL2Q8WYA1 636 aa10.09□□□□□ -0.79
GTF3C1-210ENST00000569394 NLRP4Q96MN2 994 aa10.09□□□□□ -0.79
GTF3C1-210ENST00000569394 NIFKQ9BYG3 293 aaKnown RBP10.09□□□□□ -0.79
GTF3C1-210ENST00000569394 ZSWIM4Q9H7M6 989 aa10.09□□□□□ -0.79
GTF3C1-210ENST00000569394 SUCLA2Q9P2R7 463 aaPredicted RBP10.09□□□□□ -0.79
GTF3C1-210ENST00000569394 ST3GAL5Q9UNP4 418 aa10.09□□□□□ -0.79
GTF3C1-210ENST00000569394 A0A087WZ62 844 aa10.08□□□□□ -0.8
GTF3C1-210ENST00000569394 ENPP3O14638 875 aa10.08□□□□□ -0.8
GTF3C1-210ENST00000569394 USO1O60763 962 aaKnown RBP10.08□□□□□ -0.8
GTF3C1-210ENST00000569394 CAND2O75155 1236 aa10.08□□□□□ -0.8
GTF3C1-210ENST00000569394 GPR32O75388 356 aa10.08□□□□□ -0.8
GTF3C1-210ENST00000569394 CCT6AP40227 531 aaKnown RBP10.08□□□□□ -0.8
GTF3C1-210ENST00000569394 DNM2P50570 870 aa10.08□□□□□ -0.8
GTF3C1-210ENST00000569394 TARBP2Q15633 366 aaKnown RBP10.08□□□□□ -0.8
GTF3C1-210ENST00000569394 IL17AQ16552 155 aa10.08□□□□□ -0.8
GTF3C1-210ENST00000569394 POTEGQ6S5H5 508 aa10.08□□□□□ -0.8
GTF3C1-210ENST00000569394 OTUD6AQ7L8S5 288 aa10.08□□□□□ -0.8
GTF3C1-210ENST00000569394 RTN4RL1Q86UN2 441 aaPredicted RBP10.08□□□□□ -0.8
GTF3C1-210ENST00000569394 FAM228AQ86W67 206 aa10.08□□□□□ -0.8
GTF3C1-210ENST00000569394 CATSPER3Q86XQ3 398 aa10.08□□□□□ -0.8
GTF3C1-210ENST00000569394 NME8Q8N427 588 aa10.08□□□□□ -0.8
GTF3C1-210ENST00000569394 C4orf32Q8N8J7 132 aa10.08□□□□□ -0.8
GTF3C1-210ENST00000569394 RNF169Q8NCN4 708 aa10.08□□□□□ -0.8
GTF3C1-210ENST00000569394 LINC01599Q8WXQ3 324 aa10.08□□□□□ -0.8
GTF3C1-210ENST00000569394 YME1L1Q96TA2 773 aa10.08□□□□□ -0.8
GTF3C1-210ENST00000569394 FDXACB1Q9BRP7 624 aaPredicted RBP10.08□□□□□ -0.8
GTF3C1-210ENST00000569394 TMX1Q9H3N1 280 aa10.08□□□□□ -0.8
GTF3C1-210ENST00000569394 LRWD1Q9UFC0 647 aa10.08□□□□□ -0.8
GTF3C1-210ENST00000569394 PCDHA11Q9Y5I1 949 aa10.08□□□□□ -0.8
GTF3C1-210ENST00000569394 DENND3A2RUS2 1198 aa10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 VWA3AA6NCI4 1184 aa10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 MGEA5O60502 916 aa10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 DKC1O60832 514 aaKnown RBP eCLIP10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 MAFO75444 373 aaPredicted RBP10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 FOSL2P15408 326 aa10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 LIG1P18858 919 aa10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 SYT1P21579 422 aa10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 GPC3P51654 580 aa10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 CRYBB1P53674 252 aaPredicted RBP10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 EMC2Q15006 297 aa10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 ECM1Q16610 540 aa10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 DTHD1Q6ZMT9 781 aa10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 RPAINQ86UA6 219 aa10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 C4orf19Q8IY42 314 aa10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 PHOSPHO2Q8TCD6 241 aa10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 SNX29Q8TEQ0 813 aa10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 PRPF31Q8WWY3 499 aaKnown RBP10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 SLC7A3Q8WY07 619 aa10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 APBB2Q92870 758 aa10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 CEP89Q96ST8 783 aa10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 ADAM2Q99965 735 aa10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 HSD17B14Q9BPX1 270 aa10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 DAXXQ9UER7 740 aaPredicted RBP10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 LRFN2Q9ULH4 789 aa10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 CLIC4Q9Y696 253 aa10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 ARID2Q68CP9 1835 aa10.07□□□□□ -0.8
GTF3C1-210ENST00000569394 EPOPA6NHQ4 379 aa10.06□□□□□ -0.8
GTF3C1-210ENST00000569394 GJB5O95377 273 aa10.06□□□□□ -0.8
GTF3C1-210ENST00000569394 SSBP05455 408 aaKnown RBP eCLIP10.06□□□□□ -0.8
GTF3C1-210ENST00000569394 SPATA31C1P0DKV0 1188 aa10.06□□□□□ -0.8
GTF3C1-210ENST00000569394 TRAPPC10P48553 1259 aa10.06□□□□□ -0.8
GTF3C1-210ENST00000569394 TAP1Q03518 808 aa10.06□□□□□ -0.8
GTF3C1-210ENST00000569394 DHX8Q14562 1220 aaKnown RBP10.06□□□□□ -0.8
GTF3C1-210ENST00000569394 SF3A1Q15459 793 aaKnown RBP10.06□□□□□ -0.8
GTF3C1-210ENST00000569394 RILPL1Q5EBL4 403 aa10.06□□□□□ -0.8
GTF3C1-210ENST00000569394 SPECC1Q5M775 1068 aa10.06□□□□□ -0.8
GTF3C1-210ENST00000569394 FAM102BQ5T8I3 360 aa10.06□□□□□ -0.8
GTF3C1-210ENST00000569394 ERMNQ8TAM6 284 aa10.06□□□□□ -0.8
GTF3C1-210ENST00000569394 PHF12Q96QT6 1004 aa10.06□□□□□ -0.8
GTF3C1-210ENST00000569394 MTRQ99707 1265 aa10.06□□□□□ -0.8
GTF3C1-210ENST00000569394 C17orf80Q9BSJ5 609 aa10.06□□□□□ -0.8
GTF3C1-210ENST00000569394 ADAMTS10Q9H324 1103 aa10.06□□□□□ -0.8
GTF3C1-210ENST00000569394 ERVK-5Q9HDB9 667 aa10.06□□□□□ -0.8
GTF3C1-210ENST00000569394 GPRC5CQ9NQ84 441 aa10.06□□□□□ -0.8
GTF3C1-210ENST00000569394 KIAA1024Q9UPX6 916 aa10.06□□□□□ -0.8
GTF3C1-210ENST00000569394 STXBP5LQ9Y2K9 1186 aa10.06□□□□□ -0.8
GTF3C1-210ENST00000569394 MYO9BQ13459 2157 aa10.06□□□□□ -0.8
GTF3C1-210ENST00000569394 LAMA2P24043 3122 aaKnown RBP10.06□□□□□ -0.8
GTF3C1-210ENST00000569394 ARHGEF35A5YM69 484 aa10.05□□□□□ -0.8
GTF3C1-210ENST00000569394 E9PMD0 336 aa10.05□□□□□ -0.8
GTF3C1-210ENST00000569394 GPR182O15218 404 aa10.05□□□□□ -0.8
GTF3C1-210ENST00000569394 EFCAB14O75071 495 aa10.05□□□□□ -0.8
GTF3C1-210ENST00000569394 ZSCAN20P17040 1043 aaPredicted RBP10.05□□□□□ -0.8
GTF3C1-210ENST00000569394 EIF4BP23588 611 aaKnown RBP10.05□□□□□ -0.8
GTF3C1-210ENST00000569394 MARCKSP29966 332 aaPredicted RBP10.05□□□□□ -0.8
GTF3C1-210ENST00000569394 GRIN1Q05586 938 aa10.05□□□□□ -0.8
GTF3C1-210ENST00000569394 RAD51AP2Q09MP3 1159 aa10.05□□□□□ -0.8
GTF3C1-210ENST00000569394 CATSPER4Q7RTX7 472 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms