RNA–Protein interactions for RNA: ENST00000568340.5

CDH11-214, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-214ENST00000568340 MYBP10242 640 aa11.45□□□□□ -0.58
CDH11-214ENST00000568340 GLRA2P23416 452 aa11.45□□□□□ -0.58
CDH11-214ENST00000568340 CPT1AP50416 773 aa11.45□□□□□ -0.58
CDH11-214ENST00000568340 KCNA1Q09470 495 aa11.45□□□□□ -0.58
CDH11-214ENST00000568340 LRRC41Q15345 812 aa11.45□□□□□ -0.58
CDH11-214ENST00000568340 CDKAL1Q5VV42 579 aa11.45□□□□□ -0.58
CDH11-214ENST00000568340 CDCA2Q69YH5 1023 aaPredicted RBP11.45□□□□□ -0.58
CDH11-214ENST00000568340 ZNF720Q7Z2F6 126 aa11.45□□□□□ -0.58
CDH11-214ENST00000568340 IRF2BP1Q8IU81 584 aa11.45□□□□□ -0.58
CDH11-214ENST00000568340 AOPEPQ8N6M6 819 aa11.45□□□□□ -0.58
CDH11-214ENST00000568340 TMEM161BQ8NDZ6 487 aa11.45□□□□□ -0.58
CDH11-214ENST00000568340 ZNF507Q8TCN5 953 aa11.45□□□□□ -0.58
CDH11-214ENST00000568340 RAET1EQ8TD07 263 aa11.45□□□□□ -0.58
CDH11-214ENST00000568340 LMBR1Q8WVP7 490 aa11.45□□□□□ -0.58
CDH11-214ENST00000568340 DHTKD1Q96HY7 919 aaPredicted RBP11.45□□□□□ -0.58
CDH11-214ENST00000568340 BEGAINQ9BUH8 593 aa11.45□□□□□ -0.58
CDH11-214ENST00000568340 GTPBP4Q9BZE4 634 aaKnown RBP11.45□□□□□ -0.58
CDH11-214ENST00000568340 POLR3FQ9H1D9 316 aaPredicted RBP11.45□□□□□ -0.58
CDH11-214ENST00000568340 PAK6Q9NQU5 681 aaPredicted RBP11.45□□□□□ -0.58
CDH11-214ENST00000568340 ZNF215Q9UL58 517 aaPredicted RBP11.45□□□□□ -0.58
CDH11-214ENST00000568340 CTNND2Q9UQB3 1225 aa11.45□□□□□ -0.58
CDH11-214ENST00000568340 CENPFP49454 3210 aa11.45□□□□□ -0.58
CDH11-214ENST00000568340 GOLGA6L3A6NEY3 463 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 CCDC85CA6NKD9 419 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 TGFB1I1O43294 461 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 FAM13AO94988 1023 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 EDN1P05305 212 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 RARBP10826 455 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 CCNE1P24864 410 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 NMT1P30419 496 aaKnown RBP11.44□□□□□ -0.58
CDH11-214ENST00000568340 NPTX2P47972 431 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 PSEN2P49810 448 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 GTF2BQ00403 316 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 MYL5Q02045 173 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 PAK1Q13153 545 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 MFSD10Q14728 455 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 GRIK4Q16099 956 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 HERC4Q5GLZ8 1057 aaPredicted RBP11.44□□□□□ -0.58
CDH11-214ENST00000568340 ZNF484Q5JVG2 852 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 TMEM174Q8WUU8 243 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 NELFBQ8WX92 580 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 KIFAP3Q92845 792 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 P2RX5Q93086 422 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 DRC1Q96MC2 740 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 KIFC3Q9BVG8 833 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 IKZF4Q9H2S9 585 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 C17orf75Q9HAS0 396 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 XPNPEP3Q9NQH7 507 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 NRBP2Q9NSY0 501 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 TBC1D7Q9P0N9 293 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 MAPK8IP1Q9UQF2 711 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 BRCA2P51587 3418 aa11.44□□□□□ -0.58
CDH11-214ENST00000568340 GAS2O43903 313 aaKnown RBP11.43□□□□□ -0.58
CDH11-214ENST00000568340 KRT18P05783 430 aaKnown RBP11.43□□□□□ -0.58
CDH11-214ENST00000568340 C6orf222P0C671 652 aaPredicted RBP11.43□□□□□ -0.58
CDH11-214ENST00000568340 SMIM10L2AP0DMW4 78 aa11.43□□□□□ -0.58
CDH11-214ENST00000568340 SMIM10L2BP0DMW5 78 aa11.43□□□□□ -0.58
CDH11-214ENST00000568340 PPP1R2P41236 205 aa11.43□□□□□ -0.58
CDH11-214ENST00000568340 MNX1P50219 401 aaPredicted RBP11.43□□□□□ -0.58
CDH11-214ENST00000568340 POLGP54098 1239 aaPredicted RBP11.43□□□□□ -0.58
CDH11-214ENST00000568340 PPFIA1Q13136 1202 aa11.43□□□□□ -0.58
CDH11-214ENST00000568340 CAPSQ13938 189 aa11.43□□□□□ -0.58
CDH11-214ENST00000568340 ARHGEF6Q15052 776 aa11.43□□□□□ -0.58
CDH11-214ENST00000568340 KIAA0753Q2KHM9 967 aa11.43□□□□□ -0.58
CDH11-214ENST00000568340 UVSSAQ2YD98 709 aa11.43□□□□□ -0.58
CDH11-214ENST00000568340 ZC2HC1CQ53FD0 456 aaPredicted RBP11.43□□□□□ -0.58
CDH11-214ENST00000568340 KLHL10Q6JEL2 608 aa11.43□□□□□ -0.58
CDH11-214ENST00000568340 SARM1Q6SZW1 724 aa11.43□□□□□ -0.58
CDH11-214ENST00000568340 MAEAQ7L5Y9 396 aa11.43□□□□□ -0.58
CDH11-214ENST00000568340 TRMT1LQ7Z2T5 733 aaKnown RBP11.43□□□□□ -0.58
CDH11-214ENST00000568340 SESTD1Q86VW0 696 aa11.43□□□□□ -0.58
CDH11-214ENST00000568340 IFNLR1Q8IU57 520 aaPredicted RBP11.43□□□□□ -0.58
CDH11-214ENST00000568340 MYOCDQ8IZQ8 938 aa11.43□□□□□ -0.58
CDH11-214ENST00000568340 SH3TC2Q8TF17 1288 aa11.43□□□□□ -0.58
CDH11-214ENST00000568340 TMEM143Q96AN5 459 aa11.43□□□□□ -0.58
CDH11-214ENST00000568340 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.43□□□□□ -0.58
CDH11-214ENST00000568340 CCDC113Q9H0I3 377 aa11.43□□□□□ -0.58
CDH11-214ENST00000568340 AP5M1Q9H0R1 490 aa11.43□□□□□ -0.58
CDH11-214ENST00000568340 DACH1Q9UI36 760 aa11.43□□□□□ -0.58
CDH11-214ENST00000568340 TRPC6Q9Y210 931 aa11.43□□□□□ -0.58
CDH11-214ENST00000568340 TRAF3IP3Q9Y228 551 aa11.43□□□□□ -0.58
CDH11-214ENST00000568340 MSCO60682 206 aa11.42□□□□□ -0.58
CDH11-214ENST00000568340 KPNA6O60684 536 aa11.42□□□□□ -0.58
CDH11-214ENST00000568340 PRPF6O94906 941 aaKnown RBP11.42□□□□□ -0.58
CDH11-214ENST00000568340 NAMPTP43490 491 aa11.42□□□□□ -0.58
CDH11-214ENST00000568340 MRE11P49959 708 aa11.42□□□□□ -0.58
CDH11-214ENST00000568340 CLCN3P51790 818 aa11.42□□□□□ -0.58
CDH11-214ENST00000568340 PEX3P56589 373 aa11.42□□□□□ -0.58
CDH11-214ENST00000568340 STX17P56962 302 aa11.42□□□□□ -0.58
CDH11-214ENST00000568340 MCCD1P59942 119 aaPredicted RBP11.42□□□□□ -0.58
CDH11-214ENST00000568340 TBC1D8BQ0IIM8 1120 aa11.42□□□□□ -0.58
CDH11-214ENST00000568340 NFIL3Q16649 462 aa11.42□□□□□ -0.58
CDH11-214ENST00000568340 ODR4Q5SWX8 454 aa11.42□□□□□ -0.58
CDH11-214ENST00000568340 L1TD1Q5T7N2 865 aaKnown RBP11.42□□□□□ -0.58
CDH11-214ENST00000568340 FAM102BQ5T8I3 360 aa11.42□□□□□ -0.58
CDH11-214ENST00000568340 SPATA1Q5VX52 437 aa11.42□□□□□ -0.58
CDH11-214ENST00000568340 ANKRD40Q6AI12 368 aa11.42□□□□□ -0.58
CDH11-214ENST00000568340 SLC39A4Q6P5W5 647 aa11.42□□□□□ -0.58
CDH11-214ENST00000568340 MTHFD1LQ6UB35 978 aa11.42□□□□□ -0.58
CDH11-214ENST00000568340 MAP4K3Q8IVH8 894 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms