RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 GCLCP48506 637 aaPredicted RBP7.75□□□□□ -1.17
SMG1-215ENST00000568239 TMEM63BQ5T3F8 832 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 CHADLQ6NUI6 762 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 METTL7BQ6UX53 244 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 ARMCX2Q7L311 632 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 ANKRD23Q86SG2 305 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 TRIM50Q86XT4 487 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 TMTC1Q8IUR5 882 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 FAM186BQ8IYM0 893 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 RETREG2Q8NC44 543 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 SHCBP1Q8NEM2 672 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 SEPT1Q8WYJ6 367 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 SPATA33Q96N06 139 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 ACCSQ96QU6 501 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 TMEM206Q9H813 350 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 ATP6V0A4Q9HBG4 840 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 LZTFL1Q9NQ48 299 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 CPA4Q9UI42 421 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 DDX41Q9UJV9 622 aaKnown RBP7.75□□□□□ -1.17
SMG1-215ENST00000568239 FAM184BQ9ULE4 1060 aa7.75□□□□□ -1.17
SMG1-215ENST00000568239 GSTTP1A0A1W2PQM5 241 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 DENND3A2RUS2 1198 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 ASB14A6NK59 587 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 RASSF10A6NK89 507 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 SOCS7O14512 581 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 CCDC175P0C221 793 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 ATP4AP20648 1035 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 NPTX2P47972 431 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 ZBED6P86452 979 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 APBA1Q02410 837 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 FAM160B1Q5W0V3 765 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 RRAGAQ7L523 313 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 FRMD5Q7Z6J6 570 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 MCPH1Q8NEM0 835 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 SLC7A3Q8WY07 619 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 KIFAP3Q92845 792 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 TMEM143Q96AN5 459 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 TIPINQ9BVW5 301 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 LSM14BQ9BX40 385 aaKnown RBP7.74□□□□□ -1.17
SMG1-215ENST00000568239 METTL14Q9HCE5 456 aaKnown RBP7.74□□□□□ -1.17
SMG1-215ENST00000568239 SIK3Q9Y2K2 1263 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 MAFBQ9Y5Q3 323 aaPredicted RBP7.74□□□□□ -1.17
SMG1-215ENST00000568239 UBE4BO95155 1302 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 IGSF9BQ9UPX0 1349 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 STBD1O95210 358 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 ITGBL1O95965 494 aaPredicted RBP7.74□□□□□ -1.17
SMG1-215ENST00000568239 AFPP02771 609 aaKnown RBP7.74□□□□□ -1.17
SMG1-215ENST00000568239 KCNJ6P48051 423 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 POLR2FP61218 127 aaKnown RBP7.74□□□□□ -1.17
SMG1-215ENST00000568239 KCNMA1Q12791 1236 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 TTLL4Q14679 1199 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 GJC2Q5T442 439 aaPredicted RBP7.74□□□□□ -1.17
SMG1-215ENST00000568239 KCNV1Q6PIU1 500 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 GPR142Q7Z601 462 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 ACRBPQ8NEB7 543 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 BSNDQ8WZ55 320 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 IFT74Q96LB3 600 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 CBWD1Q9BRT8 395 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 POLR3FQ9H1D9 316 aaPredicted RBP7.74□□□□□ -1.17
SMG1-215ENST00000568239 NRBP2Q9NSY0 501 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 SLC45A1Q9Y2W3 748 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 DOCK3Q8IZD9 2030 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 ATG7O95352 703 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 MARSP56192 900 aaKnown RBP7.74□□□□□ -1.17
SMG1-215ENST00000568239 EMC2Q15006 297 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 ENOX2Q16206 610 aaKnown RBP7.74□□□□□ -1.17
SMG1-215ENST00000568239 CELF3Q5SZQ8 465 aaKnown RBP7.74□□□□□ -1.17
SMG1-215ENST00000568239 SYT10Q6XYQ8 523 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 NYAP1Q6ZVC0 841 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 PAXIP1Q6ZW49 1069 aaPredicted RBP7.74□□□□□ -1.17
SMG1-215ENST00000568239 ZC3H3Q8IXZ2 948 aaKnown RBP7.74□□□□□ -1.17
SMG1-215ENST00000568239 GOLGA5Q8TBA6 731 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 BICD1Q96G01 975 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 TTYH3Q9C0H2 523 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 SUGCTQ9HAC7 445 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 XPNPEP1Q9NQW7 623 aa7.74□□□□□ -1.17
SMG1-215ENST00000568239 GOLGA8IPA6NC78 632 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 LRRIQ4A6NIV6 560 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 GOLGA8JA6NMD2 632 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 SLC16A3O15427 465 aaKnown RBP7.73□□□□□ -1.17
SMG1-215ENST00000568239 PPP1R37O75864 691 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 GTF2BQ00403 316 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 ARID5AQ03989 594 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 ALCAMQ13740 583 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 TAF1CQ15572 869 aaPredicted RBP7.73□□□□□ -1.17
SMG1-215ENST00000568239 REXO1L1PQ8IX06 675 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 KIF18AQ8NI77 898 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 SCFD2Q8WU76 684 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 PCYT2Q99447 389 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 DNAJC7Q99615 494 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 DNAI1Q9UI46 699 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 TBX20Q9UMR3 447 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 ADGRG1Q9Y653 693 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 LRRC53A6NM62 1247 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 STRNO43815 780 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 IPO7O95373 1038 aaKnown RBP7.73□□□□□ -1.17
SMG1-215ENST00000568239 TRIM49P0CI25 452 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 TRIM49CP0CI26 452 aa7.73□□□□□ -1.17
SMG1-215ENST00000568239 MAPTP10636 758 aaKnown RBP7.73□□□□□ -1.17
SMG1-215ENST00000568239 ACTN1P12814 892 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms