RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 TAAR1Q96RJ0 339 aa8.82□□□□□ -1
SMG1-214ENST00000568038 ARHGAP39Q9C0H5 1083 aa8.82□□□□□ -1
SMG1-214ENST00000568038 MUC3BQ9H195 1237 aa8.82□□□□□ -1
SMG1-214ENST00000568038 GLT8D2Q9H1C3 349 aa8.82□□□□□ -1
SMG1-214ENST00000568038 SAGE1Q9NXZ1 904 aa8.82□□□□□ -1
SMG1-214ENST00000568038 CYP39A1Q9NYL5 469 aa8.82□□□□□ -1
SMG1-214ENST00000568038 COL20A1Q9P218 1284 aa8.82□□□□□ -1
SMG1-214ENST00000568038 CNTN3Q9P232 1028 aa8.82□□□□□ -1
SMG1-214ENST00000568038 PFASO15067 1338 aa8.81□□□□□ -1
SMG1-214ENST00000568038 CCDC194A0A1B0GVG4 234 aa8.81□□□□□ -1
SMG1-214ENST00000568038 CARNS1A5YM72 827 aa8.81□□□□□ -1
SMG1-214ENST00000568038 A6NHS1 94 aa8.81□□□□□ -1
SMG1-214ENST00000568038 SLC15A5A6NIM6 579 aa8.81□□□□□ -1
SMG1-214ENST00000568038 TNPO2O14787 897 aaKnown RBP8.81□□□□□ -1
SMG1-214ENST00000568038 STRNO43815 780 aa8.81□□□□□ -1
SMG1-214ENST00000568038 FKTNO75072 461 aa8.81□□□□□ -1
SMG1-214ENST00000568038 ZSCAN22P10073 491 aaPredicted RBP8.81□□□□□ -1
SMG1-214ENST00000568038 PCSK2P16519 638 aa8.81□□□□□ -1
SMG1-214ENST00000568038 MPSTP25325 297 aa8.81□□□□□ -1
SMG1-214ENST00000568038 ADORA2AP29274 412 aa8.81□□□□□ -1
SMG1-214ENST00000568038 CTGFP29279 349 aa8.81□□□□□ -1
SMG1-214ENST00000568038 FCGRTP55899 365 aa8.81□□□□□ -1
SMG1-214ENST00000568038 UBXN2AP68543 259 aa8.81□□□□□ -1
SMG1-214ENST00000568038 CNTN2Q02246 1040 aa8.81□□□□□ -1
SMG1-214ENST00000568038 KIF22Q14807 665 aa8.81□□□□□ -1
SMG1-214ENST00000568038 EARS2Q5JPH6 523 aaKnown RBP8.81□□□□□ -1
SMG1-214ENST00000568038 PDE12Q6L8Q7 609 aaKnown RBP8.81□□□□□ -1
SMG1-214ENST00000568038 PIK3AP1Q6ZUJ8 805 aa8.81□□□□□ -1
SMG1-214ENST00000568038 AGGF1Q8N302 714 aaeCLIP8.81□□□□□ -1
SMG1-214ENST00000568038 SAMD3Q8N6K7 520 aa8.81□□□□□ -1
SMG1-214ENST00000568038 CD99L2Q8TCZ2 262 aa8.81□□□□□ -1
SMG1-214ENST00000568038 ANO3Q9BYT9 981 aa8.81□□□□□ -1
SMG1-214ENST00000568038 FOXP1Q9H334 677 aaPredicted RBP8.81□□□□□ -1
SMG1-214ENST00000568038 MAP3K20Q9NYL2 800 aaKnown RBP8.81□□□□□ -1
SMG1-214ENST00000568038 ZDHHC9Q9Y397 364 aa8.81□□□□□ -1
SMG1-214ENST00000568038 F8W735 103 aaPredicted RBP8.8□□□□□ -1
SMG1-214ENST00000568038 COBLO75128 1261 aa8.8□□□□□ -1
SMG1-214ENST00000568038 BRD1O95696 1058 aa8.8□□□□□ -1
SMG1-214ENST00000568038 F13A1P00488 732 aa8.8□□□□□ -1
SMG1-214ENST00000568038 FOSP01100 380 aaPredicted RBP8.8□□□□□ -1
SMG1-214ENST00000568038 PDIA4P13667 645 aaKnown RBP8.8□□□□□ -1
SMG1-214ENST00000568038 ATP2B1P20020 1258 aa8.8□□□□□ -1
SMG1-214ENST00000568038 U2AF2P26368 475 aaKnown RBP eCLIP8.8□□□□□ -12e-7■■■■□ 23.3
SMG1-214ENST00000568038 NUCB2P80303 420 aa8.8□□□□□ -1
SMG1-214ENST00000568038 CAP1Q01518 475 aa8.8□□□□□ -1
SMG1-214ENST00000568038 GHRHRQ02643 423 aa8.8□□□□□ -1
SMG1-214ENST00000568038 RESTQ13127 1097 aa8.8□□□□□ -1
SMG1-214ENST00000568038 AP3B2Q13367 1082 aa8.8□□□□□ -1
SMG1-214ENST00000568038 NONOQ15233 471 aaKnown RBP eCLIP8.8□□□□□ -1
SMG1-214ENST00000568038 INF2Q27J81 1249 aa8.8□□□□□ -1
SMG1-214ENST00000568038 ARHGEF16Q5VV41 709 aa8.8□□□□□ -1
SMG1-214ENST00000568038 FAM173BQ6P4H8 233 aa8.8□□□□□ -1
SMG1-214ENST00000568038 DPP9Q86TI2 863 aa8.8□□□□□ -1
SMG1-214ENST00000568038 MAP4K3Q8IVH8 894 aa8.8□□□□□ -1
SMG1-214ENST00000568038 NOSTRINQ8IVI9 506 aa8.8□□□□□ -1
SMG1-214ENST00000568038 ABRAQ8N0Z2 381 aa8.8□□□□□ -1
SMG1-214ENST00000568038 CACTIN-AS1Q8N1I8 211 aa8.8□□□□□ -1
SMG1-214ENST00000568038 GALNT11Q8NCW6 608 aa8.8□□□□□ -1
SMG1-214ENST00000568038 ZNF296Q8WUU4 475 aaPredicted RBP8.8□□□□□ -1
SMG1-214ENST00000568038 RMDN3Q96TC7 470 aa8.8□□□□□ -1
SMG1-214ENST00000568038 PBX4Q9BYU1 374 aa8.8□□□□□ -1
SMG1-214ENST00000568038 CHMP5Q9NZZ3 219 aa8.8□□□□□ -1
SMG1-214ENST00000568038 DNAJC25-GNG10A0A024R161 153 aa8.79□□□□□ -1
SMG1-214ENST00000568038 KIF4AO95239 1232 aa8.79□□□□□ -1
SMG1-214ENST00000568038 MYCLP12524 364 aaPredicted RBP8.79□□□□□ -1
SMG1-214ENST00000568038 GLB1P16278 677 aa8.79□□□□□ -1
SMG1-214ENST00000568038 CYP2B6P20813 491 aa8.79□□□□□ -1
SMG1-214ENST00000568038 EIF1AXP47813 144 aaKnown RBP8.79□□□□□ -1
SMG1-214ENST00000568038 GRB14Q14449 540 aa8.79□□□□□ -1
SMG1-214ENST00000568038 ZNF792Q3KQV3 632 aa8.79□□□□□ -1
SMG1-214ENST00000568038 MCTP2Q6DN12 878 aa8.79□□□□□ -1
SMG1-214ENST00000568038 ADAMTSL4Q6UY14 1074 aa8.79□□□□□ -1
SMG1-214ENST00000568038 JMYQ8N9B5 988 aa8.79□□□□□ -1
SMG1-214ENST00000568038 FAM133AQ8N9E0 248 aa8.79□□□□□ -1
SMG1-214ENST00000568038 C1orf127Q8N9H9 656 aa8.79□□□□□ -1
SMG1-214ENST00000568038 NPLOC4Q8TAT6 608 aa8.79□□□□□ -1
SMG1-214ENST00000568038 NSUN6Q8TEA1 469 aaKnown RBP8.79□□□□□ -1
SMG1-214ENST00000568038 TBCKQ8TEA7 893 aa8.79□□□□□ -1
SMG1-214ENST00000568038 ERO1AQ96HE7 468 aa8.79□□□□□ -1
SMG1-214ENST00000568038 MAF1Q9H063 256 aa8.79□□□□□ -1
SMG1-214ENST00000568038 ZSCAN16Q9H4T2 348 aaPredicted RBP8.79□□□□□ -1
SMG1-214ENST00000568038 EHMT1Q9H9B1 1298 aa8.79□□□□□ -1
SMG1-214ENST00000568038 SRA1Q9HD15 236 aaKnown RBP8.79□□□□□ -1
SMG1-214ENST00000568038 PXMP2Q9NR77 195 aa8.79□□□□□ -1
SMG1-214ENST00000568038 GJD2Q9UKL4 321 aa8.79□□□□□ -1
SMG1-214ENST00000568038 GABRQQ9UN88 632 aa8.79□□□□□ -1
SMG1-214ENST00000568038 DDX49Q9Y6V7 483 aaKnown RBP8.79□□□□□ -1
SMG1-214ENST00000568038 ZNFX1Q9P2E3 1918 aaKnown RBP8.79□□□□□ -1
SMG1-214ENST00000568038 DOCK3Q8IZD9 2030 aa8.78□□□□□ -1
SMG1-214ENST00000568038 ZSWIM8A7E2V4 1837 aa8.78□□□□□ -1
SMG1-214ENST00000568038 PLXNB2O15031 1838 aa8.78□□□□□ -1
SMG1-214ENST00000568038 FOXN1O15353 648 aa8.78□□□□□ -1
SMG1-214ENST00000568038 PDGFAP04085 211 aa8.78□□□□□ -1
SMG1-214ENST00000568038 RPLP1P05386 114 aaKnown RBP8.78□□□□□ -1
SMG1-214ENST00000568038 HSPA1AP0DMV8 641 aaKnown RBP8.78□□□□□ -1
SMG1-214ENST00000568038 HSPA1BP0DMV9 641 aaKnown RBP8.78□□□□□ -1
SMG1-214ENST00000568038 CES1P23141 567 aa8.78□□□□□ -1
SMG1-214ENST00000568038 HOXD10P28358 340 aa8.78□□□□□ -1
SMG1-214ENST00000568038 SREBF1P36956 1147 aa8.78□□□□□ -1
SMG1-214ENST00000568038 RGS2P41220 211 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms