RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 TCF20Q9UGU0 1960 aaKnown RBP12.36□□□□□ -0.43
LINC01228-201ENST00000567966 TRANK1O15050 2925 aa12.35□□□□□ -0.43
LINC01228-201ENST00000567966 KAT6AQ92794 2004 aa12.35□□□□□ -0.43
LINC01228-201ENST00000567966 COL1A2P08123 1366 aa12.35□□□□□ -0.43
LINC01228-201ENST00000567966 MAGEB2O15479 319 aa12.35□□□□□ -0.43
LINC01228-201ENST00000567966 GTPBP6O43824 516 aaPredicted RBP12.35□□□□□ -0.43
LINC01228-201ENST00000567966 TRAK2O60296 914 aa12.35□□□□□ -0.43
LINC01228-201ENST00000567966 PPP6R2O75170 966 aa12.35□□□□□ -0.43
LINC01228-201ENST00000567966 CHRNA1P02708 482 aa12.35□□□□□ -0.43
LINC01228-201ENST00000567966 MRPS5P82675 430 aaKnown RBP12.35□□□□□ -0.43
LINC01228-201ENST00000567966 PKP1Q13835 747 aa12.35□□□□□ -0.43
LINC01228-201ENST00000567966 SKIV2LQ15477 1246 aaKnown RBP12.35□□□□□ -0.43
LINC01228-201ENST00000567966 FAM26DQ5JW98 314 aa12.35□□□□□ -0.43
LINC01228-201ENST00000567966 KRT79Q5XKE5 535 aa12.35□□□□□ -0.43
LINC01228-201ENST00000567966 NCAPH2Q6IBW4 605 aa12.35□□□□□ -0.43
LINC01228-201ENST00000567966 TAF2Q6P1X5 1199 aa12.35□□□□□ -0.43
LINC01228-201ENST00000567966 FAM43BQ6ZT52 329 aaPredicted RBP12.35□□□□□ -0.43
LINC01228-201ENST00000567966 RPAINQ86UA6 219 aa12.35□□□□□ -0.43
LINC01228-201ENST00000567966 MYOCDQ8IZQ8 938 aa12.35□□□□□ -0.43
LINC01228-201ENST00000567966 LINC00301Q8NCQ3 95 aa12.35□□□□□ -0.43
LINC01228-201ENST00000567966 KCNG4Q8TDN1 519 aa12.35□□□□□ -0.43
LINC01228-201ENST00000567966 NACC1Q96RE7 527 aa12.35□□□□□ -0.43
LINC01228-201ENST00000567966 USP28Q96RU2 1077 aa12.35□□□□□ -0.43
LINC01228-201ENST00000567966 SUGCTQ9HAC7 445 aa12.35□□□□□ -0.43
LINC01228-201ENST00000567966 ANKEF1Q9NU02 776 aa12.35□□□□□ -0.43
LINC01228-201ENST00000567966 RCOR1Q9UKL0 485 aa12.35□□□□□ -0.43
LINC01228-201ENST00000567966 CLIC4Q9Y696 253 aa12.35□□□□□ -0.43
LINC01228-201ENST00000567966 IGSF9BQ9UPX0 1349 aa12.35□□□□□ -0.43
LINC01228-201ENST00000567966 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.34□□□□□ -0.43
LINC01228-201ENST00000567966 MBLAC1A4D2B0 266 aaPredicted RBP12.34□□□□□ -0.43
LINC01228-201ENST00000567966 ZNF862O60290 1169 aa12.34□□□□□ -0.43
LINC01228-201ENST00000567966 EFCAB14O75071 495 aa12.34□□□□□ -0.43
LINC01228-201ENST00000567966 CAND2O75155 1236 aa12.34□□□□□ -0.43
LINC01228-201ENST00000567966 OATP04181 439 aa12.34□□□□□ -0.43
LINC01228-201ENST00000567966 INSRRP14616 1297 aa12.34□□□□□ -0.43
LINC01228-201ENST00000567966 ATP4AP20648 1035 aa12.34□□□□□ -0.43
LINC01228-201ENST00000567966 KCNQ1P51787 676 aa12.34□□□□□ -0.43
LINC01228-201ENST00000567966 ERVK-21P61565 698 aa12.34□□□□□ -0.43
LINC01228-201ENST00000567966 CDC42EP1Q00587 391 aa12.34□□□□□ -0.43
LINC01228-201ENST00000567966 PPFIA1Q13136 1202 aa12.34□□□□□ -0.43
LINC01228-201ENST00000567966 GRIK4Q16099 956 aa12.34□□□□□ -0.43
LINC01228-201ENST00000567966 IL17AQ16552 155 aa12.34□□□□□ -0.43
LINC01228-201ENST00000567966 MARCH8Q5T0T0 291 aa12.34□□□□□ -0.43
LINC01228-201ENST00000567966 FAM173BQ6P4H8 233 aa12.34□□□□□ -0.43
LINC01228-201ENST00000567966 NME8Q8N427 588 aa12.34□□□□□ -0.43
LINC01228-201ENST00000567966 SEPT8Q92599 483 aa12.34□□□□□ -0.43
LINC01228-201ENST00000567966 NECAB3Q96P71 396 aaPredicted RBP12.34□□□□□ -0.43
LINC01228-201ENST00000567966 JPH2Q9BR39 696 aaPredicted RBP12.34□□□□□ -0.43
LINC01228-201ENST00000567966 C17orf80Q9BSJ5 609 aa12.34□□□□□ -0.43
LINC01228-201ENST00000567966 SCAND2PQ9GZW5 306 aaPredicted RBP12.34□□□□□ -0.43
LINC01228-201ENST00000567966 PRRC2BQ5JSZ5 2229 aaKnown RBP12.34□□□□□ -0.43
LINC01228-201ENST00000567966 SPTBN5Q9NRC6 3674 aaKnown RBP12.34□□□□□ -0.43
LINC01228-201ENST00000567966 SPTLC2O15270 562 aa12.33□□□□□ -0.44
LINC01228-201ENST00000567966 UPP2O95045 317 aa12.33□□□□□ -0.44
LINC01228-201ENST00000567966 STBD1O95210 358 aa12.33□□□□□ -0.44
LINC01228-201ENST00000567966 AMHP03971 560 aa12.33□□□□□ -0.44
LINC01228-201ENST00000567966 SPATA31C1P0DKV0 1188 aa12.33□□□□□ -0.44
LINC01228-201ENST00000567966 BMP1P13497 986 aa12.33□□□□□ -0.44
LINC01228-201ENST00000567966 UBA7P41226 1012 aa12.33□□□□□ -0.44
LINC01228-201ENST00000567966 IGBP1P78318 339 aa12.33□□□□□ -0.44
LINC01228-201ENST00000567966 KRT85P78386 507 aa12.33□□□□□ -0.44
LINC01228-201ENST00000567966 HTRA4P83105 476 aaPredicted RBP12.33□□□□□ -0.44
LINC01228-201ENST00000567966 MGAT3Q09327 533 aa12.33□□□□□ -0.44
LINC01228-201ENST00000567966 STK38Q15208 465 aa12.33□□□□□ -0.44
LINC01228-201ENST00000567966 TARBP2Q15633 366 aaKnown RBP12.33□□□□□ -0.44
LINC01228-201ENST00000567966 RSPH3Q86UC2 560 aa12.33□□□□□ -0.44
LINC01228-201ENST00000567966 CATSPER3Q86XQ3 398 aa12.33□□□□□ -0.44
LINC01228-201ENST00000567966 TPH2Q8IWU9 490 aa12.33□□□□□ -0.44
LINC01228-201ENST00000567966 KRI1Q8N9T8 703 aaKnown RBP12.33□□□□□ -0.44
LINC01228-201ENST00000567966 ADAMTS19Q8TE59 1207 aa12.33□□□□□ -0.44
LINC01228-201ENST00000567966 TRAPPC12Q8WVT3 735 aa12.33□□□□□ -0.44
LINC01228-201ENST00000567966 DNAJB3Q8WWF6 145 aa12.33□□□□□ -0.44
LINC01228-201ENST00000567966 DYDC2Q96IM9 177 aa12.33□□□□□ -0.44
LINC01228-201ENST00000567966 DCBLD2Q96PD2 775 aa12.33□□□□□ -0.44
LINC01228-201ENST00000567966 TGS1Q96RS0 853 aaKnown RBP12.33□□□□□ -0.44
LINC01228-201ENST00000567966 LXNQ9BS40 222 aa12.33□□□□□ -0.44
LINC01228-201ENST00000567966 NT5C3AQ9H0P0 336 aa12.33□□□□□ -0.44
LINC01228-201ENST00000567966 RGL1Q9NZL6 768 aa12.33□□□□□ -0.44
LINC01228-201ENST00000567966 TFIP11Q9UBB9 837 aaKnown RBP12.33□□□□□ -0.44
LINC01228-201ENST00000567966 PCDHA2Q9Y5H9 948 aa12.33□□□□□ -0.44
LINC01228-201ENST00000567966 XIRP2A4UGR9 3374 aa12.32□□□□□ -0.44
LINC01228-201ENST00000567966 VWA3AA6NCI4 1184 aa12.32□□□□□ -0.44
LINC01228-201ENST00000567966 POTEMA6NI47 508 aa12.32□□□□□ -0.44
LINC01228-201ENST00000567966 TNFRSF10AO00220 468 aa12.32□□□□□ -0.44
LINC01228-201ENST00000567966 GHRP10912 638 aa12.32□□□□□ -0.44
LINC01228-201ENST00000567966 YWHABP31946 246 aaKnown RBP12.32□□□□□ -0.44
LINC01228-201ENST00000567966 TIE1P35590 1138 aa12.32□□□□□ -0.44
LINC01228-201ENST00000567966 PRKCEQ02156 737 aa12.32□□□□□ -0.44
LINC01228-201ENST00000567966 HYIQ5T013 277 aa12.32□□□□□ -0.44
LINC01228-201ENST00000567966 FOXD4L5Q5VV16 416 aaPredicted RBP12.32□□□□□ -0.44
LINC01228-201ENST00000567966 ANO5Q75V66 913 aa12.32□□□□□ -0.44
LINC01228-201ENST00000567966 BANK1Q8NDB2 785 aa12.32□□□□□ -0.44
LINC01228-201ENST00000567966 FOXD4L4Q8WXT5 416 aaPredicted RBP12.32□□□□□ -0.44
LINC01228-201ENST00000567966 TOP1MTQ969P6 601 aa12.32□□□□□ -0.44
LINC01228-201ENST00000567966 CCSER1Q9C0I3 900 aa12.32□□□□□ -0.44
LINC01228-201ENST00000567966 TUBE1Q9UJT0 475 aa12.32□□□□□ -0.44
LINC01228-201ENST00000567966 FBXO2Q9UK22 296 aaPredicted RBP12.32□□□□□ -0.44
LINC01228-201ENST00000567966 DBR1Q9UK59 544 aaKnown RBP12.32□□□□□ -0.44
LINC01228-201ENST00000567966 DNM3Q9UQ16 869 aa12.32□□□□□ -0.44
LINC01228-201ENST00000567966 INSL6Q9Y581 213 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms