RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 TMEM60Q9H2L4 133 aa28.19■■■□□ 2.1
FANCA-228ENST00000567943 TTC12Q9H892 705 aaPredicted RBP28.19■■■□□ 2.1
FANCA-228ENST00000567943 THEGQ9P2T0 379 aa28.19■■■□□ 2.1
FANCA-228ENST00000567943 SMC3Q9UQE7 1217 aa28.19■■■□□ 2.1
FANCA-228ENST00000567943 C9IYK1 514 aa28.18■■■□□ 2.1
FANCA-228ENST00000567943 ZBTB39O15060 712 aa28.18■■■□□ 2.1
FANCA-228ENST00000567943 EIF4BP23588 611 aaKnown RBP28.18■■■□□ 2.1
FANCA-228ENST00000567943 U2AF2P26368 475 aaKnown RBP eCLIP28.18■■■□□ 2.16e-8■□□□□ 9.9
FANCA-228ENST00000567943 SARSP49591 514 aaKnown RBP28.18■■■□□ 2.1
FANCA-228ENST00000567943 ZNF174Q15697 407 aa28.18■■■□□ 2.1
FANCA-228ENST00000567943 CYP26B1Q9NR63 512 aa28.18■■■□□ 2.1
FANCA-228ENST00000567943 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.18■■■□□ 2.1
FANCA-228ENST00000567943 H3BNC9 293 aa28.17■■■□□ 2.1
FANCA-228ENST00000567943 DKC1O60832 514 aaKnown RBP eCLIP28.17■■■□□ 2.1
FANCA-228ENST00000567943 SLITRK3O94933 977 aa28.17■■■□□ 2.1
FANCA-228ENST00000567943 BTG3Q14201 252 aaPredicted RBP28.17■■■□□ 2.1
FANCA-228ENST00000567943 CTTNQ14247 550 aaKnown RBP28.17■■■□□ 2.1
FANCA-228ENST00000567943 TTC38Q5R3I4 469 aa28.17■■■□□ 2.1
FANCA-228ENST00000567943 C4orf19Q8IY42 314 aa28.17■■■□□ 2.1
FANCA-228ENST00000567943 ZNF710Q8N1W2 664 aa28.17■■■□□ 2.1
FANCA-228ENST00000567943 NOL7Q9UMY1 257 aaKnown RBP28.17■■■□□ 2.1
FANCA-228ENST00000567943 CSDE1O75534 798 aaKnown RBP28.16■■■□□ 2.1
FANCA-228ENST00000567943 DARSP14868 501 aaKnown RBP28.16■■■□□ 2.1
FANCA-228ENST00000567943 FAM189BP81408 668 aa28.16■■■□□ 2.1
FANCA-228ENST00000567943 CYP4A11Q02928 519 aa28.16■■■□□ 2.1
FANCA-228ENST00000567943 FAM43BQ6ZT52 329 aaPredicted RBP28.16■■■□□ 2.1
FANCA-228ENST00000567943 SLC24A5Q71RS6 500 aa28.16■■■□□ 2.1
FANCA-228ENST00000567943 ATXN2LQ8WWM7 1075 aaKnown RBP28.16■■■□□ 2.1
FANCA-228ENST00000567943 HSD17B14Q9BPX1 270 aa28.16■■■□□ 2.1
FANCA-228ENST00000567943 MRPL42Q9Y6G3 142 aaKnown RBP28.16■■■□□ 2.1
FANCA-228ENST00000567943 DENND3A2RUS2 1198 aa28.15■■■□□ 2.1
FANCA-228ENST00000567943 C5orf67F2Z3F1 127 aa28.15■■■□□ 2.1
FANCA-228ENST00000567943 FGFR4P22455 802 aa28.15■■■□□ 2.1
FANCA-228ENST00000567943 BMPR1AP36894 532 aa28.15■■■□□ 2.1
FANCA-228ENST00000567943 TRAPPC10P48553 1259 aa28.15■■■□□ 2.1
FANCA-228ENST00000567943 TFF2Q03403 129 aa28.15■■■□□ 2.1
FANCA-228ENST00000567943 GPM6BQ13491 265 aa28.15■■■□□ 2.1
FANCA-228ENST00000567943 ODR4Q5SWX8 454 aa28.15■■■□□ 2.1
FANCA-228ENST00000567943 MCTP1Q6DN14 999 aa28.15■■■□□ 2.1
FANCA-228ENST00000567943 KSR1Q8IVT5 923 aa28.15■■■□□ 2.1
FANCA-228ENST00000567943 CMTR2Q8IYT2 770 aaKnown RBP28.15■■■□□ 2.1
FANCA-228ENST00000567943 EIF2AK1Q9BQI3 630 aaKnown RBP28.15■■■□□ 2.1
FANCA-228ENST00000567943 C1orf112Q9NSG2 853 aa28.15■■■□□ 2.1
FANCA-228ENST00000567943 H3BQV1 296 aa28.14■■■□□ 2.1
FANCA-228ENST00000567943 STAG3L1P0CL83 205 aa28.14■■■□□ 2.1
FANCA-228ENST00000567943 IBSPP21815 317 aaPredicted RBP28.14■■■□□ 2.1
FANCA-228ENST00000567943 YWHABP31946 246 aaKnown RBP28.14■■■□□ 2.1
FANCA-228ENST00000567943 CTNNB1P35222 781 aa28.14■■■□□ 2.1
FANCA-228ENST00000567943 ORC2Q13416 577 aaPredicted RBP28.14■■■□□ 2.1
FANCA-228ENST00000567943 NBR1Q14596 966 aa28.14■■■□□ 2.1
FANCA-228ENST00000567943 PAN2Q504Q3 1202 aaKnown RBP28.14■■■□□ 2.1
FANCA-228ENST00000567943 ASB2Q96Q27 587 aa28.14■■■□□ 2.1
FANCA-228ENST00000567943 DHX33Q9H6R0 707 aaKnown RBP28.14■■■□□ 2.1
FANCA-228ENST00000567943 SUCLA2Q9P2R7 463 aaPredicted RBP28.14■■■□□ 2.1
FANCA-228ENST00000567943 CUL4AQ13619 759 aa28.13■■■□□ 2.09
FANCA-228ENST00000567943 SKIV2LQ15477 1246 aaKnown RBP28.13■■■□□ 2.09
FANCA-228ENST00000567943 FAM102BQ5T8I3 360 aa28.13■■■□□ 2.09
FANCA-228ENST00000567943 TPH2Q8IWU9 490 aa28.13■■■□□ 2.09
FANCA-228ENST00000567943 NLRP7Q8WX94 980 aa28.13■■■□□ 2.09
FANCA-228ENST00000567943 MRPL38Q96DV4 380 aaKnown RBP28.13■■■□□ 2.09
FANCA-228ENST00000567943 CEP170P1Q96L14 293 aa28.13■■■□□ 2.09
FANCA-228ENST00000567943 ZSWIM4Q9H7M6 989 aa28.13■■■□□ 2.09
FANCA-228ENST00000567943 PCDHB7Q9Y5E2 793 aa28.13■■■□□ 2.09
FANCA-228ENST00000567943 TCF20Q9UGU0 1960 aaKnown RBP28.12■■■□□ 2.09
FANCA-228ENST00000567943 A0A087WZ62 844 aa28.12■■■□□ 2.09
FANCA-228ENST00000567943 POTEMA6NI47 508 aa28.12■■■□□ 2.09
FANCA-228ENST00000567943 OR52Z1P0C646 297 aa28.12■■■□□ 2.09
FANCA-228ENST00000567943 TJAP1Q5JTD0 557 aa28.12■■■□□ 2.09
FANCA-228ENST00000567943 RHPN2Q8IUC4 686 aa28.12■■■□□ 2.09
FANCA-228ENST00000567943 FDXACB1Q9BRP7 624 aaPredicted RBP28.12■■■□□ 2.09
FANCA-228ENST00000567943 LRFN2Q9ULH4 789 aa28.12■■■□□ 2.09
FANCA-228ENST00000567943 RB1P06400 928 aa28.11■■■□□ 2.09
FANCA-228ENST00000567943 DNM2P50570 870 aa28.11■■■□□ 2.09
FANCA-228ENST00000567943 TOB1P50616 345 aaPredicted RBP28.11■■■□□ 2.09
FANCA-228ENST00000567943 MRPS5P82675 430 aaKnown RBP28.11■■■□□ 2.09
FANCA-228ENST00000567943 SCLT1Q96NL6 688 aa28.11■■■□□ 2.09
FANCA-228ENST00000567943 RNF19AQ9NV58 838 aa28.11■■■□□ 2.09
FANCA-228ENST00000567943 GRM6O15303 877 aa28.1■■■□□ 2.09
FANCA-228ENST00000567943 LYPLA2O95372 231 aa28.1■■■□□ 2.09
FANCA-228ENST00000567943 CDC42EP1Q00587 391 aa28.1■■■□□ 2.09
FANCA-228ENST00000567943 LARP1BQ659C4 914 aaKnown RBP28.1■■■□□ 2.09
FANCA-228ENST00000567943 NEK9Q8TD19 979 aa28.1■■■□□ 2.09
FANCA-228ENST00000567943 TMEM143Q96AN5 459 aa28.1■■■□□ 2.09
FANCA-228ENST00000567943 IFT122Q9HBG6 1241 aa28.1■■■□□ 2.09
FANCA-228ENST00000567943 BMP2KQ9NSY1 1161 aaPredicted RBP28.1■■■□□ 2.09
FANCA-228ENST00000567943 TMEM161AQ9NX61 479 aa28.1■■■□□ 2.09
FANCA-228ENST00000567943 RWDD3Q9Y3V2 267 aa28.1■■■□□ 2.09
FANCA-228ENST00000567943 PPME1Q9Y570 386 aa28.1■■■□□ 2.09
FANCA-228ENST00000567943 PLXNA4Q9HCM2 1894 aa28.09■■■□□ 2.09
FANCA-228ENST00000567943 FGFR1P11362 822 aa28.09■■■□□ 2.09
FANCA-228ENST00000567943 TECP42680 631 aa28.09■■■□□ 2.09
FANCA-228ENST00000567943 XKR9Q5GH70 373 aa28.09■■■□□ 2.09
FANCA-228ENST00000567943 OTUD6AQ7L8S5 288 aa28.09■■■□□ 2.09
FANCA-228ENST00000567943 ZNF410Q86VK4 478 aa28.09■■■□□ 2.09
FANCA-228ENST00000567943 PRPF31Q8WWY3 499 aaKnown RBP28.09■■■□□ 2.09
FANCA-228ENST00000567943 SLC7A3Q8WY07 619 aa28.09■■■□□ 2.09
FANCA-228ENST00000567943 JPH2Q9BR39 696 aaPredicted RBP28.09■■■□□ 2.09
FANCA-228ENST00000567943 GCOM2Q9BZD3 368 aaPredicted RBP28.09■■■□□ 2.09
FANCA-228ENST00000567943 ELAC1Q9H777 363 aaKnown RBP28.09■■■□□ 2.09
FANCA-228ENST00000567943 HCSTQ9UBK5 93 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms