RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 GPC3P51654 580 aa14.16□□□□□ -0.14
GINS3-209ENST00000567909 WDR5P61964 334 aaKnown RBP14.16□□□□□ -0.14
GINS3-209ENST00000567909 NFX1Q12986 1120 aaKnown RBP14.16□□□□□ -0.14
GINS3-209ENST00000567909 SLC39A14Q15043 492 aa14.16□□□□□ -0.14
GINS3-209ENST00000567909 SPECC1Q5M775 1068 aa14.16□□□□□ -0.14
GINS3-209ENST00000567909 USP38Q8NB14 1042 aa14.16□□□□□ -0.14
GINS3-209ENST00000567909 RASSF8Q8NHQ8 419 aa14.16□□□□□ -0.14
GINS3-209ENST00000567909 TMEM40Q8WWA1 233 aa14.16□□□□□ -0.14
GINS3-209ENST00000567909 TCP11Q8WWU5 503 aa14.16□□□□□ -0.14
GINS3-209ENST00000567909 PRPF31Q8WWY3 499 aaKnown RBP14.16□□□□□ -0.14
GINS3-209ENST00000567909 PSPC1Q8WXF1 523 aaKnown RBP14.16□□□□□ -0.14
GINS3-209ENST00000567909 APBB2Q92870 758 aa14.16□□□□□ -0.14
GINS3-209ENST00000567909 LRCH3Q96II8 777 aa14.16□□□□□ -0.14
GINS3-209ENST00000567909 AK8Q96MA6 479 aa14.16□□□□□ -0.14
GINS3-209ENST00000567909 NLRP4Q96MN2 994 aa14.16□□□□□ -0.14
GINS3-209ENST00000567909 CLIC6Q96NY7 704 aa14.16□□□□□ -0.14
GINS3-209ENST00000567909 CSRNP2Q9H175 543 aa14.16□□□□□ -0.14
GINS3-209ENST00000567909 BHMT2Q9H2M3 363 aa14.16□□□□□ -0.14
GINS3-209ENST00000567909 ADAMTS10Q9H324 1103 aa14.16□□□□□ -0.14
GINS3-209ENST00000567909 XPNPEP1Q9NQW7 623 aa14.16□□□□□ -0.14
GINS3-209ENST00000567909 FBXO2Q9UK22 296 aaPredicted RBP14.16□□□□□ -0.14
GINS3-209ENST00000567909 DNM3Q9UQ16 869 aa14.16□□□□□ -0.14
GINS3-209ENST00000567909 ZDHHC9Q9Y397 364 aa14.16□□□□□ -0.14
GINS3-209ENST00000567909 NOC2LQ9Y3T9 749 aaKnown RBP14.16□□□□□ -0.14
GINS3-209ENST00000567909 COL4A3BPQ9Y5P4 624 aa14.16□□□□□ -0.14
GINS3-209ENST00000567909 SQORQ9Y6N5 450 aa14.16□□□□□ -0.14
GINS3-209ENST00000567909 A0A087WZ62 844 aa14.15□□□□□ -0.14
GINS3-209ENST00000567909 EFCAB14O75071 495 aa14.15□□□□□ -0.14
GINS3-209ENST00000567909 CSDE1O75534 798 aaKnown RBP14.15□□□□□ -0.14
GINS3-209ENST00000567909 SRGAP2CP0DJJ0 459 aa14.15□□□□□ -0.14
GINS3-209ENST00000567909 FXR1P51114 621 aaKnown RBP eCLIP14.15□□□□□ -0.14
GINS3-209ENST00000567909 DEFB103AP81534 67 aa14.15□□□□□ -0.14
GINS3-209ENST00000567909 GRB10Q13322 594 aa14.15□□□□□ -0.14
GINS3-209ENST00000567909 PADI6Q6TGC4 694 aa14.15□□□□□ -0.14
GINS3-209ENST00000567909 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.15□□□□□ -0.14
GINS3-209ENST00000567909 KCNK18Q7Z418 384 aa14.15□□□□□ -0.14
GINS3-209ENST00000567909 TMCO2Q7Z6W1 182 aaPredicted RBP14.15□□□□□ -0.14
GINS3-209ENST00000567909 ZNF710Q8N1W2 664 aa14.15□□□□□ -0.14
GINS3-209ENST00000567909 LINC00301Q8NCQ3 95 aa14.15□□□□□ -0.14
GINS3-209ENST00000567909 CALML4Q96GE6 196 aa14.15□□□□□ -0.14
GINS3-209ENST00000567909 PNMA5Q96PV4 448 aa14.15□□□□□ -0.14
GINS3-209ENST00000567909 FDXACB1Q9BRP7 624 aaPredicted RBP14.15□□□□□ -0.14
GINS3-209ENST00000567909 GCOM2Q9BZD3 368 aaPredicted RBP14.15□□□□□ -0.14
GINS3-209ENST00000567909 NT5C3AQ9H0P0 336 aa14.15□□□□□ -0.14
GINS3-209ENST00000567909 SRPRBQ9Y5M8 271 aaKnown RBP14.15□□□□□ -0.14
GINS3-209ENST00000567909 SPTLC2O15270 562 aa14.14□□□□□ -0.15
GINS3-209ENST00000567909 EYA4O95677 639 aa14.14□□□□□ -0.15
GINS3-209ENST00000567909 SSBP05455 408 aaKnown RBP eCLIP14.14□□□□□ -0.15
GINS3-209ENST00000567909 IBSPP21815 317 aaPredicted RBP14.14□□□□□ -0.15
GINS3-209ENST00000567909 FGFR4P22455 802 aa14.14□□□□□ -0.15
GINS3-209ENST00000567909 EIF4BP23588 611 aaKnown RBP14.14□□□□□ -0.15
GINS3-209ENST00000567909 ANP32AP39687 249 aaKnown RBP14.14□□□□□ -0.15
GINS3-209ENST00000567909 RABGGTBP53611 331 aa14.14□□□□□ -0.15
GINS3-209ENST00000567909 CDC42EP1Q00587 391 aa14.14□□□□□ -0.15
GINS3-209ENST00000567909 DNM1Q05193 864 aaKnown RBP14.14□□□□□ -0.15
GINS3-209ENST00000567909 LAMTOR4Q0VGL1 99 aa14.14□□□□□ -0.15
GINS3-209ENST00000567909 KARSQ15046 597 aaKnown RBP14.14□□□□□ -0.15
GINS3-209ENST00000567909 HYIQ5T013 277 aa14.14□□□□□ -0.15
GINS3-209ENST00000567909 FAM102BQ5T8I3 360 aa14.14□□□□□ -0.15
GINS3-209ENST00000567909 FAM117BQ6P1L5 589 aa14.14□□□□□ -0.15
GINS3-209ENST00000567909 USP49Q70CQ1 688 aa14.14□□□□□ -0.15
GINS3-209ENST00000567909 FAM228AQ86W67 206 aa14.14□□□□□ -0.15
GINS3-209ENST00000567909 MYOCDQ8IZQ8 938 aa14.14□□□□□ -0.15
GINS3-209ENST00000567909 KRI1Q8N9T8 703 aaKnown RBP14.14□□□□□ -0.15
GINS3-209ENST00000567909 MCPH1Q8NEM0 835 aa14.14□□□□□ -0.15
GINS3-209ENST00000567909 EPSTI1Q96J88 318 aa14.14□□□□□ -0.15
GINS3-209ENST00000567909 SLC9A7Q96T83 725 aa14.14□□□□□ -0.15
GINS3-209ENST00000567909 POLR3FQ9H1D9 316 aaPredicted RBP14.14□□□□□ -0.15
GINS3-209ENST00000567909 ERVK-5Q9HDB9 667 aa14.14□□□□□ -0.15
GINS3-209ENST00000567909 GPRC5CQ9NQ84 441 aa14.14□□□□□ -0.15
GINS3-209ENST00000567909 ST3GAL5Q9UNP4 418 aa14.14□□□□□ -0.15
GINS3-209ENST00000567909 MYO9BQ13459 2157 aa14.14□□□□□ -0.15
GINS3-209ENST00000567909 TTC3P53804 2025 aa14.14□□□□□ -0.15
GINS3-209ENST00000567909 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.13□□□□□ -0.15
GINS3-209ENST00000567909 GPR182O15218 404 aa14.13□□□□□ -0.15
GINS3-209ENST00000567909 UPP2O95045 317 aa14.13□□□□□ -0.15
GINS3-209ENST00000567909 YEATS4O95619 227 aa14.13□□□□□ -0.15
GINS3-209ENST00000567909 AMHP03971 560 aa14.13□□□□□ -0.15
GINS3-209ENST00000567909 DARSP14868 501 aaKnown RBP14.13□□□□□ -0.15
GINS3-209ENST00000567909 CYP11B2P19099 503 aa14.13□□□□□ -0.15
GINS3-209ENST00000567909 NCLP19338 710 aaKnown RBP14.13□□□□□ -0.15
GINS3-209ENST00000567909 PBX2P40425 430 aa14.13□□□□□ -0.15
GINS3-209ENST00000567909 SMAD3P84022 425 aaKnown RBP14.13□□□□□ -0.15
GINS3-209ENST00000567909 ODR4Q5SWX8 454 aa14.13□□□□□ -0.15
GINS3-209ENST00000567909 ZNF410Q86VK4 478 aa14.13□□□□□ -0.15
GINS3-209ENST00000567909 RNF149Q8NC42 400 aa14.13□□□□□ -0.15
GINS3-209ENST00000567909 PHOSPHO2Q8TCD6 241 aa14.13□□□□□ -0.15
GINS3-209ENST00000567909 ASAP3Q8TDY4 903 aa14.13□□□□□ -0.15
GINS3-209ENST00000567909 SYMPKQ92797 1274 aaKnown RBP14.13□□□□□ -0.15
GINS3-209ENST00000567909 CHAMP1Q96JM3 812 aa14.13□□□□□ -0.15
GINS3-209ENST00000567909 ZBED2Q9BTP6 218 aa14.13□□□□□ -0.15
GINS3-209ENST00000567909 TMX1Q9H3N1 280 aa14.13□□□□□ -0.15
GINS3-209ENST00000567909 POLD4Q9HCU8 107 aa14.13□□□□□ -0.15
GINS3-209ENST00000567909 CFAP45Q9UL16 551 aa14.13□□□□□ -0.15
GINS3-209ENST00000567909 DENND3A2RUS2 1198 aa14.12□□□□□ -0.15
GINS3-209ENST00000567909 ENPP3O14638 875 aa14.12□□□□□ -0.15
GINS3-209ENST00000567909 ASAP2O43150 1006 aa14.12□□□□□ -0.15
GINS3-209ENST00000567909 PPP6R2O75170 966 aa14.12□□□□□ -0.15
GINS3-209ENST00000567909 PLCG1P19174 1290 aa14.12□□□□□ -0.15
GINS3-209ENST00000567909 ARL2P36404 184 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms