RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 DENND3A2RUS2 1198 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 TBX3O15119 743 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 SLC37A4O43826 429 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 CCNT1O60563 726 aaKnown RBP5.38□□□□□ -1.55
CLK3-219ENST00000567805 DKC1O60832 514 aaKnown RBP eCLIP5.38□□□□□ -1.55
CLK3-219ENST00000567805 GPR32O75388 356 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 LARGE1O95461 756 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 MMP1P03956 469 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 VTNP04004 478 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 LINC00271P0C7V0 271 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 FDPSP14324 419 aaKnown RBP5.38□□□□□ -1.55
CLK3-219ENST00000567805 CTNNB1P35222 781 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 BMPR1AP36894 532 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 SARSP49591 514 aaKnown RBP5.38□□□□□ -1.55
CLK3-219ENST00000567805 CLCN3P51790 818 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 NLRP11P59045 1033 aaKnown RBP5.38□□□□□ -1.55
CLK3-219ENST00000567805 CDC42EP1Q00587 391 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 TFF2Q03403 129 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 TBC1D8BQ0IIM8 1120 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 NFX1Q12986 1120 aaKnown RBP5.38□□□□□ -1.55
CLK3-219ENST00000567805 GPM6BQ13491 265 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 TRIM29Q14134 588 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 BTG3Q14201 252 aaPredicted RBP5.38□□□□□ -1.55
CLK3-219ENST00000567805 TARBP2Q15633 366 aaKnown RBP5.38□□□□□ -1.55
CLK3-219ENST00000567805 UGCGQ16739 394 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 TMEM266Q2M3C6 531 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 TIGD5Q53EQ6 642 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 ARSIQ5FYB1 569 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 XKR3Q5GH77 459 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 PIK3AP1Q6ZUJ8 805 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 SLC24A5Q71RS6 500 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 RTN4RL1Q86UN2 441 aaPredicted RBP5.38□□□□□ -1.55
CLK3-219ENST00000567805 FAM228AQ86W67 206 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 SLFN12Q8IYM2 578 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 CMTR2Q8IYT2 770 aaKnown RBP5.38□□□□□ -1.55
CLK3-219ENST00000567805 LRRC71Q8N4P6 559 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 LINC01465Q8N7H1 131 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 OXER1Q8TDS5 423 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 TMEM40Q8WWA1 233 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 TNFRSF25Q93038 417 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 HLA-CQ95604 372 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 GJA10Q969M2 543 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 C11orf84Q9BUA3 381 aaPredicted RBP5.38□□□□□ -1.55
CLK3-219ENST00000567805 PLVAPQ9BX97 442 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 NIFKQ9BYG3 293 aaKnown RBP5.38□□□□□ -1.55
CLK3-219ENST00000567805 CDHR5Q9HBB8 845 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 RGS18Q9NS28 235 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 C1orf112Q9NSG2 853 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 GJB4Q9NTQ9 266 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 WDR70Q9NW82 654 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 PLA2G2EQ9NZK7 142 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 SEPT9Q9UHD8 586 aaPredicted RBP5.38□□□□□ -1.55
CLK3-219ENST00000567805 VAV3Q9UKW4 847 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 LRFN2Q9ULH4 789 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 ST3GAL5Q9UNP4 418 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 NOC2LQ9Y3T9 749 aaKnown RBP5.38□□□□□ -1.55
CLK3-219ENST00000567805 PCDHB7Q9Y5E2 793 aa5.38□□□□□ -1.55
CLK3-219ENST00000567805 IGKV6-21A0A0C4DH24 114 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 C9IYK1 514 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 EML1O00423 815 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 MARCH6O60337 910 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 MGEA5O60502 916 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 JAK2O60674 1132 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 DTNBO60941 627 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 STBD1O95210 358 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 BAG4O95429 457 aaKnown RBP5.37□□□□□ -1.55
CLK3-219ENST00000567805 P4HBP07237 508 aaKnown RBP5.37□□□□□ -1.55
CLK3-219ENST00000567805 BMP1P13497 986 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 EIF4BP23588 611 aaKnown RBP5.37□□□□□ -1.55
CLK3-219ENST00000567805 QARSP47897 775 aaKnown RBP5.37□□□□□ -1.55
CLK3-219ENST00000567805 DNM2P50570 870 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 GPC3P51654 580 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 PSMC5P62195 406 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 LSM11P83369 360 aaKnown RBP eCLIP5.37□□□□□ -1.55
CLK3-219ENST00000567805 NR5A1Q13285 461 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 DSC3Q14574 896 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 C8orf34Q49A92 452 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 MTERF2Q49AM1 385 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 NAALADL2Q58DX5 795 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 EARS2Q5JPH6 523 aaKnown RBP5.37□□□□□ -1.55
CLK3-219ENST00000567805 ANO5Q75V66 913 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 EXOC8Q8IYI6 725 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 BANK1Q8NDB2 785 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 ADAMTS19Q8TE59 1207 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 HAS1Q92839 578 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 KHSRPQ92945 711 aaKnown RBP eCLIP5.37□□□□□ -1.55
CLK3-219ENST00000567805 P2RX5Q93086 422 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 CEP89Q96ST8 783 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 PPP1R16BQ96T49 567 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 UHRF1Q96T88 793 aaPredicted RBP5.37□□□□□ -1.55
CLK3-219ENST00000567805 ADAM2Q99965 735 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 JPH2Q9BR39 696 aaPredicted RBP5.37□□□□□ -1.55
CLK3-219ENST00000567805 LLPHQ9BRT6 129 aaKnown RBP5.37□□□□□ -1.55
CLK3-219ENST00000567805 LMAN2LQ9H0V9 348 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 ADAMTS10Q9H324 1103 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 NSUN3Q9H649 340 aaKnown RBP5.37□□□□□ -1.55
CLK3-219ENST00000567805 ELAC1Q9H777 363 aaKnown RBP5.37□□□□□ -1.55
CLK3-219ENST00000567805 LIMCH1Q9UPQ0 1083 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 PPME1Q9Y570 386 aa5.37□□□□□ -1.55
CLK3-219ENST00000567805 MRPL42Q9Y6G3 142 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms