RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 ECEL1O95672 775 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 BMP3P12645 472 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 ZNF16P17020 682 aaPredicted RBP6.5□□□□□ -1.37
SF3B3-210ENST00000567654 LMNB1P20700 586 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 SYKP43405 635 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 PNOCQ13519 176 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 CDC37Q16543 378 aaPredicted RBP6.5□□□□□ -1.37
SF3B3-210ENST00000567654 FAM83BQ5T0W9 1011 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 SYDE2Q5VT97 1194 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 ANGEL2Q5VTE6 544 aaKnown RBP6.5□□□□□ -1.37
SF3B3-210ENST00000567654 KRBA2Q6ZNG9 492 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 CD163Q86VB7 1156 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 CACTIN-AS1Q8N1I8 211 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 AGGF1Q8N302 714 aaeCLIP6.5□□□□□ -1.37
SF3B3-210ENST00000567654 DTWD1Q8N5C7 304 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 LRRC15Q8TF66 581 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 EPSTI1Q96J88 318 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 CBX8Q9HC52 389 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 FBXO28Q9NVF7 368 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 KCNH3Q9ULD8 1083 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 TMX2Q9Y320 296 aa6.5□□□□□ -1.37
SF3B3-210ENST00000567654 MYH9P35579 1960 aaKnown RBP6.49□□□□□ -1.37
SF3B3-210ENST00000567654 TRPM7Q96QT4 1865 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 CCDC194A0A1B0GVG4 234 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 PP2D1A8MPX8 630 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 C1QTNF9BB2RNN3 333 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 BIN1O00499 593 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 CTAGE5O15320 804 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 POLR2DO15514 142 aaKnown RBP6.49□□□□□ -1.37
SF3B3-210ENST00000567654 SLC37A4O43826 429 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 TDP2O95551 362 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 CTSBP07858 339 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 CCDC192P0DO97 292 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 EIF4BP23588 611 aaKnown RBP6.49□□□□□ -1.37
SF3B3-210ENST00000567654 CASP1P29466 404 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 CDC25AP30304 524 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 CD68P34810 354 aaPredicted RBP6.49□□□□□ -1.37
SF3B3-210ENST00000567654 TRAPPC10P48553 1259 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 TNNI2P48788 182 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 ADCY7P51828 1080 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 DAB2P98082 770 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 C19orf57Q0VDD7 668 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 IQCB1Q15051 598 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 DPCR1Q3MIW9 517 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 PLA2G4EQ3MJ16 856 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 USH1GQ495M9 461 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 ISM2Q6H9L7 571 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 GALNT17Q6IS24 598 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 BTNL9Q6UXG8 535 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 LUZP1Q86V48 1076 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 GPC2Q8N158 579 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 REXO1Q8N1G1 1221 aaKnown RBP6.49□□□□□ -1.37
SF3B3-210ENST00000567654 PDILTQ8N807 584 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 JMYQ8N9B5 988 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 TBCKQ8TEA7 893 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 PDLIM2Q96JY6 352 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 TIGD1Q96MW7 591 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 PPP1R9BQ96SB3 815 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 DEFB129Q9H1M3 183 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 VCPKMTQ9H867 229 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 C6orf50Q9HD87 102 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 RIC8AQ9NPQ8 531 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 GGA3Q9NZ52 723 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 RNF181Q9P0P0 153 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 USP25Q9UHP3 1055 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 GPN3Q9UHW5 284 aaPredicted RBP6.49□□□□□ -1.37
SF3B3-210ENST00000567654 CEP131Q9UPN4 1083 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 AK5Q9Y6K8 562 aa6.49□□□□□ -1.37
SF3B3-210ENST00000567654 PLXNB2O15031 1838 aa6.48□□□□□ -1.37
SF3B3-210ENST00000567654 ADM5C9JUS6 153 aa6.48□□□□□ -1.37
SF3B3-210ENST00000567654 H7C1D1 291 aa6.48□□□□□ -1.37
SF3B3-210ENST00000567654 hCG_1984214I3L0E3 225 aa6.48□□□□□ -1.37
SF3B3-210ENST00000567654 MEIS2O14770 477 aa6.48□□□□□ -1.37
SF3B3-210ENST00000567654 CTSHP09668 335 aa6.48□□□□□ -1.37
SF3B3-210ENST00000567654 BMP6P22004 513 aa6.48□□□□□ -1.37
SF3B3-210ENST00000567654 GNA11P29992 359 aa6.48□□□□□ -1.37
SF3B3-210ENST00000567654 GSTT1P30711 240 aa6.48□□□□□ -1.37
SF3B3-210ENST00000567654 MMP14P50281 582 aa6.48□□□□□ -1.37
SF3B3-210ENST00000567654 NONOQ15233 471 aaKnown RBP eCLIP6.48□□□□□ -1.37
SF3B3-210ENST00000567654 STX1AQ16623 288 aa6.48□□□□□ -1.37
SF3B3-210ENST00000567654 LETM2Q2VYF4 491 aa6.48□□□□□ -1.37
SF3B3-210ENST00000567654 MEI1Q5TIA1 1274 aa6.48□□□□□ -1.37
SF3B3-210ENST00000567654 USP17L6PQ6QN14 398 aa6.48□□□□□ -1.37
SF3B3-210ENST00000567654 SASS6Q6UVJ0 657 aa6.48□□□□□ -1.37
SF3B3-210ENST00000567654 NEK8Q86SG6 692 aa6.48□□□□□ -1.37
SF3B3-210ENST00000567654 DHX40Q8IX18 779 aaKnown RBP6.48□□□□□ -1.37
SF3B3-210ENST00000567654 FAM177A1Q8N128 213 aaPredicted RBP6.48□□□□□ -1.37
SF3B3-210ENST00000567654 ZNF713Q8N859 430 aaPredicted RBP6.48□□□□□ -1.37
SF3B3-210ENST00000567654 CCDC12Q8WUD4 166 aaPredicted RBP6.48□□□□□ -1.37
SF3B3-210ENST00000567654 TBC1D5Q92609 795 aa6.48□□□□□ -1.37
SF3B3-210ENST00000567654 STAMQ92783 540 aa6.48□□□□□ -1.37
SF3B3-210ENST00000567654 ZKSCAN4Q969J2 545 aaPredicted RBP6.48□□□□□ -1.37
SF3B3-210ENST00000567654 GJA10Q969M2 543 aa6.48□□□□□ -1.37
SF3B3-210ENST00000567654 FERMT2Q96AC1 680 aa6.48□□□□□ -1.37
SF3B3-210ENST00000567654 DHX58Q96C10 678 aa6.48□□□□□ -1.37
SF3B3-210ENST00000567654 UIMC1Q96RL1 719 aa6.48□□□□□ -1.37
SF3B3-210ENST00000567654 ZNF341Q9BYN7 854 aa6.48□□□□□ -1.37
SF3B3-210ENST00000567654 TUBE1Q9UJT0 475 aa6.48□□□□□ -1.37
SF3B3-210ENST00000567654 CCNT1O60563 726 aaKnown RBP6.47□□□□□ -1.37
SF3B3-210ENST00000567654 DLGAP3O95886 979 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms