RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 SKIP12755 728 aa20.94■□□□□ 0.94
LINC01238-205ENST00000567549 GCFC2P16383 781 aaKnown RBP20.94■□□□□ 0.94
LINC01238-205ENST00000567549 CYP3A7P24462 503 aa20.94■□□□□ 0.94
LINC01238-205ENST00000567549 TOB2Q14106 344 aaPredicted RBP20.94■□□□□ 0.94
LINC01238-205ENST00000567549 NLRP7Q8WX94 980 aa20.94■□□□□ 0.94
LINC01238-205ENST00000567549 PPP1R16BQ96T49 567 aa20.94■□□□□ 0.94
LINC01238-205ENST00000567549 MRPL9Q9BYD2 267 aaKnown RBP20.94■□□□□ 0.94
LINC01238-205ENST00000567549 GCOM2Q9BZD3 368 aaPredicted RBP20.94■□□□□ 0.94
LINC01238-205ENST00000567549 TLE6Q9H808 572 aa20.94■□□□□ 0.94
LINC01238-205ENST00000567549 CDHR5Q9HBB8 845 aa20.94■□□□□ 0.94
LINC01238-205ENST00000567549 PDRG1Q9NUG6 133 aa20.94■□□□□ 0.94
LINC01238-205ENST00000567549 CCDC194A0A1B0GVG4 234 aa20.93■□□□□ 0.94
LINC01238-205ENST00000567549 MGEA5O60502 916 aa20.93■□□□□ 0.94
LINC01238-205ENST00000567549 FGF18O76093 207 aa20.93■□□□□ 0.94
LINC01238-205ENST00000567549 CSPG5O95196 566 aa20.93■□□□□ 0.94
LINC01238-205ENST00000567549 EOMESO95936 686 aa20.93■□□□□ 0.94
LINC01238-205ENST00000567549 SFPQP23246 707 aaKnown RBP eCLIP20.93■□□□□ 0.94
LINC01238-205ENST00000567549 LTBRP36941 435 aa20.93■□□□□ 0.94
LINC01238-205ENST00000567549 ANKRD1Q15327 319 aa20.93■□□□□ 0.94
LINC01238-205ENST00000567549 COLGALT1Q8NBJ5 622 aa20.93■□□□□ 0.94
LINC01238-205ENST00000567549 WASF1Q92558 559 aa20.93■□□□□ 0.94
LINC01238-205ENST00000567549 UNC45AQ9H3U1 944 aa20.93■□□□□ 0.94
LINC01238-205ENST00000567549 CD320Q9NPF0 282 aa20.93■□□□□ 0.94
LINC01238-205ENST00000567549 CHST12Q9NRB3 414 aa20.93■□□□□ 0.94
LINC01238-205ENST00000567549 SEPT9Q9UHD8 586 aaPredicted RBP20.93■□□□□ 0.94
LINC01238-205ENST00000567549 PPME1Q9Y570 386 aa20.93■□□□□ 0.94
LINC01238-205ENST00000567549 C19orf67A6NJJ6 358 aa20.92■□□□□ 0.94
LINC01238-205ENST00000567549 PPFIA3O75145 1194 aa20.92■□□□□ 0.94
LINC01238-205ENST00000567549 PSMD10O75832 226 aa20.92■□□□□ 0.94
LINC01238-205ENST00000567549 EYA4O95677 639 aa20.92■□□□□ 0.94
LINC01238-205ENST00000567549 NRIP1P48552 1158 aa20.92■□□□□ 0.94
LINC01238-205ENST00000567549 COASYQ13057 564 aa20.92■□□□□ 0.94
LINC01238-205ENST00000567549 DSC3Q14574 896 aa20.92■□□□□ 0.94
LINC01238-205ENST00000567549 LRRC71Q8N4P6 559 aa20.92■□□□□ 0.94
LINC01238-205ENST00000567549 ZNF558Q96NG5 402 aa20.92■□□□□ 0.94
LINC01238-205ENST00000567549 NIFKQ9BYG3 293 aaKnown RBP20.92■□□□□ 0.94
LINC01238-205ENST00000567549 ADAMTS10Q9H324 1103 aa20.92■□□□□ 0.94
LINC01238-205ENST00000567549 NGRNQ9NPE2 291 aaKnown RBP20.92■□□□□ 0.94
LINC01238-205ENST00000567549 TYW1Q9NV66 732 aaKnown RBP20.92■□□□□ 0.94
LINC01238-205ENST00000567549 DDX25Q9UHL0 483 aaKnown RBP20.92■□□□□ 0.94
LINC01238-205ENST00000567549 ZNF862O60290 1169 aa20.91■□□□□ 0.94
LINC01238-205ENST00000567549 MARCH6O60337 910 aa20.91■□□□□ 0.94
LINC01238-205ENST00000567549 TBX10O75333 385 aa20.91■□□□□ 0.94
LINC01238-205ENST00000567549 DARSP14868 501 aaKnown RBP20.91■□□□□ 0.94
LINC01238-205ENST00000567549 GATMP50440 423 aa20.91■□□□□ 0.94
LINC01238-205ENST00000567549 GPC3P51654 580 aa20.91■□□□□ 0.94
LINC01238-205ENST00000567549 PLCB3Q01970 1234 aa20.91■□□□□ 0.94
LINC01238-205ENST00000567549 CAMK1Q14012 370 aa20.91■□□□□ 0.94
LINC01238-205ENST00000567549 FAM102BQ5T8I3 360 aa20.91■□□□□ 0.94
LINC01238-205ENST00000567549 ZNF410Q86VK4 478 aa20.91■□□□□ 0.94
LINC01238-205ENST00000567549 LINC01465Q8N7H1 131 aa20.91■□□□□ 0.94
LINC01238-205ENST00000567549 FAM20AQ96MK3 541 aa20.91■□□□□ 0.94
LINC01238-205ENST00000567549 SLKQ9H2G2 1235 aaPredicted RBP20.91■□□□□ 0.94
LINC01238-205ENST00000567549 BRMS1Q9HCU9 246 aa20.91■□□□□ 0.94
LINC01238-205ENST00000567549 STK36Q9NRP7 1315 aa20.9■□□□□ 0.94
LINC01238-205ENST00000567549 PSMC5P62195 406 aa20.9■□□□□ 0.94
LINC01238-205ENST00000567549 CLUL1Q15846 466 aa20.9■□□□□ 0.94
LINC01238-205ENST00000567549 MTERF2Q49AM1 385 aa20.9■□□□□ 0.94
LINC01238-205ENST00000567549 ECHDC2Q86YB7 292 aa20.9■□□□□ 0.94
LINC01238-205ENST00000567549 SMRP1Q8NCR6 262 aa20.9■□□□□ 0.94
LINC01238-205ENST00000567549 MRPS27Q92552 414 aaKnown RBP20.9■□□□□ 0.94
LINC01238-205ENST00000567549 PLXNA4Q9HCM2 1894 aa20.9■□□□□ 0.94
LINC01238-205ENST00000567549 A0A0U1RQF3 1178 aa20.89■□□□□ 0.93
LINC01238-205ENST00000567549 FGFR1P11362 822 aa20.89■□□□□ 0.93
LINC01238-205ENST00000567549 DNAJB1P25685 340 aa20.89■□□□□ 0.93
LINC01238-205ENST00000567549 RAB27AP51159 221 aa20.89■□□□□ 0.93
LINC01238-205ENST00000567549 STK3Q13188 491 aa20.89■□□□□ 0.93
LINC01238-205ENST00000567549 TARBP2Q15633 366 aaKnown RBP20.89■□□□□ 0.93
LINC01238-205ENST00000567549 NEK8Q86SG6 692 aa20.89■□□□□ 0.93
LINC01238-205ENST00000567549 RBM23Q86U06 439 aaKnown RBP20.89■□□□□ 0.93
LINC01238-205ENST00000567549 SLC7A3Q8WY07 619 aa20.89■□□□□ 0.93
LINC01238-205ENST00000567549 MSLNLQ96KJ4 702 aa20.89■□□□□ 0.93
LINC01238-205ENST00000567549 MBOAT7Q96N66 472 aa20.89■□□□□ 0.93
LINC01238-205ENST00000567549 KCNH6Q9H252 994 aa20.89■□□□□ 0.93
LINC01238-205ENST00000567549 ENTPD7Q9NQZ7 604 aa20.89■□□□□ 0.93
LINC01238-205ENST00000567549 SPG21Q9NZD8 308 aa20.89■□□□□ 0.93
LINC01238-205ENST00000567549 FAM86C2PA6NEL3 165 aa20.88■□□□□ 0.93
LINC01238-205ENST00000567549 ADAMTS3O15072 1205 aa20.88■□□□□ 0.93
LINC01238-205ENST00000567549 TBX3O15119 743 aa20.88■□□□□ 0.93
LINC01238-205ENST00000567549 GAS2O43903 313 aaKnown RBP20.88■□□□□ 0.93
LINC01238-205ENST00000567549 BAG4O95429 457 aaKnown RBP20.88■□□□□ 0.93
LINC01238-205ENST00000567549 TDP2O95551 362 aa20.88■□□□□ 0.93
LINC01238-205ENST00000567549 IRS1P35568 1242 aa20.88■□□□□ 0.93
LINC01238-205ENST00000567549 ALDH7A1P49419 539 aaKnown RBP20.88■□□□□ 0.93
LINC01238-205ENST00000567549 ANAPC15P60006 121 aa20.88■□□□□ 0.93
LINC01238-205ENST00000567549 DLX2Q07687 328 aaPredicted RBP20.88■□□□□ 0.93
LINC01238-205ENST00000567549 LETM2Q2VYF4 491 aa20.88■□□□□ 0.93
LINC01238-205ENST00000567549 PPP4R3AQ6IN85 833 aa20.88■□□□□ 0.93
LINC01238-205ENST00000567549 KCNT2Q6UVM3 1135 aa20.88■□□□□ 0.93
LINC01238-205ENST00000567549 RNF169Q8NCN4 708 aa20.88■□□□□ 0.93
LINC01238-205ENST00000567549 KHSRPQ92945 711 aaKnown RBP eCLIP20.88■□□□□ 0.93
LINC01238-205ENST00000567549 STK39Q9UEW8 545 aa20.88■□□□□ 0.93
LINC01238-205ENST00000567549 DDX11L8A8MPP1 907 aa20.87■□□□□ 0.93
LINC01238-205ENST00000567549 RBAK-RBAKDNI3L0D1 243 aa20.87■□□□□ 0.93
LINC01238-205ENST00000567549 LINC01565O15544 149 aa20.87■□□□□ 0.93
LINC01238-205ENST00000567549 GTF2F1P35269 517 aaKnown RBP eCLIP20.87■□□□□ 0.93
LINC01238-205ENST00000567549 QARSP47897 775 aaKnown RBP20.87■□□□□ 0.93
LINC01238-205ENST00000567549 UGCGQ16739 394 aa20.87■□□□□ 0.93
LINC01238-205ENST00000567549 INF2Q27J81 1249 aa20.87■□□□□ 0.93
LINC01238-205ENST00000567549 OTUD6AQ7L8S5 288 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms