RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 CRIPAKQ8N1N5 446 aa13.83□□□□□ -0.2
RNF40-211ENST00000567365 PRPF31Q8WWY3 499 aaKnown RBP13.83□□□□□ -0.2
RNF40-211ENST00000567365 FOXD4L4Q8WXT5 416 aaPredicted RBP13.83□□□□□ -0.2
RNF40-211ENST00000567365 SLC7A3Q8WY07 619 aa13.83□□□□□ -0.2
RNF40-211ENST00000567365 SEPT8Q92599 483 aa13.83□□□□□ -0.2
RNF40-211ENST00000567365 APBB2Q92870 758 aa13.83□□□□□ -0.2
RNF40-211ENST00000567365 OSMRQ99650 979 aa13.83□□□□□ -0.2
RNF40-211ENST00000567365 CCSER1Q9C0I3 900 aa13.83□□□□□ -0.2
RNF40-211ENST00000567365 TMX1Q9H3N1 280 aa13.83□□□□□ -0.2
RNF40-211ENST00000567365 IFT122Q9HBG6 1241 aa13.83□□□□□ -0.2
RNF40-211ENST00000567365 ERVK-5Q9HDB9 667 aa13.83□□□□□ -0.2
RNF40-211ENST00000567365 DDX19AQ9NUU7 478 aaKnown RBP13.83□□□□□ -0.2
RNF40-211ENST00000567365 TFIP11Q9UBB9 837 aaKnown RBP13.83□□□□□ -0.2
RNF40-211ENST00000567365 PADI3Q9ULW8 664 aa13.83□□□□□ -0.2
RNF40-211ENST00000567365 AKT3Q9Y243 479 aa13.83□□□□□ -0.2
RNF40-211ENST00000567365 TRANK1O15050 2925 aa13.83□□□□□ -0.2
RNF40-211ENST00000567365 E9PMD0 336 aa13.82□□□□□ -0.2
RNF40-211ENST00000567365 EFCAB14O75071 495 aa13.82□□□□□ -0.2
RNF40-211ENST00000567365 PPP6R2O75170 966 aa13.82□□□□□ -0.2
RNF40-211ENST00000567365 EYA4O95677 639 aa13.82□□□□□ -0.2
RNF40-211ENST00000567365 DARSP14868 501 aaKnown RBP13.82□□□□□ -0.2
RNF40-211ENST00000567365 CYP11B2P19099 503 aa13.82□□□□□ -0.2
RNF40-211ENST00000567365 DNM2P50570 870 aa13.82□□□□□ -0.2
RNF40-211ENST00000567365 DEFB103AP81534 67 aa13.82□□□□□ -0.2
RNF40-211ENST00000567365 SMAD3P84022 425 aaKnown RBP13.82□□□□□ -0.2
RNF40-211ENST00000567365 CEBPZQ03701 1054 aaKnown RBP13.82□□□□□ -0.2
RNF40-211ENST00000567365 IKBKEQ14164 716 aa13.82□□□□□ -0.2
RNF40-211ENST00000567365 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.82□□□□□ -0.2
RNF40-211ENST00000567365 FAM43BQ6ZT52 329 aaPredicted RBP13.82□□□□□ -0.2
RNF40-211ENST00000567365 RTN4RL1Q86UN2 441 aaPredicted RBP13.82□□□□□ -0.2
RNF40-211ENST00000567365 CABP7Q86V35 215 aa13.82□□□□□ -0.2
RNF40-211ENST00000567365 ZNF410Q86VK4 478 aa13.82□□□□□ -0.2
RNF40-211ENST00000567365 KSR1Q8IVT5 923 aa13.82□□□□□ -0.2
RNF40-211ENST00000567365 PHOSPHO2Q8TCD6 241 aa13.82□□□□□ -0.2
RNF40-211ENST00000567365 TMEM143Q96AN5 459 aa13.82□□□□□ -0.2
RNF40-211ENST00000567365 ZNF396Q96N95 335 aaPredicted RBP13.82□□□□□ -0.2
RNF40-211ENST00000567365 CLIC6Q96NY7 704 aa13.82□□□□□ -0.2
RNF40-211ENST00000567365 CSRNP2Q9H175 543 aa13.82□□□□□ -0.2
RNF40-211ENST00000567365 MTIF3Q9H2K0 278 aaKnown RBP13.82□□□□□ -0.2
RNF40-211ENST00000567365 BHMT2Q9H2M3 363 aa13.82□□□□□ -0.2
RNF40-211ENST00000567365 BLOC1S4Q9NUP1 217 aa13.82□□□□□ -0.2
RNF40-211ENST00000567365 RCOR1Q9UKL0 485 aa13.82□□□□□ -0.2
RNF40-211ENST00000567365 COL4A3BPQ9Y5P4 624 aa13.82□□□□□ -0.2
RNF40-211ENST00000567365 TCHHQ07283 1943 aa13.82□□□□□ -0.2
RNF40-211ENST00000567365 COL4A6Q14031 1691 aa13.82□□□□□ -0.2
RNF40-211ENST00000567365 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.81□□□□□ -0.2
RNF40-211ENST00000567365 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.81□□□□□ -0.2
RNF40-211ENST00000567365 GRXCR1A8MXD5 290 aa13.81□□□□□ -0.2
RNF40-211ENST00000567365 M0QZ92 97 aa13.81□□□□□ -0.2
RNF40-211ENST00000567365 GLRA2P23416 452 aa13.81□□□□□ -0.2
RNF40-211ENST00000567365 DNM1Q05193 864 aaKnown RBP13.81□□□□□ -0.2
RNF40-211ENST00000567365 POU5F1BQ06416 359 aa13.81□□□□□ -0.2
RNF40-211ENST00000567365 LAMTOR4Q0VGL1 99 aa13.81□□□□□ -0.2
RNF40-211ENST00000567365 DSC3Q14574 896 aa13.81□□□□□ -0.2
RNF40-211ENST00000567365 AXDND1Q5T1B0 1012 aaPredicted RBP13.81□□□□□ -0.2
RNF40-211ENST00000567365 PADI6Q6TGC4 694 aa13.81□□□□□ -0.2
RNF40-211ENST00000567365 IFNLR1Q8IU57 520 aaPredicted RBP13.81□□□□□ -0.2
RNF40-211ENST00000567365 RHPN2Q8IUC4 686 aa13.81□□□□□ -0.2
RNF40-211ENST00000567365 ASAP3Q8TDY4 903 aa13.81□□□□□ -0.2
RNF40-211ENST00000567365 TCP11Q8WWU5 503 aa13.81□□□□□ -0.2
RNF40-211ENST00000567365 PSPC1Q8WXF1 523 aaKnown RBP13.81□□□□□ -0.2
RNF40-211ENST00000567365 EPSTI1Q96J88 318 aa13.81□□□□□ -0.2
RNF40-211ENST00000567365 GUCD1Q96NT3 240 aa13.81□□□□□ -0.2
RNF40-211ENST00000567365 PPP1R16BQ96T49 567 aa13.81□□□□□ -0.2
RNF40-211ENST00000567365 SLC9A7Q96T83 725 aa13.81□□□□□ -0.2
RNF40-211ENST00000567365 MTRQ99707 1265 aa13.81□□□□□ -0.2
RNF40-211ENST00000567365 NT5C3AQ9H0P0 336 aa13.81□□□□□ -0.2
RNF40-211ENST00000567365 ATP6V0A4Q9HBG4 840 aa13.81□□□□□ -0.2
RNF40-211ENST00000567365 BMP2KQ9NSY1 1161 aaPredicted RBP13.81□□□□□ -0.2
RNF40-211ENST00000567365 ST3GAL5Q9UNP4 418 aa13.81□□□□□ -0.2
RNF40-211ENST00000567365 DNM3Q9UQ16 869 aa13.81□□□□□ -0.2
RNF40-211ENST00000567365 SLC4A7Q9Y6M7 1214 aa13.81□□□□□ -0.2
RNF40-211ENST00000567365 A0A087WZ62 844 aa13.8□□□□□ -0.2
RNF40-211ENST00000567365 ENPP3O14638 875 aa13.8□□□□□ -0.2
RNF40-211ENST00000567365 SPTLC2O15270 562 aa13.8□□□□□ -0.2
RNF40-211ENST00000567365 ASAP2O43150 1006 aa13.8□□□□□ -0.2
RNF40-211ENST00000567365 MGEA5O60502 916 aa13.8□□□□□ -0.2
RNF40-211ENST00000567365 USO1O60763 962 aaKnown RBP13.8□□□□□ -0.2
RNF40-211ENST00000567365 RPS6KA5O75582 802 aa13.8□□□□□ -0.2
RNF40-211ENST00000567365 UBA7P41226 1012 aa13.8□□□□□ -0.2
RNF40-211ENST00000567365 SLC12A3P55017 1021 aa13.8□□□□□ -0.2
RNF40-211ENST00000567365 MAPK7Q13164 816 aa13.8□□□□□ -0.2
RNF40-211ENST00000567365 KARSQ15046 597 aaKnown RBP13.8□□□□□ -0.2
RNF40-211ENST00000567365 NAALADL2Q58DX5 795 aa13.8□□□□□ -0.2
RNF40-211ENST00000567365 SPECC1Q5M775 1068 aa13.8□□□□□ -0.2
RNF40-211ENST00000567365 C1orf186Q6ZWK4 172 aa13.8□□□□□ -0.2
RNF40-211ENST00000567365 DAW1Q8N136 415 aa13.8□□□□□ -0.2
RNF40-211ENST00000567365 SYT2Q8N9I0 419 aaPredicted RBP13.8□□□□□ -0.2
RNF40-211ENST00000567365 KRI1Q8N9T8 703 aaKnown RBP13.8□□□□□ -0.2
RNF40-211ENST00000567365 MCPH1Q8NEM0 835 aa13.8□□□□□ -0.2
RNF40-211ENST00000567365 SYMPKQ92797 1274 aaKnown RBP13.8□□□□□ -0.2
RNF40-211ENST00000567365 CHAMP1Q96JM3 812 aa13.8□□□□□ -0.2
RNF40-211ENST00000567365 ZNF668Q96K58 619 aaPredicted RBP13.8□□□□□ -0.2
RNF40-211ENST00000567365 FDXACB1Q9BRP7 624 aaPredicted RBP13.8□□□□□ -0.2
RNF40-211ENST00000567365 NFKBIZQ9BYH8 718 aa13.8□□□□□ -0.2
RNF40-211ENST00000567365 TSPYL2Q9H2G4 693 aaPredicted RBP13.8□□□□□ -0.2
RNF40-211ENST00000567365 MINDY3Q9H8M7 445 aa13.8□□□□□ -0.2
RNF40-211ENST00000567365 GPRC5CQ9NQ84 441 aa13.8□□□□□ -0.2
RNF40-211ENST00000567365 GINS2Q9Y248 185 aa13.8□□□□□ -0.2
RNF40-211ENST00000567365 ARHGEF35A5YM69 484 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms