RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 CIITAP33076 1130 aa11.71□□□□□ -0.53
LINC00564-201ENST00000567258 CTNNB1P35222 781 aa11.71□□□□□ -0.53
LINC00564-201ENST00000567258 FOXC1Q12948 553 aa11.71□□□□□ -0.53
LINC00564-201ENST00000567258 NFX1Q12986 1120 aaKnown RBP11.71□□□□□ -0.53
LINC00564-201ENST00000567258 GPM6BQ13491 265 aa11.71□□□□□ -0.53
LINC00564-201ENST00000567258 BTG3Q14201 252 aaPredicted RBP11.71□□□□□ -0.53
LINC00564-201ENST00000567258 ANKRD1Q15327 319 aa11.71□□□□□ -0.53
LINC00564-201ENST00000567258 GALNT17Q6IS24 598 aa11.71□□□□□ -0.53
LINC00564-201ENST00000567258 SPRED2Q7Z698 418 aa11.71□□□□□ -0.53
LINC00564-201ENST00000567258 CCDC60Q8IWA6 550 aaPredicted RBP11.71□□□□□ -0.53
LINC00564-201ENST00000567258 SCUBE3Q8IX30 993 aa11.71□□□□□ -0.53
LINC00564-201ENST00000567258 METTL13Q8N6R0 699 aa11.71□□□□□ -0.53
LINC00564-201ENST00000567258 TEKT3Q9BXF9 490 aa11.71□□□□□ -0.53
LINC00564-201ENST00000567258 OSBPL7Q9BZF2 842 aa11.71□□□□□ -0.53
LINC00564-201ENST00000567258 NRBP2Q9NSY0 501 aa11.71□□□□□ -0.53
LINC00564-201ENST00000567258 PCDHA4Q9UN74 947 aa11.71□□□□□ -0.53
LINC00564-201ENST00000567258 ADGRA3Q8IWK6 1321 aa11.7□□□□□ -0.54
LINC00564-201ENST00000567258 IGSF9BQ9UPX0 1349 aa11.7□□□□□ -0.54
LINC00564-201ENST00000567258 DENND3A2RUS2 1198 aa11.7□□□□□ -0.54
LINC00564-201ENST00000567258 H3BNC9 293 aa11.7□□□□□ -0.54
LINC00564-201ENST00000567258 MAGEB2O15479 319 aa11.7□□□□□ -0.54
LINC00564-201ENST00000567258 DHX15O43143 795 aaKnown RBP11.7□□□□□ -0.54
LINC00564-201ENST00000567258 LPXNO60711 386 aa11.7□□□□□ -0.54
LINC00564-201ENST00000567258 RPS6KA5O75582 802 aa11.7□□□□□ -0.54
LINC00564-201ENST00000567258 IBSPP21815 317 aaPredicted RBP11.7□□□□□ -0.54
LINC00564-201ENST00000567258 SFNP31947 248 aa11.7□□□□□ -0.54
LINC00564-201ENST00000567258 JAK3P52333 1124 aa11.7□□□□□ -0.54
LINC00564-201ENST00000567258 TFF2Q03403 129 aa11.7□□□□□ -0.54
LINC00564-201ENST00000567258 TIGD5Q53EQ6 642 aa11.7□□□□□ -0.54
LINC00564-201ENST00000567258 LCE2AQ5TA79 106 aaPredicted RBP11.7□□□□□ -0.54
LINC00564-201ENST00000567258 LRCH2Q5VUJ6 765 aa11.7□□□□□ -0.54
LINC00564-201ENST00000567258 BLIDQ8IZY5 108 aa11.7□□□□□ -0.54
LINC00564-201ENST00000567258 TBCKQ8TEA7 893 aa11.7□□□□□ -0.54
LINC00564-201ENST00000567258 CRYGNQ8WXF5 182 aa11.7□□□□□ -0.54
LINC00564-201ENST00000567258 ZBTB10Q96DT7 871 aa11.7□□□□□ -0.54
LINC00564-201ENST00000567258 MRPL38Q96DV4 380 aaKnown RBP11.7□□□□□ -0.54
LINC00564-201ENST00000567258 MAP7D2Q96T17 732 aa11.7□□□□□ -0.54
LINC00564-201ENST00000567258 RIT2Q99578 217 aa11.7□□□□□ -0.54
LINC00564-201ENST00000567258 C11orf84Q9BUA3 381 aaPredicted RBP11.7□□□□□ -0.54
LINC00564-201ENST00000567258 DISC1Q9NRI5 854 aa11.7□□□□□ -0.54
LINC00564-201ENST00000567258 GABBR1Q9UBS5 961 aa11.7□□□□□ -0.54
LINC00564-201ENST00000567258 PADI3Q9ULW8 664 aa11.7□□□□□ -0.54
LINC00564-201ENST00000567258 MAFBQ9Y5Q3 323 aaPredicted RBP11.7□□□□□ -0.54
LINC00564-201ENST00000567258 COL4A6Q14031 1691 aa11.7□□□□□ -0.54
LINC00564-201ENST00000567258 KIAA1671Q9BY89 1806 aa11.7□□□□□ -0.54
LINC00564-201ENST00000567258 KDM3AQ9Y4C1 1321 aa11.69□□□□□ -0.54
LINC00564-201ENST00000567258 CCDC194A0A1B0GVG4 234 aa11.69□□□□□ -0.54
LINC00564-201ENST00000567258 GPR182O15218 404 aa11.69□□□□□ -0.54
LINC00564-201ENST00000567258 CHMP2AO43633 222 aa11.69□□□□□ -0.54
LINC00564-201ENST00000567258 MARCH6O60337 910 aa11.69□□□□□ -0.54
LINC00564-201ENST00000567258 RB1P06400 928 aa11.69□□□□□ -0.54
LINC00564-201ENST00000567258 CENPBP07199 599 aaPredicted RBP11.69□□□□□ -0.54
LINC00564-201ENST00000567258 NONOQ15233 471 aaKnown RBP eCLIP11.69□□□□□ -0.54
LINC00564-201ENST00000567258 EP400NLQ6ZTU2 488 aa11.69□□□□□ -0.54
LINC00564-201ENST00000567258 KRT25Q7Z3Z0 450 aa11.69□□□□□ -0.54
LINC00564-201ENST00000567258 NPAS4Q8IUM7 802 aa11.69□□□□□ -0.54
LINC00564-201ENST00000567258 WASF1Q92558 559 aa11.69□□□□□ -0.54
LINC00564-201ENST00000567258 SCLT1Q96NL6 688 aa11.69□□□□□ -0.54
LINC00564-201ENST00000567258 AGO3Q9H9G7 860 aaKnown RBP11.69□□□□□ -0.54
LINC00564-201ENST00000567258 RTN4Q9NQC3 1192 aaKnown RBP11.69□□□□□ -0.54
LINC00564-201ENST00000567258 AKT3Q9Y243 479 aa11.69□□□□□ -0.54
LINC00564-201ENST00000567258 PCDHB7Q9Y5E2 793 aa11.69□□□□□ -0.54
LINC00564-201ENST00000567258 BRWD1Q9NSI6 2320 aa11.69□□□□□ -0.54
LINC00564-201ENST00000567258 FNDC1Q4ZHG4 1894 aaPredicted RBP11.68□□□□□ -0.54
LINC00564-201ENST00000567258 MSH4O15457 936 aa11.68□□□□□ -0.54
LINC00564-201ENST00000567258 BMPR1AP36894 532 aa11.68□□□□□ -0.54
LINC00564-201ENST00000567258 KCNQ1P51787 676 aa11.68□□□□□ -0.54
LINC00564-201ENST00000567258 CRYBB1P53674 252 aaPredicted RBP11.68□□□□□ -0.54
LINC00564-201ENST00000567258 ANAPC15P60006 121 aa11.68□□□□□ -0.54
LINC00564-201ENST00000567258 TMEM266Q2M3C6 531 aa11.68□□□□□ -0.54
LINC00564-201ENST00000567258 SPOUT1Q5T280 376 aaKnown RBP11.68□□□□□ -0.54
LINC00564-201ENST00000567258 MIER3Q7Z3K6 550 aa11.68□□□□□ -0.54
LINC00564-201ENST00000567258 KIAA0319LQ8IZA0 1049 aa11.68□□□□□ -0.54
LINC00564-201ENST00000567258 BANK1Q8NDB2 785 aa11.68□□□□□ -0.54
LINC00564-201ENST00000567258 PPP2R3CQ969Q6 453 aa11.68□□□□□ -0.54
LINC00564-201ENST00000567258 NAP1L4Q99733 375 aaKnown RBP11.68□□□□□ -0.54
LINC00564-201ENST00000567258 BRMS1Q9HCU9 246 aa11.68□□□□□ -0.54
LINC00564-201ENST00000567258 C1orf112Q9NSG2 853 aa11.68□□□□□ -0.54
LINC00564-201ENST00000567258 TTC28Q96AY4 2481 aa11.67□□□□□ -0.54
LINC00564-201ENST00000567258 ADAMTS3O15072 1205 aa11.67□□□□□ -0.54
LINC00564-201ENST00000567258 NCK2O43639 380 aa11.67□□□□□ -0.54
LINC00564-201ENST00000567258 DGKIO75912 1065 aa11.67□□□□□ -0.54
LINC00564-201ENST00000567258 OATP04181 439 aa11.67□□□□□ -0.54
LINC00564-201ENST00000567258 BMP1P13497 986 aa11.67□□□□□ -0.54
LINC00564-201ENST00000567258 ZSCAN20P17040 1043 aaPredicted RBP11.67□□□□□ -0.54
LINC00564-201ENST00000567258 DNM2P50570 870 aa11.67□□□□□ -0.54
LINC00564-201ENST00000567258 TBC1D8BQ0IIM8 1120 aa11.67□□□□□ -0.54
LINC00564-201ENST00000567258 KIZQ2M2Z5 673 aa11.67□□□□□ -0.54
LINC00564-201ENST00000567258 PUS10Q3MIT2 529 aaKnown RBP11.67□□□□□ -0.54
LINC00564-201ENST00000567258 Q4G0T1 1027 aa11.67□□□□□ -0.54
LINC00564-201ENST00000567258 EFCAB12Q6NXP0 572 aa11.67□□□□□ -0.54
LINC00564-201ENST00000567258 CMTR2Q8IYT2 770 aaKnown RBP11.67□□□□□ -0.54
LINC00564-201ENST00000567258 DAGLBQ8NCG7 672 aa11.67□□□□□ -0.54
LINC00564-201ENST00000567258 RDM1Q8NG50 284 aa11.67□□□□□ -0.54
LINC00564-201ENST00000567258 SLC5A5Q92911 643 aa11.67□□□□□ -0.54
LINC00564-201ENST00000567258 PPP1R16BQ96T49 567 aa11.67□□□□□ -0.54
LINC00564-201ENST00000567258 SPSB2Q99619 263 aa11.67□□□□□ -0.54
LINC00564-201ENST00000567258 PLVAPQ9BX97 442 aa11.67□□□□□ -0.54
LINC00564-201ENST00000567258 LMAN2LQ9H0V9 348 aa11.67□□□□□ -0.54
LINC00564-201ENST00000567258 NSUN3Q9H649 340 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms