RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 FIGNQ5HY92 759 aa7.04□□□□□ -1.28
GINS3-206ENST00000567143 MEI1Q5TIA1 1274 aa7.04□□□□□ -1.28
GINS3-206ENST00000567143 CCDC121Q6ZUS5 278 aa7.04□□□□□ -1.28
GINS3-206ENST00000567143 C16orf86Q6ZW13 317 aa7.04□□□□□ -1.28
GINS3-206ENST00000567143 CATSPER3Q86XQ3 398 aa7.04□□□□□ -1.28
GINS3-206ENST00000567143 DAGLBQ8NCG7 672 aa7.04□□□□□ -1.28
GINS3-206ENST00000567143 JDP2Q8WYK2 163 aa7.04□□□□□ -1.28
GINS3-206ENST00000567143 FAM118BQ9BPY3 351 aa7.04□□□□□ -1.28
GINS3-206ENST00000567143 HAUS2Q9NVX0 235 aa7.04□□□□□ -1.28
GINS3-206ENST00000567143 NAGPAQ9UK23 515 aa7.04□□□□□ -1.28
GINS3-206ENST00000567143 SERPINA10Q9UK55 444 aa7.04□□□□□ -1.28
GINS3-206ENST00000567143 PNMA2Q9UL42 364 aa7.04□□□□□ -1.28
GINS3-206ENST00000567143 DAGLAQ9Y4D2 1042 aa7.04□□□□□ -1.28
GINS3-206ENST00000567143 GAKO14976 1311 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 HNRNPH3P31942 346 aaKnown RBP7.03□□□□□ -1.28
GINS3-206ENST00000567143 MRPL12P52815 198 aaKnown RBP7.03□□□□□ -1.28
GINS3-206ENST00000567143 TRIP13Q15645 432 aaPredicted RBP7.03□□□□□ -1.28
GINS3-206ENST00000567143 TRIM59Q8IWR1 403 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 MYCT1Q8N699 235 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 CYFIP2Q96F07 1278 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 BTBD6Q96KE9 485 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 RUSC1Q9BVN2 902 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 ZC3H12CQ9C0D7 883 aaKnown RBP7.03□□□□□ -1.28
GINS3-206ENST00000567143 EPN3Q9H201 632 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.03□□□□□ -1.28
GINS3-206ENST00000567143 CDK5RAP2Q96SN8 1893 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 IGSF9BQ9UPX0 1349 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 PGRMC1O00264 195 aaKnown RBP7.03□□□□□ -1.28
GINS3-206ENST00000567143 TBCAO75347 108 aaKnown RBP7.03□□□□□ -1.28
GINS3-206ENST00000567143 CFBP00751 764 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 H2AFZP0C0S5 128 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 PON1P27169 355 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 KCNJ1P48048 391 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 MARCKSL1P49006 195 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 CDR1P51861 262 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 RHBDL3P58872 404 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 CDK17Q00537 523 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 MAP3K10Q02779 954 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 ZNF844Q08AG5 666 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 C2CD6Q53TS8 623 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 FAM133BQ5BKY9 247 aaKnown RBP7.03□□□□□ -1.28
GINS3-206ENST00000567143 MCTP2Q6DN12 878 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 HHIPL2Q6UWX4 724 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 NSMFQ6X4W1 530 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 GBP6Q6ZN66 633 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 H2AFVQ71UI9 128 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 CCDC13Q8IYE1 715 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 LARGE2Q8N3Y3 721 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 MRRFQ96E11 262 aaKnown RBP7.03□□□□□ -1.28
GINS3-206ENST00000567143 P2RX7Q99572 595 aaKnown RBP7.03□□□□□ -1.28
GINS3-206ENST00000567143 DBNDD1Q9H9R9 158 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 MAGEF1Q9HAY2 307 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 GDF3Q9NR23 364 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 SERPINB13Q9UIV8 391 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 HACL1Q9UJ83 578 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 PPP1R9AQ9ULJ8 1098 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 SSU72P8A0A1W2PR75 194 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 CTNND1O60716 968 aaKnown RBP7.03□□□□□ -1.28
GINS3-206ENST00000567143 AFPP02771 609 aaKnown RBP7.03□□□□□ -1.28
GINS3-206ENST00000567143 VIMP08670 466 aaKnown RBP7.03□□□□□ -1.28
GINS3-206ENST00000567143 FGFR4P22455 802 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 GUCY2CP25092 1073 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 CDC25CP30307 473 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 RDXP35241 583 aaKnown RBP7.03□□□□□ -1.28
GINS3-206ENST00000567143 FXR2P51116 673 aaKnown RBP eCLIP7.03□□□□□ -1.28
GINS3-206ENST00000567143 GALCP54803 685 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 SETQ01105 290 aaPredicted RBP7.03□□□□□ -1.28
GINS3-206ENST00000567143 B4GALNT4Q76KP1 1039 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 LBHD1Q9BQE6 289 aaPredicted RBP7.03□□□□□ -1.28
GINS3-206ENST00000567143 LZTS2Q9BRK4 669 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 ANO3Q9BYT9 981 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 DHX36Q9H2U1 1008 aaKnown RBP7.03□□□□□ -1.28
GINS3-206ENST00000567143 RIC8AQ9NPQ8 531 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 DNM3Q9UQ16 869 aa7.03□□□□□ -1.28
GINS3-206ENST00000567143 PNMA6FA0A0J9YX94 578 aa7.02□□□□□ -1.29
GINS3-206ENST00000567143 DDX3XO00571 662 aaKnown RBP eCLIP7.02□□□□□ -1.29
GINS3-206ENST00000567143 EVI5O60447 810 aa7.02□□□□□ -1.29
GINS3-206ENST00000567143 CAND2O75155 1236 aa7.02□□□□□ -1.29
GINS3-206ENST00000567143 TTLL1O95922 423 aa7.02□□□□□ -1.29
GINS3-206ENST00000567143 ITGBL1O95965 494 aaPredicted RBP7.02□□□□□ -1.29
GINS3-206ENST00000567143 NR3C1P04150 777 aa7.02□□□□□ -1.29
GINS3-206ENST00000567143 SSTR3P32745 418 aaPredicted RBP7.02□□□□□ -1.29
GINS3-206ENST00000567143 GJC1P36383 396 aa7.02□□□□□ -1.29
GINS3-206ENST00000567143 ZNF543Q08ER8 600 aa7.02□□□□□ -1.29
GINS3-206ENST00000567143 ITGB3BPQ13352 177 aaPredicted RBP7.02□□□□□ -1.29
GINS3-206ENST00000567143 SNX1Q13596 522 aa7.02□□□□□ -1.29
GINS3-206ENST00000567143 SEPT2Q15019 361 aa7.02□□□□□ -1.29
GINS3-206ENST00000567143 ZKSCAN8Q15776 578 aaPredicted RBP7.02□□□□□ -1.29
GINS3-206ENST00000567143 ZCWPW2Q504Y3 356 aa7.02□□□□□ -1.29
GINS3-206ENST00000567143 FAM182AQ5T1J6 154 aa7.02□□□□□ -1.29
GINS3-206ENST00000567143 IRF2BP2Q7Z5L9 587 aa7.02□□□□□ -1.29
GINS3-206ENST00000567143 RNF10Q8N5U6 811 aaKnown RBP7.02□□□□□ -1.29
GINS3-206ENST00000567143 MSL3Q8N5Y2 521 aaKnown RBP7.02□□□□□ -1.29
GINS3-206ENST00000567143 TCP11Q8WWU5 503 aa7.02□□□□□ -1.29
GINS3-206ENST00000567143 CAVIN3Q969G5 261 aa7.02□□□□□ -1.29
GINS3-206ENST00000567143 ARHGEF26Q96DR7 871 aa7.02□□□□□ -1.29
GINS3-206ENST00000567143 FAM212AQ96EL1 285 aa7.02□□□□□ -1.29
GINS3-206ENST00000567143 ERVK-5Q9HDB9 667 aa7.02□□□□□ -1.29
GINS3-206ENST00000567143 BAIAP2L1Q9UHR4 511 aa7.02□□□□□ -1.29
GINS3-206ENST00000567143 FAM86B1E9PN63 330 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms