RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 GRB10Q13322 594 aa21.59■■□□□ 1.05
CCDC113-204ENST00000566498 ORC2Q13416 577 aaPredicted RBP21.59■■□□□ 1.05
CCDC113-204ENST00000566498 BTG3Q14201 252 aaPredicted RBP21.59■■□□□ 1.05
CCDC113-204ENST00000566498 NPAS4Q8IUM7 802 aa21.59■■□□□ 1.05
CCDC113-204ENST00000566498 FBXO22Q8NEZ5 403 aa21.59■■□□□ 1.05
CCDC113-204ENST00000566498 NEK9Q8TD19 979 aa21.59■■□□□ 1.05
CCDC113-204ENST00000566498 RNF216Q9NWF9 866 aaPredicted RBP21.59■■□□□ 1.05
CCDC113-204ENST00000566498 PPME1Q9Y570 386 aa21.59■■□□□ 1.05
CCDC113-204ENST00000566498 TTC3P53804 2025 aa21.58■■□□□ 1.05
CCDC113-204ENST00000566498 EYSQ5T1H1 3165 aa21.58■■□□□ 1.05
CCDC113-204ENST00000566498 POTEMA6NI47 508 aa21.58■■□□□ 1.05
CCDC113-204ENST00000566498 CSDE1O75534 798 aaKnown RBP21.58■■□□□ 1.05
CCDC113-204ENST00000566498 DGKIO75912 1065 aa21.58■■□□□ 1.05
CCDC113-204ENST00000566498 DARSP14868 501 aaKnown RBP21.58■■□□□ 1.05
CCDC113-204ENST00000566498 RFC5P40937 340 aa21.58■■□□□ 1.05
CCDC113-204ENST00000566498 NBR1Q14596 966 aa21.58■■□□□ 1.05
CCDC113-204ENST00000566498 LARP1BQ659C4 914 aaKnown RBP21.58■■□□□ 1.05
CCDC113-204ENST00000566498 SLC24A5Q71RS6 500 aa21.58■■□□□ 1.05
CCDC113-204ENST00000566498 KSR1Q8IVT5 923 aa21.58■■□□□ 1.05
CCDC113-204ENST00000566498 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.58■■□□□ 1.05
CCDC113-204ENST00000566498 TMEM143Q96AN5 459 aa21.58■■□□□ 1.05
CCDC113-204ENST00000566498 CCDC43Q96MW1 224 aaKnown RBP21.58■■□□□ 1.05
CCDC113-204ENST00000566498 RGS18Q9NS28 235 aa21.58■■□□□ 1.05
CCDC113-204ENST00000566498 C1orf112Q9NSG2 853 aa21.58■■□□□ 1.05
CCDC113-204ENST00000566498 BMP2KQ9NSY1 1161 aaPredicted RBP21.58■■□□□ 1.05
CCDC113-204ENST00000566498 MTCH2Q9Y6C9 303 aa21.58■■□□□ 1.05
CCDC113-204ENST00000566498 A0A087WWV3 80 aa21.57■■□□□ 1.04
CCDC113-204ENST00000566498 A0A087WZ62 844 aa21.57■■□□□ 1.04
CCDC113-204ENST00000566498 FGFR4P22455 802 aa21.57■■□□□ 1.04
CCDC113-204ENST00000566498 SARSP49591 514 aaKnown RBP21.57■■□□□ 1.04
CCDC113-204ENST00000566498 EPC2Q52LR7 807 aa21.57■■□□□ 1.04
CCDC113-204ENST00000566498 TMEM192Q8IY95 271 aa21.57■■□□□ 1.04
CCDC113-204ENST00000566498 ERMNQ8TAM6 284 aa21.57■■□□□ 1.04
CCDC113-204ENST00000566498 GDPD5Q8WTR4 605 aa21.57■■□□□ 1.04
CCDC113-204ENST00000566498 NLRP4Q96MN2 994 aa21.57■■□□□ 1.04
CCDC113-204ENST00000566498 SAMD11Q96NU1 681 aa21.57■■□□□ 1.04
CCDC113-204ENST00000566498 FDXACB1Q9BRP7 624 aaPredicted RBP21.57■■□□□ 1.04
CCDC113-204ENST00000566498 DHX33Q9H6R0 707 aaKnown RBP21.57■■□□□ 1.04
CCDC113-204ENST00000566498 SRGAP2CP0DJJ0 459 aa21.56■■□□□ 1.04
CCDC113-204ENST00000566498 POU3F3P20264 500 aaPredicted RBP21.56■■□□□ 1.04
CCDC113-204ENST00000566498 TOB1P50616 345 aaPredicted RBP21.56■■□□□ 1.04
CCDC113-204ENST00000566498 SKIV2LQ15477 1246 aaKnown RBP21.56■■□□□ 1.04
CCDC113-204ENST00000566498 PAN2Q504Q3 1202 aaKnown RBP21.56■■□□□ 1.04
CCDC113-204ENST00000566498 PIGOQ8TEQ8 1089 aa21.56■■□□□ 1.04
CCDC113-204ENST00000566498 TCP11Q8WWU5 503 aa21.56■■□□□ 1.04
CCDC113-204ENST00000566498 PRPF31Q8WWY3 499 aaKnown RBP21.56■■□□□ 1.04
CCDC113-204ENST00000566498 PSPC1Q8WXF1 523 aaKnown RBP21.56■■□□□ 1.04
CCDC113-204ENST00000566498 ZNF689Q96CS4 500 aaPredicted RBP21.56■■□□□ 1.04
CCDC113-204ENST00000566498 INO80BQ9C086 356 aaPredicted RBP21.56■■□□□ 1.04
CCDC113-204ENST00000566498 ANKEF1Q9NU02 776 aa21.56■■□□□ 1.04
CCDC113-204ENST00000566498 PCDHB6Q9Y5E3 794 aa21.56■■□□□ 1.04
CCDC113-204ENST00000566498 LPXNO60711 386 aa21.55■■□□□ 1.04
CCDC113-204ENST00000566498 LYPLA2O95372 231 aa21.55■■□□□ 1.04
CCDC113-204ENST00000566498 PTGDRQ13258 359 aa21.55■■□□□ 1.04
CCDC113-204ENST00000566498 EMC2Q15006 297 aa21.55■■□□□ 1.04
CCDC113-204ENST00000566498 ZNF410Q86VK4 478 aa21.55■■□□□ 1.04
CCDC113-204ENST00000566498 CATSPER3Q86XQ3 398 aa21.55■■□□□ 1.04
CCDC113-204ENST00000566498 CRIPAKQ8N1N5 446 aa21.55■■□□□ 1.04
CCDC113-204ENST00000566498 MTRQ99707 1265 aa21.55■■□□□ 1.04
CCDC113-204ENST00000566498 COL4A3BPQ9Y5P4 624 aa21.55■■□□□ 1.04
CCDC113-204ENST00000566498 ADGRA3Q8IWK6 1321 aa21.55■■□□□ 1.04
CCDC113-204ENST00000566498 C9IYK1 514 aa21.54■■□□□ 1.04
CCDC113-204ENST00000566498 SPATA31C1P0DKV0 1188 aa21.54■■□□□ 1.04
CCDC113-204ENST00000566498 XRCC6P12956 609 aaKnown RBP eCLIP21.54■■□□□ 1.04
CCDC113-204ENST00000566498 GPM6BQ13491 265 aa21.54■■□□□ 1.04
CCDC113-204ENST00000566498 DSC3Q14574 896 aa21.54■■□□□ 1.04
CCDC113-204ENST00000566498 C4orf32Q8N8J7 132 aa21.54■■□□□ 1.04
CCDC113-204ENST00000566498 ATP6V0A4Q9HBG4 840 aa21.54■■□□□ 1.04
CCDC113-204ENST00000566498 TUFT1Q9NNX1 390 aa21.54■■□□□ 1.04
CCDC113-204ENST00000566498 ASAP2O43150 1006 aa21.53■■□□□ 1.04
CCDC113-204ENST00000566498 GAS2O43903 313 aaKnown RBP21.53■■□□□ 1.04
CCDC113-204ENST00000566498 MED24O75448 989 aa21.53■■□□□ 1.04
CCDC113-204ENST00000566498 SFPQP23246 707 aaKnown RBP eCLIP21.53■■□□□ 1.04
CCDC113-204ENST00000566498 CTNNB1P35222 781 aa21.53■■□□□ 1.04
CCDC113-204ENST00000566498 BMPR1AP36894 532 aa21.53■■□□□ 1.04
CCDC113-204ENST00000566498 GATMP50440 423 aa21.53■■□□□ 1.04
CCDC113-204ENST00000566498 FAM189BP81408 668 aa21.53■■□□□ 1.04
CCDC113-204ENST00000566498 LAMTOR4Q0VGL1 99 aa21.53■■□□□ 1.04
CCDC113-204ENST00000566498 FAM102BQ5T8I3 360 aa21.53■■□□□ 1.04
CCDC113-204ENST00000566498 NACC1Q96RE7 527 aa21.53■■□□□ 1.04
CCDC113-204ENST00000566498 POLR3CQ9BUI4 534 aaPredicted RBP21.53■■□□□ 1.04
CCDC113-204ENST00000566498 LMCD1Q9NZU5 365 aa21.53■■□□□ 1.04
CCDC113-204ENST00000566498 LRWD1Q9UFC0 647 aa21.53■■□□□ 1.04
CCDC113-204ENST00000566498 RWDD3Q9Y3V2 267 aa21.53■■□□□ 1.04
CCDC113-204ENST00000566498 TRANK1O15050 2925 aa21.52■■□□□ 1.04
CCDC113-204ENST00000566498 DGAT1O75907 488 aa21.52■■□□□ 1.04
CCDC113-204ENST00000566498 RPA1P27694 616 aa21.52■■□□□ 1.04
CCDC113-204ENST00000566498 RARRES1P49788 294 aa21.52■■□□□ 1.04
CCDC113-204ENST00000566498 RILPL1Q5EBL4 403 aa21.52■■□□□ 1.04
CCDC113-204ENST00000566498 CATSPER4Q7RTX7 472 aa21.52■■□□□ 1.04
CCDC113-204ENST00000566498 CMTR2Q8IYT2 770 aaKnown RBP21.52■■□□□ 1.04
CCDC113-204ENST00000566498 RNF169Q8NCN4 708 aa21.52■■□□□ 1.04
CCDC113-204ENST00000566498 RAB34Q9BZG1 259 aa21.52■■□□□ 1.04
CCDC113-204ENST00000566498 RC3H2Q9HBD1 1191 aaKnown RBP21.52■■□□□ 1.04
CCDC113-204ENST00000566498 PRDM6Q9NQX0 595 aa21.52■■□□□ 1.04
CCDC113-204ENST00000566498 TMEM161AQ9NX61 479 aa21.52■■□□□ 1.04
CCDC113-204ENST00000566498 DACT1Q9NYF0 836 aa21.52■■□□□ 1.04
CCDC113-204ENST00000566498 PRUNE2Q8WUY3 3088 aa21.52■■□□□ 1.04
CCDC113-204ENST00000566498 TBKBP1A7MCY6 615 aa21.51■■□□□ 1.03
CCDC113-204ENST00000566498 H3BNC9 293 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms