RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 CSTF1Q05048 431 aaKnown RBP19.1■□□□□ 0.65
CLK3-217ENST00000566126 ABI1Q8IZP0 508 aa19.1■□□□□ 0.65
CLK3-217ENST00000566126 NETO1Q8TDF5 533 aa19.1■□□□□ 0.65
CLK3-217ENST00000566126 NELL1Q92832 810 aa19.1■□□□□ 0.65
CLK3-217ENST00000566126 FAM227BQ96M60 508 aa19.1■□□□□ 0.65
CLK3-217ENST00000566126 MYADMQ96S97 322 aa19.1■□□□□ 0.65
CLK3-217ENST00000566126 DCTPP1Q9H773 170 aa19.1■□□□□ 0.65
CLK3-217ENST00000566126 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.1■□□□□ 0.65
CLK3-217ENST00000566126 MS4A1P11836 297 aa19.09■□□□□ 0.65
CLK3-217ENST00000566126 PMLP29590 882 aa19.09■□□□□ 0.65
CLK3-217ENST00000566126 GIT2Q14161 759 aa19.09■□□□□ 0.65
CLK3-217ENST00000566126 WTAPQ15007 396 aa19.09■□□□□ 0.65
CLK3-217ENST00000566126 ZNF589Q86UQ0 364 aaPredicted RBP19.09■□□□□ 0.65
CLK3-217ENST00000566126 PPFIBP1Q86W92 1011 aa19.09■□□□□ 0.65
CLK3-217ENST00000566126 KIAA0319LQ8IZA0 1049 aa19.09■□□□□ 0.65
CLK3-217ENST00000566126 NXPE3Q969Y0 559 aa19.09■□□□□ 0.65
CLK3-217ENST00000566126 GPRASP2Q96D09 838 aa19.09■□□□□ 0.65
CLK3-217ENST00000566126 TMEM169Q96HH4 297 aa19.09■□□□□ 0.65
CLK3-217ENST00000566126 SLC2A4RGQ9NR83 387 aa19.09■□□□□ 0.65
CLK3-217ENST00000566126 ZSCAN32Q9NX65 697 aa19.09■□□□□ 0.65
CLK3-217ENST00000566126 PKD2L1Q9P0L9 805 aa19.09■□□□□ 0.65
CLK3-217ENST00000566126 PALM3A6NDB9 673 aaPredicted RBP19.08■□□□□ 0.64
CLK3-217ENST00000566126 ITGB5P18084 799 aa19.08■□□□□ 0.64
CLK3-217ENST00000566126 KLRC1P26715 233 aa19.08■□□□□ 0.64
CLK3-217ENST00000566126 CLCN4P51793 760 aa19.08■□□□□ 0.64
CLK3-217ENST00000566126 ECHDC2Q86YB7 292 aa19.08■□□□□ 0.64
CLK3-217ENST00000566126 OSMRQ99650 979 aa19.08■□□□□ 0.64
CLK3-217ENST00000566126 WDR6Q9NNW5 1121 aaKnown RBP19.08■□□□□ 0.64
CLK3-217ENST00000566126 SPDYE4A6NLX3 237 aa19.07■□□□□ 0.64
CLK3-217ENST00000566126 B4E1Z4 1266 aa19.07■□□□□ 0.64
CLK3-217ENST00000566126 TBC1D4O60343 1298 aa19.07■□□□□ 0.64
CLK3-217ENST00000566126 ALDH7A1P49419 539 aaKnown RBP19.07■□□□□ 0.64
CLK3-217ENST00000566126 POLGP54098 1239 aaPredicted RBP19.07■□□□□ 0.64
CLK3-217ENST00000566126 SPEM2Q0P670 501 aa19.07■□□□□ 0.64
CLK3-217ENST00000566126 TRAF1Q13077 416 aa19.07■□□□□ 0.64
CLK3-217ENST00000566126 MCMDC2Q4G0Z9 681 aa19.07■□□□□ 0.64
CLK3-217ENST00000566126 DDX53Q86TM3 631 aaKnown RBP19.07■□□□□ 0.64
CLK3-217ENST00000566126 HELQQ8TDG4 1101 aa19.07■□□□□ 0.64
CLK3-217ENST00000566126 BCL7CQ8WUZ0 217 aaPredicted RBP19.07■□□□□ 0.64
CLK3-217ENST00000566126 TNPO1Q92973 898 aaKnown RBP19.07■□□□□ 0.64
CLK3-217ENST00000566126 PPP1R16BQ96T49 567 aa19.07■□□□□ 0.64
CLK3-217ENST00000566126 BCO2Q9BYV7 579 aa19.07■□□□□ 0.64
CLK3-217ENST00000566126 RIOX1Q9H6W3 641 aa19.07■□□□□ 0.64
CLK3-217ENST00000566126 GMEB2Q9UKD1 530 aa19.07■□□□□ 0.64
CLK3-217ENST00000566126 MYH15Q9Y2K3 1946 aa19.07■□□□□ 0.64
CLK3-217ENST00000566126 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.06■□□□□ 0.64
CLK3-217ENST00000566126 CYTH3O43739 400 aa19.06■□□□□ 0.64
CLK3-217ENST00000566126 SHC2P98077 582 aa19.06■□□□□ 0.64
CLK3-217ENST00000566126 KIZQ2M2Z5 673 aa19.06■□□□□ 0.64
CLK3-217ENST00000566126 USP17L6PQ6QN14 398 aa19.06■□□□□ 0.64
CLK3-217ENST00000566126 CDHR1Q96JP9 859 aa19.06■□□□□ 0.64
CLK3-217ENST00000566126 VN1R3Q9BXE9 311 aa19.06■□□□□ 0.64
CLK3-217ENST00000566126 AZI2Q9H6S1 392 aa19.06■□□□□ 0.64
CLK3-217ENST00000566126 ZSWIM5Q9P217 1185 aa19.06■□□□□ 0.64
CLK3-217ENST00000566126 MTF2Q9Y483 593 aaPredicted RBP19.06■□□□□ 0.64
CLK3-217ENST00000566126 CLUHO75153 1309 aa19.05■□□□□ 0.64
CLK3-217ENST00000566126 PROS1P07225 676 aa19.05■□□□□ 0.64
CLK3-217ENST00000566126 NT5C2P49902 561 aa19.05■□□□□ 0.64
CLK3-217ENST00000566126 CRYBB1P53674 252 aaPredicted RBP19.05■□□□□ 0.64
CLK3-217ENST00000566126 PLPPR4Q7Z2D5 763 aa19.05■□□□□ 0.64
CLK3-217ENST00000566126 ZNF598Q86UK7 904 aaKnown RBP19.05■□□□□ 0.64
CLK3-217ENST00000566126 RNF169Q8NCN4 708 aa19.05■□□□□ 0.64
CLK3-217ENST00000566126 ST13P5Q8NFI4 369 aaPredicted RBP19.05■□□□□ 0.64
CLK3-217ENST00000566126 CMASQ8NFW8 434 aaPredicted RBP19.05■□□□□ 0.64
CLK3-217ENST00000566126 IGSF21Q96ID5 467 aa19.05■□□□□ 0.64
CLK3-217ENST00000566126 KLHL5Q96PQ7 755 aa19.05■□□□□ 0.64
CLK3-217ENST00000566126 DDX23Q9BUQ8 820 aaKnown RBP19.05■□□□□ 0.64
CLK3-217ENST00000566126 PNMA6FA0A0J9YX94 578 aa19.04■□□□□ 0.64
CLK3-217ENST00000566126 KANSL1LA0AUZ9 987 aa19.04■□□□□ 0.64
CLK3-217ENST00000566126 ANHXE9PGG2 379 aa19.04■□□□□ 0.64
CLK3-217ENST00000566126 MEIS2O14770 477 aa19.04■□□□□ 0.64
CLK3-217ENST00000566126 GPR32O75388 356 aa19.04■□□□□ 0.64
CLK3-217ENST00000566126 KLRC2P26717 231 aa19.04■□□□□ 0.64
CLK3-217ENST00000566126 HTR4Q13639 388 aa19.04■□□□□ 0.64
CLK3-217ENST00000566126 TSSK4Q6SA08 328 aa19.04■□□□□ 0.64
CLK3-217ENST00000566126 STAMQ92783 540 aa19.04■□□□□ 0.64
CLK3-217ENST00000566126 SHDQ96IW2 340 aa19.04■□□□□ 0.64
CLK3-217ENST00000566126 CHMP4BQ9H444 224 aaKnown RBP19.04■□□□□ 0.64
CLK3-217ENST00000566126 JPH1Q9HDC5 661 aaPredicted RBP19.04■□□□□ 0.64
CLK3-217ENST00000566126 CNPP09543 421 aaKnown RBP19.03■□□□□ 0.64
CLK3-217ENST00000566126 STAT5BP51692 787 aa19.03■□□□□ 0.64
CLK3-217ENST00000566126 MTMR1Q13613 665 aa19.03■□□□□ 0.64
CLK3-217ENST00000566126 N4BP2L1Q5TBK1 243 aaPredicted RBP19.03■□□□□ 0.64
CLK3-217ENST00000566126 SMARCC2Q8TAQ2 1214 aa19.03■□□□□ 0.64
CLK3-217ENST00000566126 MRPL9Q9BYD2 267 aaKnown RBP19.03■□□□□ 0.64
CLK3-217ENST00000566126 RHOBTB2Q9BYZ6 727 aa19.03■□□□□ 0.64
CLK3-217ENST00000566126 UBIAD1Q9Y5Z9 338 aa19.03■□□□□ 0.64
CLK3-217ENST00000566126 RALGAPA1Q6GYQ0 2036 aa19.03■□□□□ 0.64
CLK3-217ENST00000566126 CCDC195A0A1B0GUA6 201 aa19.02■□□□□ 0.64
CLK3-217ENST00000566126 ZNF213O14771 459 aa19.02■□□□□ 0.64
CLK3-217ENST00000566126 LILRB3O75022 631 aa19.02■□□□□ 0.64
CLK3-217ENST00000566126 ZC3H11AO75152 810 aaKnown RBP eCLIP19.02■□□□□ 0.64
CLK3-217ENST00000566126 LAMP2P13473 410 aa19.02■□□□□ 0.64
CLK3-217ENST00000566126 MX1P20591 662 aa19.02■□□□□ 0.64
CLK3-217ENST00000566126 KCNA4P22459 653 aa19.02■□□□□ 0.64
CLK3-217ENST00000566126 SNW1Q13573 536 aaKnown RBP19.02■□□□□ 0.64
CLK3-217ENST00000566126 IFIT1BQ5T764 474 aaKnown RBP19.02■□□□□ 0.64
CLK3-217ENST00000566126 BBXQ8WY36 941 aaPredicted RBP19.02■□□□□ 0.64
CLK3-217ENST00000566126 EVI5LQ96CN4 794 aa19.02■□□□□ 0.64
CLK3-217ENST00000566126 RPP25Q9BUL9 199 aaKnown RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms