RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 KANSL1LA0AUZ9 987 aa10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 FAM170BA6NMN3 283 aa10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 NT5C1B-RDH14C9J2C7 533 aa10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 FOXD2O60548 495 aaPredicted RBP10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 LILRB5O75023 590 aa10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 LRP3O75074 770 aa10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 PROS1P07225 676 aa10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 HOXB3P14651 431 aaPredicted RBP10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 KCNA2P16389 499 aa10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 STAT5BP51692 787 aa10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 SHC2P98077 582 aa10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 DSC3Q14574 896 aa10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 ERICH6BQ5W0A0 696 aa10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 HOMER1Q86YM7 354 aa10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 KIAA0319LQ8IZA0 1049 aa10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 ENAHQ8N8S7 591 aaPredicted RBP10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 RNF169Q8NCN4 708 aa10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 CMASQ8NFW8 434 aaPredicted RBP10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 SMARCC2Q8TAQ2 1214 aa10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 TRAPPC12Q8WVT3 735 aa10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 MRPL9Q9BYD2 267 aaKnown RBP10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 FAM126AQ9BYI3 521 aaPredicted RBP10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 OSBPL6Q9BZF3 934 aa10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 FOXQ1Q9C009 403 aa10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 ZBP1Q9H171 429 aa10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 PARD6AQ9NPB6 346 aa10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 STK39Q9UEW8 545 aa10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 PLXNA4Q9HCM2 1894 aa10.36□□□□□ -0.75
VPS9D1-205ENST00000565452 KAT6AQ92794 2004 aa10.35□□□□□ -0.75
VPS9D1-205ENST00000565452 SOBPA7XYQ1 873 aa10.35□□□□□ -0.75
VPS9D1-205ENST00000565452 NCAM2O15394 837 aa10.35□□□□□ -0.75
VPS9D1-205ENST00000565452 N4BP1O75113 896 aaKnown RBP10.35□□□□□ -0.75
VPS9D1-205ENST00000565452 NEFLP07196 543 aa10.35□□□□□ -0.75
VPS9D1-205ENST00000565452 KCNA4P22459 653 aa10.35□□□□□ -0.75
VPS9D1-205ENST00000565452 SLC26A2P50443 739 aa10.35□□□□□ -0.75
VPS9D1-205ENST00000565452 SPEM2Q0P670 501 aa10.35□□□□□ -0.75
VPS9D1-205ENST00000565452 ECHDC2Q86YB7 292 aa10.35□□□□□ -0.75
VPS9D1-205ENST00000565452 CELF5Q8N6W0 485 aaKnown RBP10.35□□□□□ -0.75
VPS9D1-205ENST00000565452 PI4K2BQ8TCG2 481 aa10.35□□□□□ -0.75
VPS9D1-205ENST00000565452 TMEM40Q8WWA1 233 aa10.35□□□□□ -0.75
VPS9D1-205ENST00000565452 KLHL5Q96PQ7 755 aa10.35□□□□□ -0.75
VPS9D1-205ENST00000565452 PIGSQ96S52 555 aa10.35□□□□□ -0.75
VPS9D1-205ENST00000565452 NELL2Q99435 816 aa10.35□□□□□ -0.75
VPS9D1-205ENST00000565452 RHOBTB2Q9BYZ6 727 aa10.35□□□□□ -0.75
VPS9D1-205ENST00000565452 DCTPP1Q9H773 170 aa10.35□□□□□ -0.75
VPS9D1-205ENST00000565452 RNF19AQ9NV58 838 aa10.35□□□□□ -0.75
VPS9D1-205ENST00000565452 ZSWIM5Q9P217 1185 aa10.35□□□□□ -0.75
VPS9D1-205ENST00000565452 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.35□□□□□ -0.75
VPS9D1-205ENST00000565452 ZMYM6O95789 1325 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 CACNA1IQ9P0X4 2223 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 PALM3A6NDB9 673 aaPredicted RBP10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 HBP1O60381 514 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 LRRN2O75325 713 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 RETP07949 1114 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 LAMP2P13473 410 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 PMLP29590 882 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 CLCN4P51793 760 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 NRLP54845 237 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 PRKCQQ04759 706 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 SNW1Q13573 536 aaKnown RBP10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 SLC44A4Q53GD3 710 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 ZBTB41Q5SVQ8 909 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 IFIT1BQ5T764 474 aaKnown RBP10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 N4BP2L1Q5TBK1 243 aaPredicted RBP10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 IL31Q6EBC2 164 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 RSPO2Q6UXX9 243 aaPredicted RBP10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 FAM228AQ86W67 206 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 TICAM2Q86XR7 235 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 TBC1D10CQ8IV04 446 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 FEZF2Q8TBJ5 459 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 RSPH1Q8WYR4 309 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 NELL1Q92832 810 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 EVI5LQ96CN4 794 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 IGSF21Q96ID5 467 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 PCYT2Q99447 389 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 UBAC1Q9BSL1 405 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 RWDD1Q9H446 243 aaPredicted RBP10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 RIOX1Q9H6W3 641 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 SLC9A2Q9UBY0 812 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 MAD2L2Q9UI95 211 aa10.34□□□□□ -0.75
VPS9D1-205ENST00000565452 A0A0U1RQF3 1178 aa10.33□□□□□ -0.76
VPS9D1-205ENST00000565452 ANHXE9PGG2 379 aa10.33□□□□□ -0.76
VPS9D1-205ENST00000565452 MFAP1P55081 439 aaKnown RBP10.33□□□□□ -0.76
VPS9D1-205ENST00000565452 HDAC1Q13547 482 aaPredicted RBP10.33□□□□□ -0.76
VPS9D1-205ENST00000565452 MTMR1Q13613 665 aa10.33□□□□□ -0.76
VPS9D1-205ENST00000565452 UBXN2BQ14CS0 331 aa10.33□□□□□ -0.76
VPS9D1-205ENST00000565452 KIZQ2M2Z5 673 aa10.33□□□□□ -0.76
VPS9D1-205ENST00000565452 ZNF484Q5JVG2 852 aa10.33□□□□□ -0.76
VPS9D1-205ENST00000565452 CLLU1OSQ5K130 101 aa10.33□□□□□ -0.76
VPS9D1-205ENST00000565452 LAIR1Q6GTX8 287 aa10.33□□□□□ -0.76
VPS9D1-205ENST00000565452 ZNF710Q8N1W2 664 aa10.33□□□□□ -0.76
VPS9D1-205ENST00000565452 EXOC6Q8TAG9 804 aa10.33□□□□□ -0.76
VPS9D1-205ENST00000565452 HELQQ8TDG4 1101 aa10.33□□□□□ -0.76
VPS9D1-205ENST00000565452 BBXQ8WY36 941 aaPredicted RBP10.33□□□□□ -0.76
VPS9D1-205ENST00000565452 MYADMQ96S97 322 aa10.33□□□□□ -0.76
VPS9D1-205ENST00000565452 OSMRQ99650 979 aa10.33□□□□□ -0.76
VPS9D1-205ENST00000565452 PIDD1Q9HB75 910 aa10.33□□□□□ -0.76
VPS9D1-205ENST00000565452 JPH1Q9HDC5 661 aaPredicted RBP10.33□□□□□ -0.76
VPS9D1-205ENST00000565452 MRPL17Q9NRX2 175 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms