RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 TSKSQ9UJT2 592 aa14.68□□□□□ -0.06
CLK3-215ENST00000564353 PPP1R9AQ9ULJ8 1098 aa14.68□□□□□ -0.06
CLK3-215ENST00000564353 GRIN2DO15399 1336 aa14.68□□□□□ -0.06
CLK3-215ENST00000564353 ATMINO43313 823 aaPredicted RBP14.68□□□□□ -0.06
CLK3-215ENST00000564353 OPA1O60313 960 aa14.68□□□□□ -0.06
CLK3-215ENST00000564353 BUB1BO60566 1050 aaPredicted RBP14.68□□□□□ -0.06
CLK3-215ENST00000564353 EXOC3O60645 756 aa14.68□□□□□ -0.06
CLK3-215ENST00000564353 CALCAP01258 141 aa14.68□□□□□ -0.06
CLK3-215ENST00000564353 RPL13P26373 211 aaKnown RBP14.68□□□□□ -0.06
CLK3-215ENST00000564353 PPFIA1Q13136 1202 aa14.68□□□□□ -0.06
CLK3-215ENST00000564353 PPP4R3CPQ6ZMV5 832 aa14.68□□□□□ -0.06
CLK3-215ENST00000564353 LRRC57Q8N9N7 239 aa14.68□□□□□ -0.06
CLK3-215ENST00000564353 SLC20A1Q8WUM9 679 aa14.68□□□□□ -0.06
CLK3-215ENST00000564353 IDI2Q9BXS1 227 aa14.68□□□□□ -0.06
CLK3-215ENST00000564353 PARVGQ9HBI0 331 aa14.68□□□□□ -0.06
CLK3-215ENST00000564353 GOLGA8IPA6NC78 632 aa14.67□□□□□ -0.06
CLK3-215ENST00000564353 GOLGA8JA6NMD2 632 aa14.67□□□□□ -0.06
CLK3-215ENST00000564353 PPIP5K2O43314 1243 aa14.67□□□□□ -0.06
CLK3-215ENST00000564353 ITIH3Q06033 890 aa14.67□□□□□ -0.06
CLK3-215ENST00000564353 C1orf186Q6ZWK4 172 aa14.67□□□□□ -0.06
CLK3-215ENST00000564353 CPNE8Q86YQ8 564 aa14.67□□□□□ -0.06
CLK3-215ENST00000564353 SLC35G2Q8TBE7 412 aa14.67□□□□□ -0.06
CLK3-215ENST00000564353 KAT5Q92993 513 aa14.67□□□□□ -0.06
CLK3-215ENST00000564353 LXNQ9BS40 222 aa14.67□□□□□ -0.06
CLK3-215ENST00000564353 THAP2Q9H0W7 228 aa14.67□□□□□ -0.06
CLK3-215ENST00000564353 GLT8D2Q9H1C3 349 aa14.67□□□□□ -0.06
CLK3-215ENST00000564353 GOLGA8KD6RF30 607 aa14.67□□□□□ -0.06
CLK3-215ENST00000564353 FGGP02679 453 aa14.67□□□□□ -0.06
CLK3-215ENST00000564353 TNNC1P63316 161 aa14.67□□□□□ -0.06
CLK3-215ENST00000564353 GRIPAP1Q4V328 841 aa14.67□□□□□ -0.06
CLK3-215ENST00000564353 GPATCH11Q8N954 259 aa14.67□□□□□ -0.06
CLK3-215ENST00000564353 UHMK1Q8TAS1 419 aaKnown RBP14.67□□□□□ -0.06
CLK3-215ENST00000564353 SH3GL2Q99962 352 aa14.67□□□□□ -0.06
CLK3-215ENST00000564353 H0YIN7 160 aa14.66□□□□□ -0.06
CLK3-215ENST00000564353 GCOM1H8Y6P7 765 aaPredicted RBP14.66□□□□□ -0.06
CLK3-215ENST00000564353 POLR2MP0CAP2 368 aa14.66□□□□□ -0.06
CLK3-215ENST00000564353 PSMC2P35998 433 aaKnown RBP14.66□□□□□ -0.06
CLK3-215ENST00000564353 STAT1P42224 750 aa14.66□□□□□ -0.06
CLK3-215ENST00000564353 FMO5P49326 533 aa14.66□□□□□ -0.06
CLK3-215ENST00000564353 ZC3H3Q8IXZ2 948 aaKnown RBP14.66□□□□□ -0.06
CLK3-215ENST00000564353 IL31RAQ8NI17 732 aa14.66□□□□□ -0.06
CLK3-215ENST00000564353 CAVIN3Q969G5 261 aa14.66□□□□□ -0.06
CLK3-215ENST00000564353 GMCL1Q96IK5 515 aa14.66□□□□□ -0.06
CLK3-215ENST00000564353 TSPYL1Q9H0U9 437 aa14.66□□□□□ -0.06
CLK3-215ENST00000564353 GPRC5CQ9NQ84 441 aa14.66□□□□□ -0.06
CLK3-215ENST00000564353 SHTN1A0MZ66 631 aa14.66□□□□□ -0.06
CLK3-215ENST00000564353 SMIM23A6NLE4 172 aa14.66□□□□□ -0.06
CLK3-215ENST00000564353 F8VZ95 297 aa14.66□□□□□ -0.06
CLK3-215ENST00000564353 NDUFAB1O14561 156 aa14.66□□□□□ -0.06
CLK3-215ENST00000564353 HIP1RO75146 1068 aa14.66□□□□□ -0.06
CLK3-215ENST00000564353 FOSP01100 380 aaPredicted RBP14.66□□□□□ -0.06
CLK3-215ENST00000564353 GCLMP48507 274 aa14.66□□□□□ -0.06
CLK3-215ENST00000564353 CHADLQ6NUI6 762 aa14.66□□□□□ -0.06
CLK3-215ENST00000564353 IQCKQ8N0W5 287 aa14.66□□□□□ -0.06
CLK3-215ENST00000564353 MICALL1Q8N3F8 863 aa14.66□□□□□ -0.06
CLK3-215ENST00000564353 GMCL1P1Q8NEA9 526 aa14.66□□□□□ -0.06
CLK3-215ENST00000564353 GLG1Q92896 1179 aa14.66□□□□□ -0.06
CLK3-215ENST00000564353 WDR11Q9BZH6 1224 aa14.66□□□□□ -0.06
CLK3-215ENST00000564353 PLCB1Q9NQ66 1216 aa14.66□□□□□ -0.06
CLK3-215ENST00000564353 AGPAT3Q9NRZ7 376 aa14.66□□□□□ -0.06
CLK3-215ENST00000564353 DCDC2CA8MYV0 355 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 K7ENM7 598 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 PGRMC1O00264 195 aaKnown RBP14.65□□□□□ -0.06
CLK3-215ENST00000564353 FOXN3O00409 490 aaPredicted RBP14.65□□□□□ -0.06
CLK3-215ENST00000564353 EIF3HO15372 352 aaKnown RBP eCLIP14.65□□□□□ -0.06
CLK3-215ENST00000564353 PSMD10O75832 226 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 ECHS1P30084 290 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 JAM2P57087 298 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 PHLDB3Q6NSJ2 640 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 PHLDB2Q86SQ0 1253 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 KIFC3Q9BVG8 833 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 EFCC1Q9HA90 598 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 PPANQ9NQ55 473 aaKnown RBP14.65□□□□□ -0.06
CLK3-215ENST00000564353 TBX3O15119 743 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 PLSCR1O15162 318 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 TMOD1P28289 359 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 HSD17B3P37058 310 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 ZNF720Q7Z2F6 126 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 VPS36Q86VN1 386 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 BTBD6Q96KE9 485 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 CBWD1Q9BRT8 395 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 PDGFDQ9GZP0 370 aaPredicted RBP14.65□□□□□ -0.06
CLK3-215ENST00000564353 GOPCQ9HD26 462 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 FRMD4BQ9Y2L6 1034 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 NFIBO00712 420 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 RPS6KA5O75582 802 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 CTNNA1P35221 906 aaKnown RBP14.65□□□□□ -0.06
CLK3-215ENST00000564353 MARCKSL1P49006 195 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 SOX10P56693 466 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 UAP1Q16222 522 aaPredicted RBP14.65□□□□□ -0.06
CLK3-215ENST00000564353 CEP55Q53EZ4 464 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 ALS2CLQ60I27 953 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 HS2ST1Q7LGA3 356 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 NT5DC3Q86UY8 548 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 PACS2Q86VP3 889 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 FIZ1Q96SL8 496 aa14.65□□□□□ -0.06
CLK3-215ENST00000564353 INTS2Q9H0H0 1204 aaKnown RBP14.65□□□□□ -0.06
CLK3-215ENST00000564353 TAF1DQ9H5J8 278 aaPredicted RBP14.65□□□□□ -0.06
CLK3-215ENST00000564353 UBE2TQ9NPD8 197 aaPredicted RBP14.65□□□□□ -0.06
CLK3-215ENST00000564353 FBXL5Q9UKA1 691 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms