RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 CTTNQ14247 550 aaKnown RBP22.38■■□□□ 1.17
SHCBP1-203ENST00000564272 SAFBQ15424 915 aaKnown RBP eCLIP22.38■■□□□ 1.17
SHCBP1-203ENST00000564272 PTPROQ16827 1216 aa22.38■■□□□ 1.17
SHCBP1-203ENST00000564272 SLC24A5Q71RS6 500 aa22.38■■□□□ 1.17
SHCBP1-203ENST00000564272 ZNF710Q8N1W2 664 aa22.38■■□□□ 1.17
SHCBP1-203ENST00000564272 SYMPKQ92797 1274 aaKnown RBP22.38■■□□□ 1.17
SHCBP1-203ENST00000564272 RWDD3Q9Y3V2 267 aa22.38■■□□□ 1.17
SHCBP1-203ENST00000564272 PCDHB7Q9Y5E2 793 aa22.38■■□□□ 1.17
SHCBP1-203ENST00000564272 SPTBN5Q9NRC6 3674 aaKnown RBP22.38■■□□□ 1.17
SHCBP1-203ENST00000564272 DKC1O60832 514 aaKnown RBP eCLIP22.37■■□□□ 1.17
SHCBP1-203ENST00000564272 MAFO75444 373 aaPredicted RBP22.37■■□□□ 1.17
SHCBP1-203ENST00000564272 CSDE1O75534 798 aaKnown RBP22.37■■□□□ 1.17
SHCBP1-203ENST00000564272 KCNQ1P51787 676 aa22.37■■□□□ 1.17
SHCBP1-203ENST00000564272 HMGN5P82970 282 aaKnown RBP22.37■■□□□ 1.17
SHCBP1-203ENST00000564272 RABEP1Q15276 862 aa22.37■■□□□ 1.17
SHCBP1-203ENST00000564272 FAM43BQ6ZT52 329 aaPredicted RBP22.37■■□□□ 1.17
SHCBP1-203ENST00000564272 HLA-CQ95604 372 aa22.37■■□□□ 1.17
SHCBP1-203ENST00000564272 CEP170P1Q96L14 293 aa22.37■■□□□ 1.17
SHCBP1-203ENST00000564272 C11orf84Q9BUA3 381 aaPredicted RBP22.37■■□□□ 1.17
SHCBP1-203ENST00000564272 BMP2KQ9NSY1 1161 aaPredicted RBP22.37■■□□□ 1.17
SHCBP1-203ENST00000564272 SUCLA2Q9P2R7 463 aaPredicted RBP22.37■■□□□ 1.17
SHCBP1-203ENST00000564272 TTC28Q96AY4 2481 aa22.37■■□□□ 1.17
SHCBP1-203ENST00000564272 FNDC1Q4ZHG4 1894 aaPredicted RBP22.37■■□□□ 1.17
SHCBP1-203ENST00000564272 ARID2Q68CP9 1835 aa22.36■■□□□ 1.17
SHCBP1-203ENST00000564272 A0A087WZ62 844 aa22.36■■□□□ 1.17
SHCBP1-203ENST00000564272 GRM6O15303 877 aa22.36■■□□□ 1.17
SHCBP1-203ENST00000564272 RB1P06400 928 aa22.36■■□□□ 1.17
SHCBP1-203ENST00000564272 DNM2P50570 870 aa22.36■■□□□ 1.17
SHCBP1-203ENST00000564272 TIGD5Q53EQ6 642 aa22.36■■□□□ 1.17
SHCBP1-203ENST00000564272 FAM102BQ5T8I3 360 aa22.36■■□□□ 1.17
SHCBP1-203ENST00000564272 RHPN2Q8IUC4 686 aa22.36■■□□□ 1.17
SHCBP1-203ENST00000564272 C4orf19Q8IY42 314 aa22.36■■□□□ 1.17
SHCBP1-203ENST00000564272 FDXACB1Q9BRP7 624 aaPredicted RBP22.36■■□□□ 1.17
SHCBP1-203ENST00000564272 TMEM60Q9H2L4 133 aa22.36■■□□□ 1.17
SHCBP1-203ENST00000564272 TTC12Q9H892 705 aaPredicted RBP22.36■■□□□ 1.17
SHCBP1-203ENST00000564272 COG5Q9UP83 839 aa22.36■■□□□ 1.17
SHCBP1-203ENST00000564272 BRWD1Q9NSI6 2320 aa22.36■■□□□ 1.17
SHCBP1-203ENST00000564272 TBKBP1A7MCY6 615 aa22.35■■□□□ 1.17
SHCBP1-203ENST00000564272 ZBTB39O15060 712 aa22.35■■□□□ 1.17
SHCBP1-203ENST00000564272 CSPG5O95196 566 aa22.35■■□□□ 1.17
SHCBP1-203ENST00000564272 FGFR1P11362 822 aa22.35■■□□□ 1.17
SHCBP1-203ENST00000564272 YWHABP31946 246 aaKnown RBP22.35■■□□□ 1.17
SHCBP1-203ENST00000564272 MCM7P33993 719 aa22.35■■□□□ 1.17
SHCBP1-203ENST00000564272 TXKP42681 527 aa22.35■■□□□ 1.17
SHCBP1-203ENST00000564272 KSR1Q8IVT5 923 aa22.35■■□□□ 1.17
SHCBP1-203ENST00000564272 FAM184AQ8NB25 1140 aa22.35■■□□□ 1.17
SHCBP1-203ENST00000564272 IL27Q8NEV9 243 aa22.35■■□□□ 1.17
SHCBP1-203ENST00000564272 ADAMTS19Q8TE59 1207 aa22.35■■□□□ 1.17
SHCBP1-203ENST00000564272 MTMR9Q96QG7 549 aa22.35■■□□□ 1.17
SHCBP1-203ENST00000564272 EIF2AK1Q9BQI3 630 aaKnown RBP22.35■■□□□ 1.17
SHCBP1-203ENST00000564272 GCOM2Q9BZD3 368 aaPredicted RBP22.35■■□□□ 1.17
SHCBP1-203ENST00000564272 ZSWIM4Q9H7M6 989 aa22.35■■□□□ 1.17
SHCBP1-203ENST00000564272 TMEM161AQ9NX61 479 aa22.35■■□□□ 1.17
SHCBP1-203ENST00000564272 PCDHA12Q9UN75 941 aa22.35■■□□□ 1.17
SHCBP1-203ENST00000564272 POLGP54098 1239 aaPredicted RBP22.34■■□□□ 1.17
SHCBP1-203ENST00000564272 FAM189BP81408 668 aa22.34■■□□□ 1.17
SHCBP1-203ENST00000564272 AAK1Q2M2I8 961 aa22.34■■□□□ 1.17
SHCBP1-203ENST00000564272 TCEAL5Q5H9L2 206 aa22.34■■□□□ 1.17
SHCBP1-203ENST00000564272 TPH2Q8IWU9 490 aa22.34■■□□□ 1.17
SHCBP1-203ENST00000564272 FBXO18Q8NFZ0 1043 aa22.34■■□□□ 1.17
SHCBP1-203ENST00000564272 SLC7A3Q8WY07 619 aa22.34■■□□□ 1.17
SHCBP1-203ENST00000564272 NLRP4Q96MN2 994 aa22.34■■□□□ 1.17
SHCBP1-203ENST00000564272 JPH2Q9BR39 696 aaPredicted RBP22.34■■□□□ 1.17
SHCBP1-203ENST00000564272 PLVAPQ9BX97 442 aa22.34■■□□□ 1.17
SHCBP1-203ENST00000564272 FOXP1Q9H334 677 aaPredicted RBP22.34■■□□□ 1.17
SHCBP1-203ENST00000564272 ATP6V0A4Q9HBG4 840 aa22.34■■□□□ 1.17
SHCBP1-203ENST00000564272 HCSTQ9UBK5 93 aa22.34■■□□□ 1.17
SHCBP1-203ENST00000564272 TCF20Q9UGU0 1960 aaKnown RBP22.34■■□□□ 1.17
SHCBP1-203ENST00000564272 MYO7AQ13402 2215 aa22.33■■□□□ 1.17
SHCBP1-203ENST00000564272 POTEMA6NI47 508 aa22.33■■□□□ 1.17
SHCBP1-203ENST00000564272 SLITRK3O94933 977 aa22.33■■□□□ 1.17
SHCBP1-203ENST00000564272 ZSCAN20P17040 1043 aaPredicted RBP22.33■■□□□ 1.17
SHCBP1-203ENST00000564272 ZNF410Q86VK4 478 aa22.33■■□□□ 1.17
SHCBP1-203ENST00000564272 TMEM143Q96AN5 459 aa22.33■■□□□ 1.17
SHCBP1-203ENST00000564272 DHX33Q9H6R0 707 aaKnown RBP22.33■■□□□ 1.17
SHCBP1-203ENST00000564272 ELAC1Q9H777 363 aaKnown RBP22.33■■□□□ 1.17
SHCBP1-203ENST00000564272 ALG13Q9NP73 1137 aaKnown RBP22.33■■□□□ 1.17
SHCBP1-203ENST00000564272 RNF216Q9NWF9 866 aaPredicted RBP22.33■■□□□ 1.17
SHCBP1-203ENST00000564272 PPME1Q9Y570 386 aa22.33■■□□□ 1.17
SHCBP1-203ENST00000564272 ST18O60284 1047 aa22.32■■□□□ 1.16
SHCBP1-203ENST00000564272 CD2BP2O95400 341 aaKnown RBP22.32■■□□□ 1.16
SHCBP1-203ENST00000564272 BMP1P13497 986 aa22.32■■□□□ 1.16
SHCBP1-203ENST00000564272 RFC5P40937 340 aa22.32■■□□□ 1.16
SHCBP1-203ENST00000564272 CDC42EP1Q00587 391 aa22.32■■□□□ 1.16
SHCBP1-203ENST00000564272 EMC2Q15006 297 aa22.32■■□□□ 1.16
SHCBP1-203ENST00000564272 XKR9Q5GH70 373 aa22.32■■□□□ 1.16
SHCBP1-203ENST00000564272 ECHDC2Q86YB7 292 aa22.32■■□□□ 1.16
SHCBP1-203ENST00000564272 HSD17B14Q9BPX1 270 aa22.32■■□□□ 1.16
SHCBP1-203ENST00000564272 NSUN3Q9H649 340 aaKnown RBP22.32■■□□□ 1.16
SHCBP1-203ENST00000564272 UBE2ZQ9H832 354 aaPredicted RBP22.32■■□□□ 1.16
SHCBP1-203ENST00000564272 UPF2Q9HAU5 1272 aaKnown RBP22.32■■□□□ 1.16
SHCBP1-203ENST00000564272 RNF19AQ9NV58 838 aa22.32■■□□□ 1.16
SHCBP1-203ENST00000564272 PLAGL2Q9UPG8 496 aa22.32■■□□□ 1.16
SHCBP1-203ENST00000564272 COL4A3BPQ9Y5P4 624 aa22.32■■□□□ 1.16
SHCBP1-203ENST00000564272 XIRP2A4UGR9 3374 aa22.31■■□□□ 1.16
SHCBP1-203ENST00000564272 ITGB1P05556 798 aa22.31■■□□□ 1.16
SHCBP1-203ENST00000564272 SFPQP23246 707 aaKnown RBP eCLIP22.31■■□□□ 1.16
SHCBP1-203ENST00000564272 GNL2Q13823 731 aaKnown RBP22.31■■□□□ 1.16
SHCBP1-203ENST00000564272 ZNF174Q15697 407 aa22.31■■□□□ 1.16
SHCBP1-203ENST00000564272 OTUD6AQ7L8S5 288 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms