RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 EPM2AIP1Q7L775 607 aaPredicted RBP19.44■□□□□ 0.7
GDE1-203ENST00000564172 SCFD2Q8WU76 684 aa19.44■□□□□ 0.7
GDE1-203ENST00000564172 MAML3Q96JK9 1138 aa19.44■□□□□ 0.7
GDE1-203ENST00000564172 MRPL44Q9H9J2 332 aaKnown RBP19.44■□□□□ 0.7
GDE1-203ENST00000564172 ZNF302Q9NR11 478 aa19.44■□□□□ 0.7
GDE1-203ENST00000564172 INTS13Q9NVM9 706 aa19.44■□□□□ 0.7
GDE1-203ENST00000564172 SEL1LQ9UBV2 794 aa19.44■□□□□ 0.7
GDE1-203ENST00000564172 LOXHD1Q8IVV2 1947 aa19.44■□□□□ 0.7
GDE1-203ENST00000564172 TXNP10599 105 aaKnown RBP19.44■□□□□ 0.7
GDE1-203ENST00000564172 PRKCEQ02156 737 aa19.44■□□□□ 0.7
GDE1-203ENST00000564172 GRM1Q13255 1194 aa19.44■□□□□ 0.7
GDE1-203ENST00000564172 TTLL4Q14679 1199 aa19.44■□□□□ 0.7
GDE1-203ENST00000564172 TCP11X2Q5H9J9 407 aa19.44■□□□□ 0.7
GDE1-203ENST00000564172 MAEAQ7L5Y9 396 aa19.44■□□□□ 0.7
GDE1-203ENST00000564172 NOC3LQ8WTT2 800 aaKnown RBP19.44■□□□□ 0.7
GDE1-203ENST00000564172 SEPT1Q8WYJ6 367 aa19.44■□□□□ 0.7
GDE1-203ENST00000564172 EEF2KMTQ96G04 330 aa19.44■□□□□ 0.7
GDE1-203ENST00000564172 CTAGE1Q96RT6 745 aa19.44■□□□□ 0.7
GDE1-203ENST00000564172 LIMA1Q9UHB6 759 aaKnown RBP19.44■□□□□ 0.7
GDE1-203ENST00000564172 A0A1B0GTH6 734 aa19.43■□□□□ 0.7
GDE1-203ENST00000564172 KCNJ18B7U540 433 aa19.43■□□□□ 0.7
GDE1-203ENST00000564172 ECM2O94769 699 aaPredicted RBP19.43■□□□□ 0.7
GDE1-203ENST00000564172 ATP4AP20648 1035 aa19.43■□□□□ 0.7
GDE1-203ENST00000564172 KCNJ12Q14500 433 aa19.43■□□□□ 0.7
GDE1-203ENST00000564172 ZCWPW2Q504Y3 356 aa19.43■□□□□ 0.7
GDE1-203ENST00000564172 XKR3Q5GH77 459 aa19.43■□□□□ 0.7
GDE1-203ENST00000564172 TMEM63BQ5T3F8 832 aa19.43■□□□□ 0.7
GDE1-203ENST00000564172 CYP4F22Q6NT55 531 aa19.43■□□□□ 0.7
GDE1-203ENST00000564172 TAPT1Q6NXT6 567 aa19.43■□□□□ 0.7
GDE1-203ENST00000564172 NELFCDQ8IXH7 590 aa19.43■□□□□ 0.7
GDE1-203ENST00000564172 FIZ1Q96SL8 496 aa19.43■□□□□ 0.7
GDE1-203ENST00000564172 PCYT2Q99447 389 aa19.43■□□□□ 0.7
GDE1-203ENST00000564172 VTA1Q9NP79 307 aa19.43■□□□□ 0.7
GDE1-203ENST00000564172 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.43■□□□□ 0.7
GDE1-203ENST00000564172 SNAI1O95863 264 aaPredicted RBP19.43■□□□□ 0.7
GDE1-203ENST00000564172 MYBP10242 640 aa19.43■□□□□ 0.7
GDE1-203ENST00000564172 CRHR2Q13324 411 aa19.43■□□□□ 0.7
GDE1-203ENST00000564172 NR1I3Q14994 352 aa19.43■□□□□ 0.7
GDE1-203ENST00000564172 KRT31Q15323 416 aa19.43■□□□□ 0.7
GDE1-203ENST00000564172 HSDL1Q3SXM5 330 aa19.43■□□□□ 0.7
GDE1-203ENST00000564172 MORN1Q5T089 497 aa19.43■□□□□ 0.7
GDE1-203ENST00000564172 NPLOC4Q8TAT6 608 aa19.43■□□□□ 0.7
GDE1-203ENST00000564172 CEP170P1Q96L14 293 aa19.43■□□□□ 0.7
GDE1-203ENST00000564172 KCTD10Q9H3F6 313 aa19.43■□□□□ 0.7
GDE1-203ENST00000564172 PLXNA1Q9UIW2 1896 aa19.42■□□□□ 0.7
GDE1-203ENST00000564172 GCNT3O95395 438 aa19.42■□□□□ 0.7
GDE1-203ENST00000564172 TCF7P36402 384 aaPredicted RBP19.42■□□□□ 0.7
GDE1-203ENST00000564172 CCDC144BQ3MJ40 725 aa19.42■□□□□ 0.7
GDE1-203ENST00000564172 ODR4Q5SWX8 454 aa19.42■□□□□ 0.7
GDE1-203ENST00000564172 CCDC186Q7Z3E2 898 aa19.42■□□□□ 0.7
GDE1-203ENST00000564172 COPS5Q92905 334 aa19.42■□□□□ 0.7
GDE1-203ENST00000564172 TSG101Q99816 390 aa19.42■□□□□ 0.7
GDE1-203ENST00000564172 TIPINQ9BVW5 301 aa19.42■□□□□ 0.7
GDE1-203ENST00000564172 KATNBL1Q9H079 304 aa19.42■□□□□ 0.7
GDE1-203ENST00000564172 ARGLU1Q9NWB6 273 aaPredicted RBP19.42■□□□□ 0.7
GDE1-203ENST00000564172 PRPF6O94906 941 aaKnown RBP19.41■□□□□ 0.7
GDE1-203ENST00000564172 EEF1GP26641 437 aaKnown RBP19.41■□□□□ 0.7
GDE1-203ENST00000564172 NMT1P30419 496 aaKnown RBP19.41■□□□□ 0.7
GDE1-203ENST00000564172 HOXD13P35453 343 aa19.41■□□□□ 0.7
GDE1-203ENST00000564172 ZNF720Q7Z2F6 126 aa19.41■□□□□ 0.7
GDE1-203ENST00000564172 FAM178BQ8IXR5 827 aa19.41■□□□□ 0.7
GDE1-203ENST00000564172 ZNF507Q8TCN5 953 aa19.41■□□□□ 0.7
GDE1-203ENST00000564172 ITFG2Q969R8 447 aa19.41■□□□□ 0.7
GDE1-203ENST00000564172 GPR20Q99678 358 aa19.41■□□□□ 0.7
GDE1-203ENST00000564172 TINF2Q9BSI4 451 aa19.41■□□□□ 0.7
GDE1-203ENST00000564172 SLC5A4Q9NY91 659 aa19.41■□□□□ 0.7
GDE1-203ENST00000564172 SEPT9Q9UHD8 586 aaPredicted RBP19.41■□□□□ 0.7
GDE1-203ENST00000564172 WDR81Q562E7 1941 aa19.41■□□□□ 0.7
GDE1-203ENST00000564172 CLCN6P51797 869 aa19.41■□□□□ 0.7
GDE1-203ENST00000564172 CORO7P57737 925 aa19.41■□□□□ 0.7
GDE1-203ENST00000564172 BMT2Q1RMZ1 405 aa19.41■□□□□ 0.7
GDE1-203ENST00000564172 FILIP1Q7Z7B0 1213 aa19.41■□□□□ 0.7
GDE1-203ENST00000564172 CYP26B1Q9NR63 512 aa19.41■□□□□ 0.7
GDE1-203ENST00000564172 LARSQ9P2J5 1176 aaKnown RBP19.41■□□□□ 0.7
GDE1-203ENST00000564172 RBM47A0AV96 593 aaKnown RBP19.4■□□□□ 0.7
GDE1-203ENST00000564172 NOP56O00567 594 aaKnown RBP19.4■□□□□ 0.7
GDE1-203ENST00000564172 CA12O43570 354 aa19.4■□□□□ 0.7
GDE1-203ENST00000564172 PTGS1P23219 599 aa19.4■□□□□ 0.7
GDE1-203ENST00000564172 STAT5BP51692 787 aa19.4■□□□□ 0.7
GDE1-203ENST00000564172 MAP2K5Q13163 448 aa19.4■□□□□ 0.7
GDE1-203ENST00000564172 KNOP1Q1ED39 458 aaKnown RBP19.4■□□□□ 0.7
GDE1-203ENST00000564172 NYAP1Q6ZVC0 841 aa19.4■□□□□ 0.7
GDE1-203ENST00000564172 TMC6Q7Z403 805 aa19.4■□□□□ 0.7
GDE1-203ENST00000564172 VSTM4Q8IW00 320 aa19.4■□□□□ 0.7
GDE1-203ENST00000564172 AFAP1L1Q8TED9 768 aa19.4■□□□□ 0.7
GDE1-203ENST00000564172 SPATA33Q96N06 139 aa19.4■□□□□ 0.7
GDE1-203ENST00000564172 EIF3CLB5ME19 914 aaKnown RBP19.4■□□□□ 0.7
GDE1-203ENST00000564172 EIF3DO15371 548 aaKnown RBP eCLIP19.4■□□□□ 0.7
GDE1-203ENST00000564172 OATP04181 439 aa19.4■□□□□ 0.7
GDE1-203ENST00000564172 COPB1P53618 953 aaKnown RBP19.4■□□□□ 0.7
GDE1-203ENST00000564172 PTPN21Q16825 1174 aa19.4■□□□□ 0.7
GDE1-203ENST00000564172 MAP9Q49MG5 647 aa19.4■□□□□ 0.7
GDE1-203ENST00000564172 FILIP1LQ4L180 1135 aa19.4■□□□□ 0.7
GDE1-203ENST00000564172 FAM160B1Q5W0V3 765 aa19.4■□□□□ 0.7
GDE1-203ENST00000564172 FAM114A1Q8IWE2 563 aa19.4■□□□□ 0.7
GDE1-203ENST00000564172 OTUD6BQ8N6M0 293 aa19.4■□□□□ 0.7
GDE1-203ENST00000564172 EIF3CQ99613 913 aaKnown RBP19.4■□□□□ 0.7
GDE1-203ENST00000564172 GPRC5CQ9NQ84 441 aa19.4■□□□□ 0.7
GDE1-203ENST00000564172 MAGEC2Q9UBF1 373 aaPredicted RBP19.4■□□□□ 0.7
GDE1-203ENST00000564172 TEX33O43247 280 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms