RNA–Protein interactions for RNA: ENST00000563939.2

CBFB-204, Transcript of core-binding factor subunit beta, humanhuman

TSL 4

Gene CBFB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-204ENST00000563939 CSDE1O75534 798 aaKnown RBP21.47■■□□□ 1.03
CBFB-204ENST00000563939 DARSP14868 501 aaKnown RBP21.47■■□□□ 1.03
CBFB-204ENST00000563939 ZSCAN20P17040 1043 aaPredicted RBP21.47■■□□□ 1.03
CBFB-204ENST00000563939 POU3F3P20264 500 aaPredicted RBP21.47■■□□□ 1.03
CBFB-204ENST00000563939 GJB2P29033 226 aa21.47■■□□□ 1.03
CBFB-204ENST00000563939 TECP42680 631 aa21.47■■□□□ 1.03
CBFB-204ENST00000563939 SARSP49591 514 aaKnown RBP21.47■■□□□ 1.03
CBFB-204ENST00000563939 SLC24A5Q71RS6 500 aa21.47■■□□□ 1.03
CBFB-204ENST00000563939 C1orf112Q9NSG2 853 aa21.47■■□□□ 1.03
CBFB-204ENST00000563939 BMP2KQ9NSY1 1161 aaPredicted RBP21.47■■□□□ 1.03
CBFB-204ENST00000563939 RNF216Q9NWF9 866 aaPredicted RBP21.47■■□□□ 1.03
CBFB-204ENST00000563939 SMC3Q9UQE7 1217 aa21.47■■□□□ 1.03
CBFB-204ENST00000563939 GTF3C3Q9Y5Q9 886 aa21.47■■□□□ 1.03
CBFB-204ENST00000563939 CDH23Q9H251 3354 aa21.47■■□□□ 1.03
CBFB-204ENST00000563939 SIP14410 1827 aa21.46■■□□□ 1.03
CBFB-204ENST00000563939 A0A087WZ62 844 aa21.46■■□□□ 1.03
CBFB-204ENST00000563939 POTEMA6NI47 508 aa21.46■■□□□ 1.03
CBFB-204ENST00000563939 H3BQV1 296 aa21.46■■□□□ 1.03
CBFB-204ENST00000563939 OR52Z1P0C646 297 aa21.46■■□□□ 1.03
CBFB-204ENST00000563939 FGFR4P22455 802 aa21.46■■□□□ 1.03
CBFB-204ENST00000563939 U2AF2P26368 475 aaKnown RBP eCLIP21.46■■□□□ 1.032e-7■■■■□ 20.7
CBFB-204ENST00000563939 RFC5P40937 340 aa21.46■■□□□ 1.03
CBFB-204ENST00000563939 TRAPPC10P48553 1259 aa21.46■■□□□ 1.03
CBFB-204ENST00000563939 KSR1Q8IVT5 923 aa21.46■■□□□ 1.03
CBFB-204ENST00000563939 NEK9Q8TD19 979 aa21.46■■□□□ 1.03
CBFB-204ENST00000563939 TMEM143Q96AN5 459 aa21.46■■□□□ 1.03
CBFB-204ENST00000563939 FDXACB1Q9BRP7 624 aaPredicted RBP21.46■■□□□ 1.03
CBFB-204ENST00000563939 PRDM6Q9NQX0 595 aa21.46■■□□□ 1.03
CBFB-204ENST00000563939 PPME1Q9Y570 386 aa21.46■■□□□ 1.03
CBFB-204ENST00000563939 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.46■■□□□ 1.03
CBFB-204ENST00000563939 A0A087WWV3 80 aa21.45■■□□□ 1.02
CBFB-204ENST00000563939 ORC2Q13416 577 aaPredicted RBP21.45■■□□□ 1.02
CBFB-204ENST00000563939 NBR1Q14596 966 aa21.45■■□□□ 1.02
CBFB-204ENST00000563939 PAN2Q504Q3 1202 aaKnown RBP21.45■■□□□ 1.02
CBFB-204ENST00000563939 CRIPAKQ8N1N5 446 aa21.45■■□□□ 1.02
CBFB-204ENST00000563939 ZNF689Q96CS4 500 aaPredicted RBP21.45■■□□□ 1.02
CBFB-204ENST00000563939 NLRP4Q96MN2 994 aa21.45■■□□□ 1.02
CBFB-204ENST00000563939 CCDC43Q96MW1 224 aaKnown RBP21.45■■□□□ 1.02
CBFB-204ENST00000563939 ADGRA3Q8IWK6 1321 aa21.45■■□□□ 1.02
CBFB-204ENST00000563939 C9IYK1 514 aa21.44■■□□□ 1.02
CBFB-204ENST00000563939 SRGAP2CP0DJJ0 459 aa21.44■■□□□ 1.02
CBFB-204ENST00000563939 CTNNB1P35222 781 aa21.44■■□□□ 1.02
CBFB-204ENST00000563939 GPM6BQ13491 265 aa21.44■■□□□ 1.02
CBFB-204ENST00000563939 DSC3Q14574 896 aa21.44■■□□□ 1.02
CBFB-204ENST00000563939 PRPF31Q8WWY3 499 aaKnown RBP21.44■■□□□ 1.02
CBFB-204ENST00000563939 INO80BQ9C086 356 aaPredicted RBP21.44■■□□□ 1.02
CBFB-204ENST00000563939 DHX33Q9H6R0 707 aaKnown RBP21.44■■□□□ 1.02
CBFB-204ENST00000563939 ANKEF1Q9NU02 776 aa21.44■■□□□ 1.02
CBFB-204ENST00000563939 LMCD1Q9NZU5 365 aa21.44■■□□□ 1.02
CBFB-204ENST00000563939 LYPLA2O95372 231 aa21.43■■□□□ 1.02
CBFB-204ENST00000563939 BMPR1AP36894 532 aa21.43■■□□□ 1.02
CBFB-204ENST00000563939 GATMP50440 423 aa21.43■■□□□ 1.02
CBFB-204ENST00000563939 FAM189BP81408 668 aa21.43■■□□□ 1.02
CBFB-204ENST00000563939 EMC2Q15006 297 aa21.43■■□□□ 1.02
CBFB-204ENST00000563939 ZNF410Q86VK4 478 aa21.43■■□□□ 1.02
CBFB-204ENST00000563939 CMTR2Q8IYT2 770 aaKnown RBP21.43■■□□□ 1.02
CBFB-204ENST00000563939 ERMNQ8TAM6 284 aa21.43■■□□□ 1.02
CBFB-204ENST00000563939 PIGOQ8TEQ8 1089 aa21.43■■□□□ 1.02
CBFB-204ENST00000563939 TCP11Q8WWU5 503 aa21.43■■□□□ 1.02
CBFB-204ENST00000563939 PSPC1Q8WXF1 523 aaKnown RBP21.43■■□□□ 1.02
CBFB-204ENST00000563939 ATP6V0A4Q9HBG4 840 aa21.43■■□□□ 1.02
CBFB-204ENST00000563939 COL4A3BPQ9Y5P4 624 aa21.43■■□□□ 1.02
CBFB-204ENST00000563939 WDR81Q562E7 1941 aa21.43■■□□□ 1.02
CBFB-204ENST00000563939 H3BNC9 293 aa21.42■■□□□ 1.02
CBFB-204ENST00000563939 TOB1P50616 345 aaPredicted RBP21.42■■□□□ 1.02
CBFB-204ENST00000563939 PTPROQ16827 1216 aa21.42■■□□□ 1.02
CBFB-204ENST00000563939 FAM102BQ5T8I3 360 aa21.42■■□□□ 1.02
CBFB-204ENST00000563939 LARP1BQ659C4 914 aaKnown RBP21.42■■□□□ 1.02
CBFB-204ENST00000563939 RNF169Q8NCN4 708 aa21.42■■□□□ 1.02
CBFB-204ENST00000563939 MTRQ99707 1265 aa21.42■■□□□ 1.02
CBFB-204ENST00000563939 RC3H2Q9HBD1 1191 aaKnown RBP21.42■■□□□ 1.02
CBFB-204ENST00000563939 RWDD3Q9Y3V2 267 aa21.42■■□□□ 1.02
CBFB-204ENST00000563939 PCDHB6Q9Y5E3 794 aa21.42■■□□□ 1.02
CBFB-204ENST00000563939 MRPL42Q9Y6G3 142 aaKnown RBP21.42■■□□□ 1.02
CBFB-204ENST00000563939 EYSQ5T1H1 3165 aa21.41■■□□□ 1.02
CBFB-204ENST00000563939 TBKBP1A7MCY6 615 aa21.41■■□□□ 1.02
CBFB-204ENST00000563939 DLL1O00548 723 aa21.41■■□□□ 1.02
CBFB-204ENST00000563939 GAS2O43903 313 aaKnown RBP21.41■■□□□ 1.02
CBFB-204ENST00000563939 RB1P06400 928 aa21.41■■□□□ 1.02
CBFB-204ENST00000563939 XRCC6P12956 609 aaKnown RBP eCLIP21.41■■□□□ 1.02
CBFB-204ENST00000563939 SFPQP23246 707 aaKnown RBP eCLIP21.41■■□□□ 1.02
CBFB-204ENST00000563939 LAMTOR4Q0VGL1 99 aa21.41■■□□□ 1.02
CBFB-204ENST00000563939 PTGDRQ13258 359 aa21.41■■□□□ 1.02
CBFB-204ENST00000563939 SPOUT1Q5T280 376 aaKnown RBP21.41■■□□□ 1.02
CBFB-204ENST00000563939 CATSPER3Q86XQ3 398 aa21.41■■□□□ 1.02
CBFB-204ENST00000563939 C4orf32Q8N8J7 132 aa21.41■■□□□ 1.02
CBFB-204ENST00000563939 TUFT1Q9NNX1 390 aa21.41■■□□□ 1.02
CBFB-204ENST00000563939 TMEM161AQ9NX61 479 aa21.41■■□□□ 1.02
CBFB-204ENST00000563939 TTC3P53804 2025 aa21.41■■□□□ 1.02
CBFB-204ENST00000563939 LOXHD1Q8IVV2 1947 aa21.41■■□□□ 1.02
CBFB-204ENST00000563939 ASAP2O43150 1006 aa21.4■■□□□ 1.02
CBFB-204ENST00000563939 MED24O75448 989 aa21.4■■□□□ 1.02
CBFB-204ENST00000563939 SPATA31C1P0DKV0 1188 aa21.4■■□□□ 1.02
CBFB-204ENST00000563939 FGFR1P11362 822 aa21.4■■□□□ 1.02
CBFB-204ENST00000563939 CATSPER4Q7RTX7 472 aa21.4■■□□□ 1.02
CBFB-204ENST00000563939 CLP1Q92989 425 aaKnown RBP21.4■■□□□ 1.02
CBFB-204ENST00000563939 NACC1Q96RE7 527 aa21.4■■□□□ 1.02
CBFB-204ENST00000563939 C11orf84Q9BUA3 381 aaPredicted RBP21.4■■□□□ 1.02
CBFB-204ENST00000563939 POLR3CQ9BUI4 534 aaPredicted RBP21.4■■□□□ 1.02
CBFB-204ENST00000563939 ELAC1Q9H777 363 aaKnown RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms