RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 RFC2P35250 354 aa16.42■□□□□ 0.22
SCAMP2-203ENST00000563663 MRPS6P82932 125 aaKnown RBP16.42■□□□□ 0.22
SCAMP2-203ENST00000563663 CEBPZQ03701 1054 aaKnown RBP16.42■□□□□ 0.22
SCAMP2-203ENST00000563663 FAM160A1Q05DH4 1040 aa16.42■□□□□ 0.22
SCAMP2-203ENST00000563663 GRB10Q13322 594 aa16.42■□□□□ 0.22
SCAMP2-203ENST00000563663 PPIGQ13427 754 aaKnown RBP eCLIP16.42■□□□□ 0.22
SCAMP2-203ENST00000563663 SNW1Q13573 536 aaKnown RBP16.42■□□□□ 0.22
SCAMP2-203ENST00000563663 SHHQ15465 462 aa16.42■□□□□ 0.22
SCAMP2-203ENST00000563663 CAMK4Q16566 473 aa16.42■□□□□ 0.22
SCAMP2-203ENST00000563663 HAUS3Q68CZ6 603 aa16.42■□□□□ 0.22
SCAMP2-203ENST00000563663 CCDC73Q6ZRK6 1079 aa16.42■□□□□ 0.22
SCAMP2-203ENST00000563663 SNX29Q8TEQ0 813 aa16.42■□□□□ 0.22
SCAMP2-203ENST00000563663 TMEM40Q8WWA1 233 aa16.42■□□□□ 0.22
SCAMP2-203ENST00000563663 UBE2OQ9C0C9 1292 aaKnown RBP16.42■□□□□ 0.22
SCAMP2-203ENST00000563663 CDHR5Q9HBB8 845 aa16.42■□□□□ 0.22
SCAMP2-203ENST00000563663 SRPRBQ9Y5M8 271 aaKnown RBP16.42■□□□□ 0.22
SCAMP2-203ENST00000563663 CDY2AQ9Y6F7 541 aa16.42■□□□□ 0.22
SCAMP2-203ENST00000563663 TBC1D8BQ0IIM8 1120 aa16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 TMEM62Q0P6H9 643 aa16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 TMEM119Q4V9L6 283 aa16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 EFCAB12Q6NXP0 572 aa16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 RETREG2Q8NC44 543 aa16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 CEP170P1Q96L14 293 aa16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 AK8Q96MA6 479 aa16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 CLIC6Q96NY7 704 aa16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 ADAMTS10Q9H324 1103 aa16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 CXXC1Q9P0U4 656 aaPredicted RBP16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 DBR1Q9UK59 544 aaKnown RBP16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 PPME1Q9Y570 386 aa16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 VTNP04004 478 aa16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 CCT6AP40227 531 aaKnown RBP16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 LPIN1Q14693 890 aa16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 TPRNQ4KMQ1 711 aa16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 PLEKHG4Q58EX7 1191 aa16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 FBXO47Q5MNV8 452 aa16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 ZNF365Q70YC5 407 aa16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 DEFB128Q7Z7B8 93 aa16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 TDHQ8IZJ6 230 aa16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 ERMNQ8TAM6 284 aa16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 RAB34Q9BZG1 259 aa16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 CSRNP2Q9H175 543 aa16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 AGO3Q9H9G7 860 aaKnown RBP16.41■□□□□ 0.22
SCAMP2-203ENST00000563663 PARNO95453 639 aaKnown RBP16.4■□□□□ 0.22
SCAMP2-203ENST00000563663 RPLP2P05387 115 aaKnown RBP16.4■□□□□ 0.22
SCAMP2-203ENST00000563663 PFKMP08237 780 aa16.4■□□□□ 0.22
SCAMP2-203ENST00000563663 LONP1P36776 959 aaKnown RBP16.4■□□□□ 0.22
SCAMP2-203ENST00000563663 EMC2Q15006 297 aa16.4■□□□□ 0.22
SCAMP2-203ENST00000563663 XKR9Q5GH70 373 aa16.4■□□□□ 0.22
SCAMP2-203ENST00000563663 AXDND1Q5T1B0 1012 aaPredicted RBP16.4■□□□□ 0.22
SCAMP2-203ENST00000563663 NME8Q8N427 588 aa16.4■□□□□ 0.22
SCAMP2-203ENST00000563663 METTL13Q8N6R0 699 aa16.4■□□□□ 0.22
SCAMP2-203ENST00000563663 KIAA1024Q9UPX6 916 aa16.4■□□□□ 0.22
SCAMP2-203ENST00000563663 A0A1W2PPC1 479 aa16.39■□□□□ 0.21
SCAMP2-203ENST00000563663 GOLGA6L6A8MZA4 724 aa16.39■□□□□ 0.21
SCAMP2-203ENST00000563663 ME1P48163 572 aa16.39■□□□□ 0.21
SCAMP2-203ENST00000563663 SPECC1Q5M775 1068 aa16.39■□□□□ 0.21
SCAMP2-203ENST00000563663 HERVK_113Q902F9 699 aa16.39■□□□□ 0.21
SCAMP2-203ENST00000563663 EPSTI1Q96J88 318 aa16.39■□□□□ 0.21
SCAMP2-203ENST00000563663 NACC1Q96RE7 527 aa16.39■□□□□ 0.21
SCAMP2-203ENST00000563663 CELF4Q9BZC1 486 aaKnown RBP16.39■□□□□ 0.21
SCAMP2-203ENST00000563663 PCDHA7Q9UN72 937 aa16.39■□□□□ 0.21
SCAMP2-203ENST00000563663 TRPV2Q9Y5S1 764 aa16.39■□□□□ 0.21
SCAMP2-203ENST00000563663 TTC3P53804 2025 aa16.39■□□□□ 0.21
SCAMP2-203ENST00000563663 E9PMD0 336 aa16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 KINO60870 393 aaKnown RBP16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 PPP6R2O75170 966 aa16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 RFC5P40937 340 aa16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 GPC3P51654 580 aa16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 ANO6Q4KMQ2 910 aa16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 KRT79Q5XKE5 535 aa16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 PSRC1Q6PGN9 363 aaPredicted RBP16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 OTUD6AQ7L8S5 288 aa16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 MRPS27Q92552 414 aaKnown RBP16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 CCSER1Q9C0I3 900 aa16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 SUGCTQ9HAC7 445 aa16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 CBX8Q9HC52 389 aa16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 BMP2KQ9NSY1 1161 aaPredicted RBP16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 BLOC1S4Q9NUP1 217 aa16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 EYSQ5T1H1 3165 aa16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 COL4A6Q14031 1691 aa16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 A0A087X0B3 334 aa16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 GHRP10912 638 aa16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 ZNF165P49910 485 aa16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 KIZQ2M2Z5 673 aa16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 FAM109BQ6ICB4 259 aaPredicted RBP16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 RSPH3Q86UC2 560 aa16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 FMR1NBQ8N0W7 255 aaPredicted RBP16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 DBF4BQ8NFT6 615 aa16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 TMEM143Q96AN5 459 aa16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 STK24Q9Y6E0 443 aa16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.38■□□□□ 0.219e-8■■■□□ 16.3
SCAMP2-203ENST00000563663 SQORQ9Y6N5 450 aa16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 TRANK1O15050 2925 aa16.38■□□□□ 0.21
SCAMP2-203ENST00000563663 SPTLC2O15270 562 aa16.37■□□□□ 0.21
SCAMP2-203ENST00000563663 SLC26A4O43511 780 aa16.37■□□□□ 0.21
SCAMP2-203ENST00000563663 DGAT1O75907 488 aa16.37■□□□□ 0.21
SCAMP2-203ENST00000563663 ARL2P36404 184 aa16.37■□□□□ 0.21
SCAMP2-203ENST00000563663 POLGP54098 1239 aaPredicted RBP16.37■□□□□ 0.21
SCAMP2-203ENST00000563663 NLRP11P59045 1033 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms