RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.57■□□□□ 0.24
RPUSD1-204ENST00000563560 AKT3Q9Y243 479 aa16.57■□□□□ 0.24
RPUSD1-204ENST00000563560 PCDHB6Q9Y5E3 794 aa16.57■□□□□ 0.24
RPUSD1-204ENST00000563560 MYO7AQ13402 2215 aa16.57■□□□□ 0.24
RPUSD1-204ENST00000563560 ADGRA3Q8IWK6 1321 aa16.56■□□□□ 0.24
RPUSD1-204ENST00000563560 DKC1O60832 514 aaKnown RBP eCLIP16.56■□□□□ 0.24
RPUSD1-204ENST00000563560 MED24O75448 989 aa16.56■□□□□ 0.24
RPUSD1-204ENST00000563560 UPP2O95045 317 aa16.56■□□□□ 0.24
RPUSD1-204ENST00000563560 OR52Z1P0C646 297 aa16.56■□□□□ 0.24
RPUSD1-204ENST00000563560 ATP2B1P20020 1258 aa16.56■□□□□ 0.24
RPUSD1-204ENST00000563560 TMOD1P28289 359 aa16.56■□□□□ 0.24
RPUSD1-204ENST00000563560 FXR2P51116 673 aaKnown RBP eCLIP16.56■□□□□ 0.24
RPUSD1-204ENST00000563560 CATSPER3Q86XQ3 398 aa16.56■□□□□ 0.24
RPUSD1-204ENST00000563560 NPAS4Q8IUM7 802 aa16.56■□□□□ 0.24
RPUSD1-204ENST00000563560 KSR1Q8IVT5 923 aa16.56■□□□□ 0.24
RPUSD1-204ENST00000563560 ZNF668Q96K58 619 aaPredicted RBP16.56■□□□□ 0.24
RPUSD1-204ENST00000563560 MAP7D2Q96T17 732 aa16.56■□□□□ 0.24
RPUSD1-204ENST00000563560 GAS2L1Q99501 681 aaPredicted RBP16.56■□□□□ 0.24
RPUSD1-204ENST00000563560 RNF19AQ9NV58 838 aa16.56■□□□□ 0.24
RPUSD1-204ENST00000563560 GINS2Q9Y248 185 aa16.56■□□□□ 0.24
RPUSD1-204ENST00000563560 C5orf67F2Z3F1 127 aa16.55■□□□□ 0.24
RPUSD1-204ENST00000563560 GPR182O15218 404 aa16.55■□□□□ 0.24
RPUSD1-204ENST00000563560 RFC5P40937 340 aa16.55■□□□□ 0.24
RPUSD1-204ENST00000563560 SARSP49591 514 aaKnown RBP16.55■□□□□ 0.24
RPUSD1-204ENST00000563560 RARRES1P49788 294 aa16.55■□□□□ 0.24
RPUSD1-204ENST00000563560 NFX1Q12986 1120 aaKnown RBP16.55■□□□□ 0.24
RPUSD1-204ENST00000563560 ECM1Q16610 540 aa16.55■□□□□ 0.24
RPUSD1-204ENST00000563560 IGSF22Q8N9C0 903 aa16.55■□□□□ 0.24
RPUSD1-204ENST00000563560 CEP170P1Q96L14 293 aa16.55■□□□□ 0.24
RPUSD1-204ENST00000563560 ADAM2Q99965 735 aa16.55■□□□□ 0.24
RPUSD1-204ENST00000563560 POLR3CQ9BUI4 534 aaPredicted RBP16.55■□□□□ 0.24
RPUSD1-204ENST00000563560 ANKEF1Q9NU02 776 aa16.55■□□□□ 0.24
RPUSD1-204ENST00000563560 SUCLA2Q9P2R7 463 aaPredicted RBP16.55■□□□□ 0.24
RPUSD1-204ENST00000563560 A0A087WWV3 80 aa16.54■□□□□ 0.24
RPUSD1-204ENST00000563560 A0A087WZ62 844 aa16.54■□□□□ 0.24
RPUSD1-204ENST00000563560 XRCC6P12956 609 aaKnown RBP eCLIP16.54■□□□□ 0.24
RPUSD1-204ENST00000563560 ATF7P17544 494 aaPredicted RBP16.54■□□□□ 0.24
RPUSD1-204ENST00000563560 FGFR4P22455 802 aa16.54■□□□□ 0.24
RPUSD1-204ENST00000563560 RPA1P27694 616 aa16.54■□□□□ 0.24
RPUSD1-204ENST00000563560 GATMP50440 423 aa16.54■□□□□ 0.24
RPUSD1-204ENST00000563560 EMC2Q15006 297 aa16.54■□□□□ 0.24
RPUSD1-204ENST00000563560 EPC2Q52LR7 807 aa16.54■□□□□ 0.24
RPUSD1-204ENST00000563560 ZNF598Q86UK7 904 aaKnown RBP16.54■□□□□ 0.24
RPUSD1-204ENST00000563560 ZNF410Q86VK4 478 aa16.54■□□□□ 0.24
RPUSD1-204ENST00000563560 TPH2Q8IWU9 490 aa16.54■□□□□ 0.24
RPUSD1-204ENST00000563560 GDPD5Q8WTR4 605 aa16.54■□□□□ 0.24
RPUSD1-204ENST00000563560 YME1L1Q96TA2 773 aa16.54■□□□□ 0.24
RPUSD1-204ENST00000563560 FDXACB1Q9BRP7 624 aaPredicted RBP16.54■□□□□ 0.24
RPUSD1-204ENST00000563560 MINDY3Q9H8M7 445 aa16.54■□□□□ 0.24
RPUSD1-204ENST00000563560 TUFT1Q9NNX1 390 aa16.54■□□□□ 0.24
RPUSD1-204ENST00000563560 PRDM6Q9NQX0 595 aa16.54■□□□□ 0.24
RPUSD1-204ENST00000563560 TTC28Q96AY4 2481 aa16.53■□□□□ 0.24
RPUSD1-204ENST00000563560 CSDE1O75534 798 aaKnown RBP16.53■□□□□ 0.24
RPUSD1-204ENST00000563560 TECP42680 631 aa16.53■□□□□ 0.24
RPUSD1-204ENST00000563560 CDC42EP1Q00587 391 aa16.53■□□□□ 0.24
RPUSD1-204ENST00000563560 PTGDRQ13258 359 aa16.53■□□□□ 0.24
RPUSD1-204ENST00000563560 SLC24A5Q71RS6 500 aa16.53■□□□□ 0.24
RPUSD1-204ENST00000563560 IFNLR1Q8IU57 520 aaPredicted RBP16.53■□□□□ 0.24
RPUSD1-204ENST00000563560 PIGOQ8TEQ8 1089 aa16.53■□□□□ 0.24
RPUSD1-204ENST00000563560 PRPF31Q8WWY3 499 aaKnown RBP16.53■□□□□ 0.24
RPUSD1-204ENST00000563560 TMEM143Q96AN5 459 aa16.53■□□□□ 0.24
RPUSD1-204ENST00000563560 SAMD11Q96NU1 681 aa16.53■□□□□ 0.24
RPUSD1-204ENST00000563560 JPH2Q9BR39 696 aaPredicted RBP16.53■□□□□ 0.24
RPUSD1-204ENST00000563560 TRAIPQ9BWF2 469 aa16.53■□□□□ 0.24
RPUSD1-204ENST00000563560 ELAC1Q9H777 363 aaKnown RBP16.53■□□□□ 0.24
RPUSD1-204ENST00000563560 C1orf112Q9NSG2 853 aa16.53■□□□□ 0.24
RPUSD1-204ENST00000563560 LMCD1Q9NZU5 365 aa16.53■□□□□ 0.24
RPUSD1-204ENST00000563560 COL4A3BPQ9Y5P4 624 aa16.53■□□□□ 0.24
RPUSD1-204ENST00000563560 H3BNC9 293 aa16.52■□□□□ 0.24
RPUSD1-204ENST00000563560 GAS2O43903 313 aaKnown RBP16.52■□□□□ 0.24
RPUSD1-204ENST00000563560 MARCH6O60337 910 aa16.52■□□□□ 0.24
RPUSD1-204ENST00000563560 ARL2P36404 184 aa16.52■□□□□ 0.24
RPUSD1-204ENST00000563560 PRPHP41219 470 aa16.52■□□□□ 0.24
RPUSD1-204ENST00000563560 ATP2C1P98194 919 aaPredicted RBP16.52■□□□□ 0.24
RPUSD1-204ENST00000563560 XKR9Q5GH70 373 aa16.52■□□□□ 0.24
RPUSD1-204ENST00000563560 ODR4Q5SWX8 454 aa16.52■□□□□ 0.24
RPUSD1-204ENST00000563560 OTUD6AQ7L8S5 288 aa16.52■□□□□ 0.24
RPUSD1-204ENST00000563560 FERMT3Q86UX7 667 aa16.52■□□□□ 0.24
RPUSD1-204ENST00000563560 RHPN2Q8IUC4 686 aa16.52■□□□□ 0.24
RPUSD1-204ENST00000563560 TMEM192Q8IY95 271 aa16.52■□□□□ 0.24
RPUSD1-204ENST00000563560 CMTR2Q8IYT2 770 aaKnown RBP16.52■□□□□ 0.24
RPUSD1-204ENST00000563560 SLC7A3Q8WY07 619 aa16.52■□□□□ 0.24
RPUSD1-204ENST00000563560 MMTAG2Q9BU76 263 aaKnown RBP16.52■□□□□ 0.24
RPUSD1-204ENST00000563560 TMEM161AQ9NX61 479 aa16.52■□□□□ 0.24
RPUSD1-204ENST00000563560 DBR1Q9UK59 544 aaKnown RBP16.52■□□□□ 0.24
RPUSD1-204ENST00000563560 MTUS1Q9ULD2 1270 aa16.52■□□□□ 0.24
RPUSD1-204ENST00000563560 NOL7Q9UMY1 257 aaKnown RBP16.52■□□□□ 0.24
RPUSD1-204ENST00000563560 SMC3Q9UQE7 1217 aa16.52■□□□□ 0.24
RPUSD1-204ENST00000563560 KIF3AQ9Y496 699 aa16.52■□□□□ 0.24
RPUSD1-204ENST00000563560 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.52■□□□□ 0.24
RPUSD1-204ENST00000563560 MRPL42Q9Y6G3 142 aaKnown RBP16.52■□□□□ 0.24
RPUSD1-204ENST00000563560 MUTP22033 750 aa16.51■□□□□ 0.23
RPUSD1-204ENST00000563560 IGFBP4P22692 258 aa16.51■□□□□ 0.23
RPUSD1-204ENST00000563560 HOXA11P31270 313 aaPredicted RBP16.51■□□□□ 0.23
RPUSD1-204ENST00000563560 LAMTOR4Q0VGL1 99 aa16.51■□□□□ 0.23
RPUSD1-204ENST00000563560 PDIA5Q14554 519 aa16.51■□□□□ 0.23
RPUSD1-204ENST00000563560 FAM102BQ5T8I3 360 aa16.51■□□□□ 0.23
RPUSD1-204ENST00000563560 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.51■□□□□ 0.23
RPUSD1-204ENST00000563560 EXOC8Q8IYI6 725 aa16.51■□□□□ 0.23
RPUSD1-204ENST00000563560 ASAP3Q8TDY4 903 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms