RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 ZNF558Q96NG5 402 aa21.14■□□□□ 0.97
NME3-204ENST00000563498 ADAMTS10Q9H324 1103 aa21.14■□□□□ 0.97
NME3-204ENST00000563498 HIDE1A8MVS5 230 aa21.13■□□□□ 0.97
NME3-204ENST00000563498 GNA11P29992 359 aa21.13■□□□□ 0.97
NME3-204ENST00000563498 ADD1P35611 737 aaKnown RBP21.13■□□□□ 0.97
NME3-204ENST00000563498 TCF15Q12870 199 aa21.13■□□□□ 0.97
NME3-204ENST00000563498 EFCAB12Q6NXP0 572 aa21.13■□□□□ 0.97
NME3-204ENST00000563498 ECHDC2Q86YB7 292 aa21.13■□□□□ 0.97
NME3-204ENST00000563498 SPG21Q9NZD8 308 aa21.13■□□□□ 0.97
NME3-204ENST00000563498 AKT3Q9Y243 479 aa21.13■□□□□ 0.97
NME3-204ENST00000563498 WDR64B1ANS9 1081 aa21.12■□□□□ 0.97
NME3-204ENST00000563498 METAP2P50579 478 aaKnown RBP eCLIP21.12■□□□□ 0.97
NME3-204ENST00000563498 PRR16Q569H4 304 aa21.12■□□□□ 0.97
NME3-204ENST00000563498 TRMT1LQ7Z2T5 733 aaKnown RBP21.12■□□□□ 0.97
NME3-204ENST00000563498 LENG9Q96B70 501 aa21.12■□□□□ 0.97
NME3-204ENST00000563498 PHOX2BQ99453 314 aa21.12■□□□□ 0.97
NME3-204ENST00000563498 SAMM50Q9Y512 469 aa21.12■□□□□ 0.97
NME3-204ENST00000563498 NID2Q14112 1375 aa21.11■□□□□ 0.97
NME3-204ENST00000563498 ADAMTS3O15072 1205 aa21.11■□□□□ 0.97
NME3-204ENST00000563498 PRPF3O43395 683 aaKnown RBP21.11■□□□□ 0.97
NME3-204ENST00000563498 EOMESO95936 686 aa21.11■□□□□ 0.97
NME3-204ENST00000563498 OATP04181 439 aa21.11■□□□□ 0.97
NME3-204ENST00000563498 TMC7Q7Z402 723 aa21.11■□□□□ 0.97
NME3-204ENST00000563498 CASP10Q92851 521 aa21.11■□□□□ 0.97
NME3-204ENST00000563498 NRBP2Q9NSY0 501 aa21.11■□□□□ 0.97
NME3-204ENST00000563498 NR2E1Q9Y466 385 aa21.11■□□□□ 0.97
NME3-204ENST00000563498 ZDBF2Q9HCK1 2354 aa21.11■□□□□ 0.97
NME3-204ENST00000563498 A0A0U1RQF3 1178 aa21.1■□□□□ 0.97
NME3-204ENST00000563498 DARSP14868 501 aaKnown RBP21.1■□□□□ 0.97
NME3-204ENST00000563498 FGD1P98174 961 aa21.1■□□□□ 0.97
NME3-204ENST00000563498 SMC1AQ14683 1233 aaKnown RBP21.1■□□□□ 0.97
NME3-204ENST00000563498 TPRNQ4KMQ1 711 aa21.1■□□□□ 0.97
NME3-204ENST00000563498 CLLU1OSQ5K130 101 aa21.1■□□□□ 0.97
NME3-204ENST00000563498 LLGL2Q6P1M3 1020 aa21.1■□□□□ 0.97
NME3-204ENST00000563498 ZNF598Q86UK7 904 aaKnown RBP21.1■□□□□ 0.97
NME3-204ENST00000563498 LRRC71Q8N4P6 559 aa21.1■□□□□ 0.97
NME3-204ENST00000563498 MRPL43Q8N983 215 aaKnown RBP21.1■□□□□ 0.97
NME3-204ENST00000563498 BICD2Q8TD16 824 aa21.1■□□□□ 0.97
NME3-204ENST00000563498 RSPH1Q8WYR4 309 aa21.1■□□□□ 0.97
NME3-204ENST00000563498 NECTIN4Q96NY8 510 aa21.1■□□□□ 0.97
NME3-204ENST00000563498 IRF2BPLQ9H1B7 796 aa21.1■□□□□ 0.97
NME3-204ENST00000563498 DISC1Q9NRI5 854 aa21.1■□□□□ 0.97
NME3-204ENST00000563498 NAP1L2Q9ULW6 460 aaPredicted RBP21.1■□□□□ 0.97
NME3-204ENST00000563498 ZNF862O60290 1169 aa21.09■□□□□ 0.97
NME3-204ENST00000563498 AVPR2P30518 371 aa21.09■□□□□ 0.97
NME3-204ENST00000563498 SFNP31947 248 aa21.09■□□□□ 0.97
NME3-204ENST00000563498 PBX3P40426 434 aa21.09■□□□□ 0.97
NME3-204ENST00000563498 GPC3P51654 580 aa21.09■□□□□ 0.97
NME3-204ENST00000563498 NUBP1P53384 320 aa21.09■□□□□ 0.97
NME3-204ENST00000563498 ITIH3Q06033 890 aa21.09■□□□□ 0.97
NME3-204ENST00000563498 SLC39A11Q8N1S5 342 aa21.09■□□□□ 0.97
NME3-204ENST00000563498 RIT2Q99578 217 aa21.09■□□□□ 0.97
NME3-204ENST00000563498 MRPL9Q9BYD2 267 aaKnown RBP21.09■□□□□ 0.97
NME3-204ENST00000563498 ADAM7Q9H2U9 754 aa21.09■□□□□ 0.97
NME3-204ENST00000563498 DACT1Q9NYF0 836 aa21.09■□□□□ 0.97
NME3-204ENST00000563498 WDR81Q562E7 1941 aa21.08■□□□□ 0.97
NME3-204ENST00000563498 C2orf71A6NGG8 1288 aa21.08■□□□□ 0.97
NME3-204ENST00000563498 VCPP55072 806 aaKnown RBP21.08■□□□□ 0.97
NME3-204ENST00000563498 CDC42EP1Q00587 391 aa21.08■□□□□ 0.97
NME3-204ENST00000563498 PRKCEQ02156 737 aa21.08■□□□□ 0.97
NME3-204ENST00000563498 CES5AQ6NT32 575 aa21.08■□□□□ 0.97
NME3-204ENST00000563498 CCDC148Q8NFR7 591 aa21.08■□□□□ 0.97
NME3-204ENST00000563498 APOL5Q9BWW9 433 aa21.08■□□□□ 0.97
NME3-204ENST00000563498 HCFC2Q9Y5Z7 792 aa21.08■□□□□ 0.97
NME3-204ENST00000563498 CARNS1A5YM72 827 aa21.07■□□□□ 0.96
NME3-204ENST00000563498 MSH4O15457 936 aa21.07■□□□□ 0.96
NME3-204ENST00000563498 ST18O60284 1047 aa21.07■□□□□ 0.96
NME3-204ENST00000563498 ALDH7A1P49419 539 aaKnown RBP21.07■□□□□ 0.96
NME3-204ENST00000563498 USP11P51784 963 aa21.07■□□□□ 0.96
NME3-204ENST00000563498 JAK3P52333 1124 aa21.07■□□□□ 0.96
NME3-204ENST00000563498 TBC1D8BQ0IIM8 1120 aa21.07■□□□□ 0.96
NME3-204ENST00000563498 BMS1Q14692 1282 aaKnown RBP21.07■□□□□ 0.96
NME3-204ENST00000563498 ZBTB33Q86T24 672 aa21.07■□□□□ 0.96
NME3-204ENST00000563498 UBALD2Q8IYN6 164 aa21.07■□□□□ 0.96
NME3-204ENST00000563498 FBXL16Q8N461 479 aa21.07■□□□□ 0.96
NME3-204ENST00000563498 RNF169Q8NCN4 708 aa21.07■□□□□ 0.96
NME3-204ENST00000563498 SLC5A5Q92911 643 aa21.07■□□□□ 0.96
NME3-204ENST00000563498 RIPOR3Q96MK2 946 aa21.07■□□□□ 0.96
NME3-204ENST00000563498 SCLT1Q96NL6 688 aa21.07■□□□□ 0.96
NME3-204ENST00000563498 TRAIPQ9BWF2 469 aa21.07■□□□□ 0.96
NME3-204ENST00000563498 CHST12Q9NRB3 414 aa21.07■□□□□ 0.96
NME3-204ENST00000563498 AKAP17AQ02040 695 aaKnown RBP21.06■□□□□ 0.96
NME3-204ENST00000563498 TARBP2Q15633 366 aaKnown RBP21.06■□□□□ 0.96
NME3-204ENST00000563498 Q6ZUG5 572 aa21.06■□□□□ 0.96
NME3-204ENST00000563498 RDM1Q8NG50 284 aa21.06■□□□□ 0.96
NME3-204ENST00000563498 HELQQ8TDG4 1101 aa21.06■□□□□ 0.96
NME3-204ENST00000563498 NLRP7Q8WX94 980 aa21.06■□□□□ 0.96
NME3-204ENST00000563498 KCNB2Q92953 911 aa21.06■□□□□ 0.96
NME3-204ENST00000563498 BRF1Q92994 677 aa21.06■□□□□ 0.96
NME3-204ENST00000563498 RNF26Q9BY78 433 aaPredicted RBP21.06■□□□□ 0.96
NME3-204ENST00000563498 SORCS3Q9UPU3 1222 aa21.06■□□□□ 0.96
NME3-204ENST00000563498 EDIL3O43854 480 aa21.05■□□□□ 0.96
NME3-204ENST00000563498 GAS7O60861 476 aa21.05■□□□□ 0.96
NME3-204ENST00000563498 CLASP2O75122 1294 aaKnown RBP21.05■□□□□ 0.96
NME3-204ENST00000563498 BCAR1P56945 870 aa21.05■□□□□ 0.96
NME3-204ENST00000563498 MTMR3Q13615 1198 aa21.05■□□□□ 0.96
NME3-204ENST00000563498 NTRK3Q16288 839 aa21.05■□□□□ 0.96
NME3-204ENST00000563498 UGCGQ16739 394 aa21.05■□□□□ 0.96
NME3-204ENST00000563498 KREMEN2Q8NCW0 462 aa21.05■□□□□ 0.96
NME3-204ENST00000563498 TMEM169Q96HH4 297 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms