RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 MICAL1Q8TDZ2 1067 aa17.76■□□□□ 0.43
CLK3-211ENST00000563297 ZNF668Q96K58 619 aaPredicted RBP17.76■□□□□ 0.43
CLK3-211ENST00000563297 RNF19AQ9NV58 838 aa17.76■□□□□ 0.43
CLK3-211ENST00000563297 HCN4Q9Y3Q4 1203 aa17.76■□□□□ 0.43
CLK3-211ENST00000563297 CPLX1O14810 134 aa17.75■□□□□ 0.43
CLK3-211ENST00000563297 FGF18O76093 207 aa17.75■□□□□ 0.43
CLK3-211ENST00000563297 STBD1O95210 358 aa17.75■□□□□ 0.43
CLK3-211ENST00000563297 TDP2O95551 362 aa17.75■□□□□ 0.43
CLK3-211ENST00000563297 ZSCAN20P17040 1043 aaPredicted RBP17.75■□□□□ 0.43
CLK3-211ENST00000563297 GPC3P51654 580 aa17.75■□□□□ 0.43
CLK3-211ENST00000563297 ERVFC1P60507 584 aa17.75■□□□□ 0.43
CLK3-211ENST00000563297 B3GNT9Q6UX72 402 aa17.75■□□□□ 0.43
CLK3-211ENST00000563297 LRRC55Q6ZSA7 311 aa17.75■□□□□ 0.43
CLK3-211ENST00000563297 RDM1Q8NG50 284 aa17.75■□□□□ 0.43
CLK3-211ENST00000563297 MBOAT7Q96N66 472 aa17.75■□□□□ 0.43
CLK3-211ENST00000563297 AIFM3Q96NN9 605 aa17.75■□□□□ 0.43
CLK3-211ENST00000563297 CASD1Q96PB1 797 aa17.75■□□□□ 0.43
CLK3-211ENST00000563297 UPF3BQ9BZI7 483 aaKnown RBP17.75■□□□□ 0.43
CLK3-211ENST00000563297 TLE6Q9H808 572 aa17.75■□□□□ 0.43
CLK3-211ENST00000563297 PER2O15055 1255 aa17.74■□□□□ 0.43
CLK3-211ENST00000563297 GLP2RO95838 553 aa17.74■□□□□ 0.43
CLK3-211ENST00000563297 DARSP14868 501 aaKnown RBP17.74■□□□□ 0.43
CLK3-211ENST00000563297 TBC1D8BQ0IIM8 1120 aa17.74■□□□□ 0.43
CLK3-211ENST00000563297 STK3Q13188 491 aa17.74■□□□□ 0.43
CLK3-211ENST00000563297 MIER3Q7Z3K6 550 aa17.74■□□□□ 0.43
CLK3-211ENST00000563297 ECHDC2Q86YB7 292 aa17.74■□□□□ 0.43
CLK3-211ENST00000563297 THNSL1Q8IYQ7 743 aa17.74■□□□□ 0.43
CLK3-211ENST00000563297 DAGLBQ8NCG7 672 aa17.74■□□□□ 0.43
CLK3-211ENST00000563297 CEP89Q96ST8 783 aa17.74■□□□□ 0.43
CLK3-211ENST00000563297 POP1Q99575 1024 aaKnown RBP17.74■□□□□ 0.43
CLK3-211ENST00000563297 NIFKQ9BYG3 293 aaKnown RBP17.74■□□□□ 0.43
CLK3-211ENST00000563297 TMEM117Q9H0C3 514 aa17.74■□□□□ 0.43
CLK3-211ENST00000563297 TLR9Q9NR96 1032 aa17.74■□□□□ 0.43
CLK3-211ENST00000563297 FGFR4P22455 802 aa17.73■□□□□ 0.43
CLK3-211ENST00000563297 COASYQ13057 564 aa17.73■□□□□ 0.43
CLK3-211ENST00000563297 DRP2Q13474 957 aa17.73■□□□□ 0.43
CLK3-211ENST00000563297 CSPP1Q1MSJ5 1256 aa17.73■□□□□ 0.43
CLK3-211ENST00000563297 XKR3Q5GH77 459 aa17.73■□□□□ 0.43
CLK3-211ENST00000563297 GALNT17Q6IS24 598 aa17.73■□□□□ 0.43
CLK3-211ENST00000563297 MOXD1Q6UVY6 613 aa17.73■□□□□ 0.43
CLK3-211ENST00000563297 FAM177A1Q8N128 213 aaPredicted RBP17.73■□□□□ 0.43
CLK3-211ENST00000563297 SMRP1Q8NCR6 262 aa17.73■□□□□ 0.43
CLK3-211ENST00000563297 ETNPPLQ8TBG4 499 aa17.73■□□□□ 0.43
CLK3-211ENST00000563297 BARX2Q9UMQ3 279 aaPredicted RBP17.73■□□□□ 0.43
CLK3-211ENST00000563297 TRIOO75962 3097 aa17.72■□□□□ 0.43
CLK3-211ENST00000563297 IGKV6-21A0A0C4DH24 114 aa17.72■□□□□ 0.43
CLK3-211ENST00000563297 TMEM150BA6NC51 233 aa17.72■□□□□ 0.43
CLK3-211ENST00000563297 FSCN2O14926 492 aa17.72■□□□□ 0.43
CLK3-211ENST00000563297 HOXA2O43364 376 aa17.72■□□□□ 0.43
CLK3-211ENST00000563297 CSDE1O75534 798 aaKnown RBP17.72■□□□□ 0.43
CLK3-211ENST00000563297 LAG3P18627 525 aa17.72■□□□□ 0.43
CLK3-211ENST00000563297 PLCB3Q01970 1234 aa17.72■□□□□ 0.43
CLK3-211ENST00000563297 MTERF2Q49AM1 385 aa17.72■□□□□ 0.43
CLK3-211ENST00000563297 PDE12Q6L8Q7 609 aaKnown RBP17.72■□□□□ 0.43
CLK3-211ENST00000563297 CPLX2Q6PUV4 134 aaKnown RBP17.72■□□□□ 0.43
CLK3-211ENST00000563297 NLRP7Q8WX94 980 aa17.72■□□□□ 0.43
CLK3-211ENST00000563297 SH2D3AQ9BRG2 576 aa17.72■□□□□ 0.43
CLK3-211ENST00000563297 PDRG1Q9NUG6 133 aa17.72■□□□□ 0.43
CLK3-211ENST00000563297 KCNJ14Q9UNX9 436 aa17.72■□□□□ 0.43
CLK3-211ENST00000563297 LZTS1Q9Y250 596 aa17.72■□□□□ 0.43
CLK3-211ENST00000563297 MUC6Q6W4X9 2439 aa17.71■□□□□ 0.43
CLK3-211ENST00000563297 A0A0U1RQF3 1178 aa17.71■□□□□ 0.43
CLK3-211ENST00000563297 EOMESO95936 686 aa17.71■□□□□ 0.43
CLK3-211ENST00000563297 RBM10P98175 930 aaKnown RBP17.71■□□□□ 0.43
CLK3-211ENST00000563297 CDC42EP1Q00587 391 aa17.71■□□□□ 0.43
CLK3-211ENST00000563297 NONOQ15233 471 aaKnown RBP eCLIP17.71■□□□□ 0.435e-7■■□□□ 13.6
CLK3-211ENST00000563297 DUSP6Q16828 381 aa17.71■□□□□ 0.43
CLK3-211ENST00000563297 INF2Q27J81 1249 aa17.71■□□□□ 0.43
CLK3-211ENST00000563297 CLLU1OSQ5K130 101 aa17.71■□□□□ 0.43
CLK3-211ENST00000563297 KCNT2Q6UVM3 1135 aa17.71■□□□□ 0.43
CLK3-211ENST00000563297 ZNF598Q86UK7 904 aaKnown RBP17.71■□□□□ 0.43
CLK3-211ENST00000563297 RNF135Q8IUD6 432 aa17.71■□□□□ 0.43
CLK3-211ENST00000563297 VN1R2Q8NFZ6 395 aa17.71■□□□□ 0.43
CLK3-211ENST00000563297 MRPS27Q92552 414 aaKnown RBP17.71■□□□□ 0.43
CLK3-211ENST00000563297 SEPT9Q9UHD8 586 aaPredicted RBP17.71■□□□□ 0.43
CLK3-211ENST00000563297 DDX11L8A8MPP1 907 aa17.7■□□□□ 0.42
CLK3-211ENST00000563297 SCRN1Q12765 414 aa17.7■□□□□ 0.42
CLK3-211ENST00000563297 HERC4Q5GLZ8 1057 aaPredicted RBP17.7■□□□□ 0.42
CLK3-211ENST00000563297 KRT25Q7Z3Z0 450 aa17.7■□□□□ 0.42
CLK3-211ENST00000563297 ABI1Q8IZP0 508 aa17.7■□□□□ 0.42
CLK3-211ENST00000563297 RNF169Q8NCN4 708 aa17.7■□□□□ 0.42
CLK3-211ENST00000563297 SCLT1Q96NL6 688 aa17.7■□□□□ 0.42
CLK3-211ENST00000563297 CDCA3Q99618 268 aaPredicted RBP17.7■□□□□ 0.42
CLK3-211ENST00000563297 PHF20Q9BVI0 1012 aa17.7■□□□□ 0.42
CLK3-211ENST00000563297 GCOM2Q9BZD3 368 aaPredicted RBP17.7■□□□□ 0.42
CLK3-211ENST00000563297 DDX25Q9UHL0 483 aaKnown RBP17.7■□□□□ 0.42
CLK3-211ENST00000563297 PUF60Q9UHX1 559 aaKnown RBP17.7■□□□□ 0.42
CLK3-211ENST00000563297 MUTYHQ9UIF7 546 aa17.7■□□□□ 0.42
CLK3-211ENST00000563297 A0A087WZ62 844 aa17.69■□□□□ 0.42
CLK3-211ENST00000563297 EML1O00423 815 aa17.69■□□□□ 0.42
CLK3-211ENST00000563297 SLC37A4O43826 429 aa17.69■□□□□ 0.42
CLK3-211ENST00000563297 MAFO75444 373 aaPredicted RBP17.69■□□□□ 0.42
CLK3-211ENST00000563297 ATF7P17544 494 aaPredicted RBP17.69■□□□□ 0.42
CLK3-211ENST00000563297 PBX3P40426 434 aa17.69■□□□□ 0.42
CLK3-211ENST00000563297 DNM2P50570 870 aa17.69■□□□□ 0.42
CLK3-211ENST00000563297 KCNC3Q14003 757 aa17.69■□□□□ 0.42
CLK3-211ENST00000563297 LETM2Q2VYF4 491 aa17.69■□□□□ 0.42
CLK3-211ENST00000563297 PLPP4Q5VZY2 271 aa17.69■□□□□ 0.42
CLK3-211ENST00000563297 TMEM184AQ6ZMB5 413 aa17.69■□□□□ 0.42
CLK3-211ENST00000563297 ANO5Q75V66 913 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms