RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 ADCY8P40145 1251 aa7.55□□□□□ -1.2
LINC00557-201ENST00000563184 EPHB1P54762 984 aa7.55□□□□□ -1.2
LINC00557-201ENST00000563184 LINC00310P59036 64 aa7.55□□□□□ -1.2
LINC00557-201ENST00000563184 KRT85P78386 507 aa7.55□□□□□ -1.2
LINC00557-201ENST00000563184 SRSF2Q01130 221 aaKnown RBP7.55□□□□□ -1.2
LINC00557-201ENST00000563184 ZNF124Q15973 351 aa7.55□□□□□ -1.2
LINC00557-201ENST00000563184 UGT8Q16880 541 aa7.55□□□□□ -1.2
LINC00557-201ENST00000563184 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.55□□□□□ -1.2
LINC00557-201ENST00000563184 WDR72Q3MJ13 1102 aa7.55□□□□□ -1.2
LINC00557-201ENST00000563184 TMEM200BQ69YZ2 307 aa7.55□□□□□ -1.2
LINC00557-201ENST00000563184 PGM2L1Q6PCE3 622 aa7.55□□□□□ -1.2
LINC00557-201ENST00000563184 ZBTB46Q86UZ6 589 aa7.55□□□□□ -1.2
LINC00557-201ENST00000563184 OR5AN1Q8NGI8 311 aa7.55□□□□□ -1.2
LINC00557-201ENST00000563184 RPGRQ92834 1020 aaKnown RBP7.55□□□□□ -1.2
LINC00557-201ENST00000563184 HOOK2Q96ED9 719 aa7.55□□□□□ -1.2
LINC00557-201ENST00000563184 HAPLN2Q9GZV7 340 aa7.55□□□□□ -1.2
LINC00557-201ENST00000563184 QRSL1Q9H0R6 528 aaKnown RBP7.55□□□□□ -1.2
LINC00557-201ENST00000563184 KCTD10Q9H3F6 313 aa7.55□□□□□ -1.2
LINC00557-201ENST00000563184 KCMF1Q9P0J7 381 aa7.55□□□□□ -1.2
LINC00557-201ENST00000563184 EID1Q9Y6B2 187 aa7.55□□□□□ -1.2
LINC00557-201ENST00000563184 ST20-MTHFSA0A0A6YYL1 179 aa7.54□□□□□ -1.2
LINC00557-201ENST00000563184 CYP7B1O75881 506 aa7.54□□□□□ -1.2
LINC00557-201ENST00000563184 KLHL18O94889 574 aa7.54□□□□□ -1.2
LINC00557-201ENST00000563184 MTNR1BP49286 362 aa7.54□□□□□ -1.2
LINC00557-201ENST00000563184 RAB27AP51159 221 aa7.54□□□□□ -1.2
LINC00557-201ENST00000563184 ANTXR2P58335 489 aa7.54□□□□□ -1.2
LINC00557-201ENST00000563184 ODF1Q14990 250 aa7.54□□□□□ -1.2
LINC00557-201ENST00000563184 KCNA10Q16322 511 aa7.54□□□□□ -1.2
LINC00557-201ENST00000563184 TOR2AQ5JU69 321 aa7.54□□□□□ -1.2
LINC00557-201ENST00000563184 TRMT10BQ6PF06 316 aaKnown RBP7.54□□□□□ -1.2
LINC00557-201ENST00000563184 ADGRG2Q8IZP9 1017 aa7.54□□□□□ -1.2
LINC00557-201ENST00000563184 NUDT10Q8NFP7 164 aa7.54□□□□□ -1.2
LINC00557-201ENST00000563184 WDR48Q8TAF3 677 aa7.54□□□□□ -1.2
LINC00557-201ENST00000563184 NUDT11Q96G61 164 aa7.54□□□□□ -1.2
LINC00557-201ENST00000563184 DNAJC28Q9NX36 388 aa7.54□□□□□ -1.2
LINC00557-201ENST00000563184 FTSJ1Q9UET6 329 aa7.54□□□□□ -1.2
LINC00557-201ENST00000563184 A0A1B0GTL3 188 aa7.53□□□□□ -1.2
LINC00557-201ENST00000563184 SH3D21A4FU49 640 aa7.53□□□□□ -1.2
LINC00557-201ENST00000563184 NPIPB6E9PJ23 425 aa7.53□□□□□ -1.2
LINC00557-201ENST00000563184 H0Y858 1186 aa7.53□□□□□ -1.2
LINC00557-201ENST00000563184 AKAP10O43572 662 aa7.53□□□□□ -1.2
LINC00557-201ENST00000563184 PARNO95453 639 aaKnown RBP7.53□□□□□ -1.2
LINC00557-201ENST00000563184 CFBP00751 764 aa7.53□□□□□ -1.2
LINC00557-201ENST00000563184 LGALS4P56470 323 aa7.53□□□□□ -1.2
LINC00557-201ENST00000563184 MRPS9P82933 396 aaKnown RBP7.53□□□□□ -1.2
LINC00557-201ENST00000563184 TOP3AQ13472 1001 aaPredicted RBP7.53□□□□□ -1.2
LINC00557-201ENST00000563184 KRTAP19-4Q3LI73 84 aa7.53□□□□□ -1.2
LINC00557-201ENST00000563184 GRAMD4Q6IC98 578 aa7.53□□□□□ -1.2
LINC00557-201ENST00000563184 TP53I13Q8NBR0 393 aaPredicted RBP7.53□□□□□ -1.2
LINC00557-201ENST00000563184 RTFDC1Q9BY42 306 aaPredicted RBP7.53□□□□□ -1.2
LINC00557-201ENST00000563184 ZNF277Q9NRM2 450 aaPredicted RBP7.53□□□□□ -1.2
LINC00557-201ENST00000563184 MKS1Q9NXB0 559 aa7.53□□□□□ -1.2
LINC00557-201ENST00000563184 PRSS50Q9UI38 385 aa7.53□□□□□ -1.2
LINC00557-201ENST00000563184 MAGEL2Q9UJ55 1249 aa7.53□□□□□ -1.2
LINC00557-201ENST00000563184 A0A0A6YYK5 440 aaPredicted RBP7.52□□□□□ -1.21
LINC00557-201ENST00000563184 DDX3XO00571 662 aaKnown RBP eCLIP7.52□□□□□ -1.21
LINC00557-201ENST00000563184 AGXTP21549 392 aa7.52□□□□□ -1.21
LINC00557-201ENST00000563184 RAP1GAPP47736 663 aa7.52□□□□□ -1.21
LINC00557-201ENST00000563184 PIN1Q13526 163 aaPredicted RBP7.52□□□□□ -1.21
LINC00557-201ENST00000563184 NFE2Q16621 373 aaPredicted RBP7.52□□□□□ -1.21
LINC00557-201ENST00000563184 ZNF385BQ569K4 471 aa7.52□□□□□ -1.21
LINC00557-201ENST00000563184 TTLL7Q6ZT98 887 aa7.52□□□□□ -1.21
LINC00557-201ENST00000563184 BMP8AQ7Z5Y6 402 aa7.52□□□□□ -1.21
LINC00557-201ENST00000563184 AMOTL1Q8IY63 956 aa7.52□□□□□ -1.21
LINC00557-201ENST00000563184 TSPEARQ8WU66 669 aa7.52□□□□□ -1.21
LINC00557-201ENST00000563184 RAX2Q96IS3 184 aa7.52□□□□□ -1.21
LINC00557-201ENST00000563184 YTHDC1Q96MU7 727 aaKnown RBP7.52□□□□□ -1.21
LINC00557-201ENST00000563184 SPATA25Q9BR10 227 aa7.52□□□□□ -1.21
LINC00557-201ENST00000563184 SOX7Q9BT81 388 aa7.52□□□□□ -1.21
LINC00557-201ENST00000563184 AASDHPPTQ9NRN7 309 aa7.52□□□□□ -1.21
LINC00557-201ENST00000563184 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.52□□□□□ -1.21
LINC00557-201ENST00000563184 PCDHB6Q9Y5E3 794 aa7.52□□□□□ -1.21
LINC00557-201ENST00000563184 A0A0G2JNJ9 132 aa7.51□□□□□ -1.21
LINC00557-201ENST00000563184 RFXAPO00287 272 aa7.51□□□□□ -1.21
LINC00557-201ENST00000563184 ABLIM3O94929 683 aa7.51□□□□□ -1.21
LINC00557-201ENST00000563184 OSMP13725 252 aa7.51□□□□□ -1.21
LINC00557-201ENST00000563184 AFF3P51826 1226 aaKnown RBP7.51□□□□□ -1.21
LINC00557-201ENST00000563184 PPARAQ07869 468 aa7.51□□□□□ -1.21
LINC00557-201ENST00000563184 EIF4HQ15056 248 aaKnown RBP7.51□□□□□ -1.21
LINC00557-201ENST00000563184 DGKDQ16760 1214 aa7.51□□□□□ -1.21
LINC00557-201ENST00000563184 MUM1Q2TAK8 710 aa7.51□□□□□ -1.21
LINC00557-201ENST00000563184 CDYL2Q8N8U2 506 aa7.51□□□□□ -1.21
LINC00557-201ENST00000563184 JADE3Q92613 823 aa7.51□□□□□ -1.21
LINC00557-201ENST00000563184 FDXACB1Q9BRP7 624 aaPredicted RBP7.51□□□□□ -1.21
LINC00557-201ENST00000563184 NOL10Q9BSC4 688 aaKnown RBP7.51□□□□□ -1.21
LINC00557-201ENST00000563184 NTMQ9P121 344 aa7.51□□□□□ -1.21
LINC00557-201ENST00000563184 Q9UFV3 132 aa7.51□□□□□ -1.21
LINC00557-201ENST00000563184 DPP7Q9UHL4 492 aa7.51□□□□□ -1.21
LINC00557-201ENST00000563184 EVLQ9UI08 416 aaPredicted RBP7.51□□□□□ -1.21
LINC00557-201ENST00000563184 FBXO10Q9UK96 956 aa7.51□□□□□ -1.21
LINC00557-201ENST00000563184 CDC42EP3Q9UKI2 254 aa7.51□□□□□ -1.21
LINC00557-201ENST00000563184 USP18Q9UMW8 372 aa7.51□□□□□ -1.21
LINC00557-201ENST00000563184 GPR45Q9Y5Y3 372 aa7.51□□□□□ -1.21
LINC00557-201ENST00000563184 CDY2AQ9Y6F7 541 aa7.51□□□□□ -1.21
LINC00557-201ENST00000563184 KRTAP4-8A0A0G2JLE6 195 aa7.5□□□□□ -1.21
LINC00557-201ENST00000563184 CUTAO60888 179 aa7.5□□□□□ -1.21
LINC00557-201ENST00000563184 POLD1P28340 1107 aa7.5□□□□□ -1.21
LINC00557-201ENST00000563184 MAP3K12Q12852 859 aa7.5□□□□□ -1.21
LINC00557-201ENST00000563184 LRRC41Q15345 812 aa7.5□□□□□ -1.21
LINC00557-201ENST00000563184 CLUL1Q15846 466 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms