RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 LRIT3Q3SXY7 679 aa6.93□□□□□ -1.3
CNOT1-204ENST00000563130 HABP4Q5JVS0 413 aaKnown RBP6.93□□□□□ -1.3
CNOT1-204ENST00000563130 ARL6IP4Q66PJ3 421 aaKnown RBP6.93□□□□□ -1.3
CNOT1-204ENST00000563130 PSRC1Q6PGN9 363 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-204ENST00000563130 ZNF365Q70YC5 407 aa6.93□□□□□ -1.3
CNOT1-204ENST00000563130 RPUSD2Q8IZ73 545 aaKnown RBP6.93□□□□□ -1.3
CNOT1-204ENST00000563130 KIAA0319LQ8IZA0 1049 aa6.93□□□□□ -1.3
CNOT1-204ENST00000563130 NME8Q8N427 588 aa6.93□□□□□ -1.3
CNOT1-204ENST00000563130 DNAJB3Q8WWF6 145 aa6.93□□□□□ -1.3
CNOT1-204ENST00000563130 DYDC2Q96IM9 177 aa6.93□□□□□ -1.3
CNOT1-204ENST00000563130 ZSWIM4Q9H7M6 989 aa6.93□□□□□ -1.3
CNOT1-204ENST00000563130 TRIOBPQ9H2D6 2365 aa6.93□□□□□ -1.3
CNOT1-204ENST00000563130 KDM3AQ9Y4C1 1321 aa6.93□□□□□ -1.3
CNOT1-204ENST00000563130 TMEM150BA6NC51 233 aa6.93□□□□□ -1.3
CNOT1-204ENST00000563130 MAGEB2O15479 319 aa6.93□□□□□ -1.3
CNOT1-204ENST00000563130 CD46P15529 392 aa6.93□□□□□ -1.3
CNOT1-204ENST00000563130 RPA1P27694 616 aa6.93□□□□□ -1.3
CNOT1-204ENST00000563130 YWHABP31946 246 aaKnown RBP6.93□□□□□ -1.3
CNOT1-204ENST00000563130 CYP4A11Q02928 519 aa6.93□□□□□ -1.3
CNOT1-204ENST00000563130 CTTNQ14247 550 aaKnown RBP6.93□□□□□ -1.3
CNOT1-204ENST00000563130 TRMT1LQ7Z2T5 733 aaKnown RBP6.93□□□□□ -1.3
CNOT1-204ENST00000563130 CATSPER3Q86XQ3 398 aa6.93□□□□□ -1.3
CNOT1-204ENST00000563130 HERVK_113Q902F9 699 aa6.93□□□□□ -1.3
CNOT1-204ENST00000563130 POLR3CQ9BUI4 534 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-204ENST00000563130 OSBPL7Q9BZF2 842 aa6.93□□□□□ -1.3
CNOT1-204ENST00000563130 ZSCAN16Q9H4T2 348 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-204ENST00000563130 PPME1Q9Y570 386 aa6.93□□□□□ -1.3
CNOT1-204ENST00000563130 TET1Q8NFU7 2136 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 SCN5AQ14524 2016 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 ZBTB39O15060 712 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 MAFO75444 373 aaPredicted RBP6.92□□□□□ -1.3
CNOT1-204ENST00000563130 MED24O75448 989 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 FGBP02675 491 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 HSP90AA1P07900 732 aaKnown RBP6.92□□□□□ -1.3
CNOT1-204ENST00000563130 CTSHP09668 335 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 XRCC6P12956 609 aaKnown RBP eCLIP6.92□□□□□ -1.3
CNOT1-204ENST00000563130 MUTP22033 750 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 GCGRP47871 477 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 PTPAQ15257 358 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 TMEM266Q2M3C6 531 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 FAM173BQ6P4H8 233 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 DEFB128Q7Z7B8 93 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 RSPH3Q86UC2 560 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 TPH2Q8IWU9 490 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 PARP9Q8IXQ6 854 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 SH2D3AQ9BRG2 576 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 FAM49AQ9H0Q0 323 aaPredicted RBP6.92□□□□□ -1.3
CNOT1-204ENST00000563130 DHX33Q9H6R0 707 aaKnown RBP6.92□□□□□ -1.3
CNOT1-204ENST00000563130 TUFT1Q9NNX1 390 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 CYP26B1Q9NR63 512 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 CXXC1Q9P0U4 656 aaPredicted RBP6.92□□□□□ -1.3
CNOT1-204ENST00000563130 SQORQ9Y6N5 450 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 MORC2Q9Y6X9 1032 aaPredicted RBP6.92□□□□□ -1.3
CNOT1-204ENST00000563130 RBAK-RBAKDNI3L0D1 243 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 BMP15O95972 392 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 SSTR3P32745 418 aaPredicted RBP6.92□□□□□ -1.3
CNOT1-204ENST00000563130 NPEPPSP55786 919 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 MRPS6P82932 125 aaKnown RBP6.92□□□□□ -1.3
CNOT1-204ENST00000563130 TBC1D8BQ0IIM8 1120 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 PKP1Q13835 747 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 SF3A1Q15459 793 aaKnown RBP6.92□□□□□ -1.3
CNOT1-204ENST00000563130 TCTN1Q2MV58 587 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 MTERF2Q49AM1 385 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 PLEKHG4Q58EX7 1191 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 IER5Q5VY09 327 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 PLA2G4FQ68DD2 849 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 EFCAB12Q6NXP0 572 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 DTHD1Q6ZMT9 781 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 MMTAG2Q9BU76 263 aaKnown RBP6.92□□□□□ -1.3
CNOT1-204ENST00000563130 REPIN1Q9BWE0 567 aaKnown RBP6.92□□□□□ -1.3
CNOT1-204ENST00000563130 ANKEF1Q9NU02 776 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 LRWD1Q9UFC0 647 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 CDY2AQ9Y6F7 541 aa6.92□□□□□ -1.3
CNOT1-204ENST00000563130 SIP14410 1827 aa6.91□□□□□ -1.3
CNOT1-204ENST00000563130 GPR32O75388 356 aa6.91□□□□□ -1.3
CNOT1-204ENST00000563130 BAIAP3O94812 1187 aa6.91□□□□□ -1.3
CNOT1-204ENST00000563130 ZSCAN22P10073 491 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-204ENST00000563130 RARRES1P49788 294 aa6.91□□□□□ -1.3
CNOT1-204ENST00000563130 CLCN3P51790 818 aa6.91□□□□□ -1.3
CNOT1-204ENST00000563130 DRP2Q13474 957 aa6.91□□□□□ -1.3
CNOT1-204ENST00000563130 LPIN1Q14693 890 aa6.91□□□□□ -1.3
CNOT1-204ENST00000563130 ECM1Q16610 540 aa6.91□□□□□ -1.3
CNOT1-204ENST00000563130 FBXO47Q5MNV8 452 aa6.91□□□□□ -1.3
CNOT1-204ENST00000563130 HAUS3Q68CZ6 603 aa6.91□□□□□ -1.3
CNOT1-204ENST00000563130 CNKSR3Q6P9H4 555 aa6.91□□□□□ -1.3
CNOT1-204ENST00000563130 OTUD6AQ7L8S5 288 aa6.91□□□□□ -1.3
CNOT1-204ENST00000563130 OTOP2Q7RTS6 562 aa6.91□□□□□ -1.3
CNOT1-204ENST00000563130 LRRC71Q8N4P6 559 aa6.91□□□□□ -1.3
CNOT1-204ENST00000563130 DBF4BQ8NFT6 615 aa6.91□□□□□ -1.3
CNOT1-204ENST00000563130 ERMNQ8TAM6 284 aa6.91□□□□□ -1.3
CNOT1-204ENST00000563130 CEP170P1Q96L14 293 aa6.91□□□□□ -1.3
CNOT1-204ENST00000563130 RNPC3Q96LT9 517 aaKnown RBP6.91□□□□□ -1.3
CNOT1-204ENST00000563130 USP28Q96RU2 1077 aa6.91□□□□□ -1.3
CNOT1-204ENST00000563130 CELF4Q9BZC1 486 aaKnown RBP6.91□□□□□ -1.3
CNOT1-204ENST00000563130 RAB34Q9BZG1 259 aa6.91□□□□□ -1.3
CNOT1-204ENST00000563130 FTOQ9C0B1 505 aaKnown RBP eCLIP6.91□□□□□ -1.3
CNOT1-204ENST00000563130 PCDHB3Q9Y5E6 796 aa6.91□□□□□ -1.3
CNOT1-204ENST00000563130 TRPV2Q9Y5S1 764 aa6.91□□□□□ -1.3
CNOT1-204ENST00000563130 CLIC4Q9Y696 253 aa6.91□□□□□ -1.3
CNOT1-204ENST00000563130 LAMA2P24043 3122 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms