RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 DSC3Q14574 896 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 KCTD21Q4G0X4 260 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 SNRNP48Q6IEG0 339 aaKnown RBP10.1□□□□□ -0.79
CDH1-205ENST00000562836 BTNL9Q6UXG8 535 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 CCDC129Q6ZRS4 1044 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 ATG9AQ7Z3C6 839 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 RHOT2Q8IXI1 618 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 FAM186BQ8IYM0 893 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 DDHD1Q8NEL9 900 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 PALMDQ9NP74 551 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 FAF1Q9UNN5 650 aaPredicted RBP10.1□□□□□ -0.79
CDH1-205ENST00000562836 RPH3AQ9Y2J0 694 aaPredicted RBP10.1□□□□□ -0.79
CDH1-205ENST00000562836 COMMD3-BMI1R4GMX3 469 aa10.1□□□□□ -0.79
CDH1-205ENST00000562836 PRG4Q92954 1404 aaPredicted RBP10.1□□□□□ -0.79
CDH1-205ENST00000562836 COL17A1Q9UMD9 1497 aaPredicted RBP10.1□□□□□ -0.79
CDH1-205ENST00000562836 MATN2O00339 956 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 GLRX3O76003 335 aaKnown RBP10.09□□□□□ -0.79
CDH1-205ENST00000562836 HLA-DRAP01903 254 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 KLHL38Q2WGJ6 581 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 ANO4Q32M45 955 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 CLVS2Q5SYC1 327 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 USP37Q86T82 979 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 NRBF2Q96F24 287 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 PGBD1Q96JS3 809 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 HAPLN3Q96S86 360 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 TSG101Q99816 390 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 GPATCH1Q9BRR8 931 aaKnown RBP10.09□□□□□ -0.79
CDH1-205ENST00000562836 FAM192AQ9GZU8 254 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 VIPAS39Q9H9C1 493 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 STARD7Q9NQZ5 370 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 HPCAL4Q9UM19 191 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 RTCBQ9Y3I0 505 aaKnown RBP10.09□□□□□ -0.79
CDH1-205ENST00000562836 SPEF1Q9Y4P9 236 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 TYW5A2RUC4 315 aaKnown RBP10.09□□□□□ -0.79
CDH1-205ENST00000562836 ZFYP08048 801 aaPredicted RBP10.09□□□□□ -0.79
CDH1-205ENST00000562836 RPL9P32969 192 aaKnown RBP10.09□□□□□ -0.79
CDH1-205ENST00000562836 PRCPP42785 496 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 CSTF3Q12996 717 aaKnown RBP10.09□□□□□ -0.79
CDH1-205ENST00000562836 LRRC41Q15345 812 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 TTC23LQ6PF05 361 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 C4orf22Q6V702 233 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 CCDC116Q8IYX3 515 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 DIS3LQ8TF46 1054 aaKnown RBP10.09□□□□□ -0.79
CDH1-205ENST00000562836 DACT3Q96B18 629 aaPredicted RBP10.09□□□□□ -0.79
CDH1-205ENST00000562836 FAM89AQ96GI7 184 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 CCT8L2Q96SF2 557 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 HAUS8Q9BT25 410 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 SPATA16Q9BXB7 569 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.09□□□□□ -0.79
CDH1-205ENST00000562836 CEP72Q9P209 647 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 ACEP12821 1306 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 TMEM94Q12767 1356 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 PPIP5K1Q6PFW1 1433 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 PRAG1Q86YV5 1406 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 CAPN8A6NHC0 703 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 VWA5AO00534 786 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 IKBKBO14920 756 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 GUCY1B2O75343 617 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 ARHGEF15O94989 841 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 CLK3P49761 638 aaKnown RBP10.09□□□□□ -0.79
CDH1-205ENST00000562836 C21orf58P58505 322 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 ANO6Q4KMQ2 910 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 PLBD1Q6P4A8 553 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 OR8H2Q8N162 312 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 AP1M1Q9BXS5 423 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 TEX13BQ9BXU2 312 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 EPN3Q9H201 632 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 NDST4Q9H3R1 872 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 GPHNQ9NQX3 736 aaPredicted RBP10.09□□□□□ -0.79
CDH1-205ENST00000562836 MALT1Q9UDY8 824 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 AGO2Q9UKV8 859 aaKnown RBP10.09□□□□□ -0.79
CDH1-205ENST00000562836 PRKAB1Q9Y478 270 aa10.09□□□□□ -0.79
CDH1-205ENST00000562836 A0A0U1RQJ8 604 aa10.08□□□□□ -0.8
CDH1-205ENST00000562836 HGSO14964 777 aaPredicted RBP10.08□□□□□ -0.8
CDH1-205ENST00000562836 FGF18O76093 207 aa10.08□□□□□ -0.8
CDH1-205ENST00000562836 APEHP13798 732 aaKnown RBP10.08□□□□□ -0.8
CDH1-205ENST00000562836 TYRO3Q06418 890 aa10.08□□□□□ -0.8
CDH1-205ENST00000562836 CUL1Q13616 776 aa10.08□□□□□ -0.8
CDH1-205ENST00000562836 WDR43Q15061 677 aaKnown RBP eCLIP10.08□□□□□ -0.8
CDH1-205ENST00000562836 CYP4A22Q5TCH4 519 aa10.08□□□□□ -0.8
CDH1-205ENST00000562836 TMEM132EQ6IEE7 984 aa10.08□□□□□ -0.8
CDH1-205ENST00000562836 SHQ1Q6PI26 577 aaKnown RBP10.08□□□□□ -0.8
CDH1-205ENST00000562836 HID1Q8IV36 788 aa10.08□□□□□ -0.8
CDH1-205ENST00000562836 CFAP61Q8NHU2 1237 aa10.08□□□□□ -0.8
CDH1-205ENST00000562836 GTF3C2Q8WUA4 911 aaPredicted RBP10.08□□□□□ -0.8
CDH1-205ENST00000562836 NMD3Q96D46 503 aaKnown RBP10.08□□□□□ -0.8
CDH1-205ENST00000562836 HSPBAP1Q96EW2 488 aa10.08□□□□□ -0.8
CDH1-205ENST00000562836 METTL2AQ96IZ6 378 aaKnown RBP10.08□□□□□ -0.8
CDH1-205ENST00000562836 CCDC77Q9BR77 488 aa10.08□□□□□ -0.8
CDH1-205ENST00000562836 TRIM8Q9BZR9 551 aa10.08□□□□□ -0.8
CDH1-205ENST00000562836 PIH1D3Q9NQM4 214 aaKnown RBP10.08□□□□□ -0.8
CDH1-205ENST00000562836 SELENONQ9NZV5 590 aa10.08□□□□□ -0.8
CDH1-205ENST00000562836 EIF4G3O43432 1585 aaKnown RBP10.08□□□□□ -0.8
CDH1-205ENST00000562836 CYP2D7A0A087X1C5 515 aa10.08□□□□□ -0.8
CDH1-205ENST00000562836 CHEK2O96017 543 aa10.08□□□□□ -0.8
CDH1-205ENST00000562836 RARBP10826 455 aa10.08□□□□□ -0.8
CDH1-205ENST00000562836 RAC2P15153 192 aa10.08□□□□□ -0.8
CDH1-205ENST00000562836 SERPINB3P29508 390 aa10.08□□□□□ -0.8
CDH1-205ENST00000562836 CCNG1P51959 295 aa10.08□□□□□ -0.8
CDH1-205ENST00000562836 SEC24CP53992 1094 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms