RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 GTF2F1P35269 517 aaKnown RBP eCLIP18.86■□□□□ 0.61
TNRC6A-209ENST00000562829 DSC3Q14574 896 aa18.86■□□□□ 0.61
TNRC6A-209ENST00000562829 TARBP2Q15633 366 aaKnown RBP18.86■□□□□ 0.61
TNRC6A-209ENST00000562829 CLUL1Q15846 466 aa18.86■□□□□ 0.61
TNRC6A-209ENST00000562829 B3GNT9Q6UX72 402 aa18.86■□□□□ 0.61
TNRC6A-209ENST00000562829 FAM178BQ8IXR5 827 aa18.86■□□□□ 0.61
TNRC6A-209ENST00000562829 ABI1Q8IZP0 508 aa18.86■□□□□ 0.61
TNRC6A-209ENST00000562829 RNF169Q8NCN4 708 aa18.86■□□□□ 0.61
TNRC6A-209ENST00000562829 NIFKQ9BYG3 293 aaKnown RBP18.86■□□□□ 0.61
TNRC6A-209ENST00000562829 EPHX3Q9H6B9 360 aa18.86■□□□□ 0.61
TNRC6A-209ENST00000562829 ELAC1Q9H777 363 aaKnown RBP18.86■□□□□ 0.61
TNRC6A-209ENST00000562829 HCSTQ9UBK5 93 aa18.86■□□□□ 0.61
TNRC6A-209ENST00000562829 HOXA2O43364 376 aa18.85■□□□□ 0.61
TNRC6A-209ENST00000562829 CTDNEP1O95476 244 aa18.85■□□□□ 0.61
TNRC6A-209ENST00000562829 DARSP14868 501 aaKnown RBP18.85■□□□□ 0.61
TNRC6A-209ENST00000562829 FGFR4P22455 802 aa18.85■□□□□ 0.61
TNRC6A-209ENST00000562829 IRS1P35568 1242 aa18.85■□□□□ 0.61
TNRC6A-209ENST00000562829 DNM2P50570 870 aa18.85■□□□□ 0.61
TNRC6A-209ENST00000562829 PSMC5P62195 406 aa18.85■□□□□ 0.61
TNRC6A-209ENST00000562829 DRP2Q13474 957 aa18.85■□□□□ 0.61
TNRC6A-209ENST00000562829 CAMK1Q14012 370 aa18.85■□□□□ 0.61
TNRC6A-209ENST00000562829 COL19A1Q14993 1142 aa18.85■□□□□ 0.61
TNRC6A-209ENST00000562829 THNSL1Q8IYQ7 743 aa18.85■□□□□ 0.61
TNRC6A-209ENST00000562829 GJD3Q8N144 294 aa18.85■□□□□ 0.61
TNRC6A-209ENST00000562829 NECAB1Q8N987 351 aa18.85■□□□□ 0.61
TNRC6A-209ENST00000562829 OXER1Q8TDS5 423 aa18.85■□□□□ 0.61
TNRC6A-209ENST00000562829 FAM20AQ96MK3 541 aa18.85■□□□□ 0.61
TNRC6A-209ENST00000562829 NAP1L4Q99733 375 aaKnown RBP18.85■□□□□ 0.61
TNRC6A-209ENST00000562829 BRMS1Q9HCU9 246 aa18.85■□□□□ 0.61
TNRC6A-209ENST00000562829 CD320Q9NPF0 282 aa18.85■□□□□ 0.61
TNRC6A-209ENST00000562829 TYW1Q9NV66 732 aaKnown RBP18.85■□□□□ 0.61
TNRC6A-209ENST00000562829 PLXNA4Q9HCM2 1894 aa18.85■□□□□ 0.61
TNRC6A-209ENST00000562829 EML1O00423 815 aa18.84■□□□□ 0.61
TNRC6A-209ENST00000562829 KRT2P35908 639 aa18.84■□□□□ 0.61
TNRC6A-209ENST00000562829 NDUFV1P49821 464 aa18.84■□□□□ 0.61
TNRC6A-209ENST00000562829 FAM189BP81408 668 aa18.84■□□□□ 0.61
TNRC6A-209ENST00000562829 PLA2G4FQ68DD2 849 aa18.84■□□□□ 0.61
TNRC6A-209ENST00000562829 PPP4R3AQ6IN85 833 aa18.84■□□□□ 0.61
TNRC6A-209ENST00000562829 ADGRD2Q7Z7M1 963 aa18.84■□□□□ 0.61
TNRC6A-209ENST00000562829 MICAL1Q8TDZ2 1067 aa18.84■□□□□ 0.61
TNRC6A-209ENST00000562829 GCOM2Q9BZD3 368 aaPredicted RBP18.84■□□□□ 0.61
TNRC6A-209ENST00000562829 TMEM117Q9H0C3 514 aa18.84■□□□□ 0.61
TNRC6A-209ENST00000562829 KCNMB3Q9NPA1 279 aa18.84■□□□□ 0.61
TNRC6A-209ENST00000562829 BDP1A6H8Y1 2624 aa18.83■□□□□ 0.61
TNRC6A-209ENST00000562829 LINC01565O15544 149 aa18.83■□□□□ 0.6
TNRC6A-209ENST00000562829 DKC1O60832 514 aaKnown RBP eCLIP18.83■□□□□ 0.6
TNRC6A-209ENST00000562829 EIF5BO60841 1220 aaKnown RBP18.83■□□□□ 0.6
TNRC6A-209ENST00000562829 TBX10O75333 385 aa18.83■□□□□ 0.6
TNRC6A-209ENST00000562829 CSDE1O75534 798 aaKnown RBP18.83■□□□□ 0.6
TNRC6A-209ENST00000562829 STBD1O95210 358 aa18.83■□□□□ 0.6
TNRC6A-209ENST00000562829 LARGE1O95461 756 aa18.83■□□□□ 0.6
TNRC6A-209ENST00000562829 LAG3P18627 525 aa18.83■□□□□ 0.6
TNRC6A-209ENST00000562829 LTBRP36941 435 aa18.83■□□□□ 0.6
TNRC6A-209ENST00000562829 QARSP47897 775 aaKnown RBP18.83■□□□□ 0.6
TNRC6A-209ENST00000562829 FOSBP53539 338 aa18.83■□□□□ 0.6
TNRC6A-209ENST00000562829 DLX2Q07687 328 aaPredicted RBP18.83■□□□□ 0.6
TNRC6A-209ENST00000562829 PPP2R5CQ13362 524 aa18.83■□□□□ 0.6
TNRC6A-209ENST00000562829 ME3Q16798 604 aa18.83■□□□□ 0.6
TNRC6A-209ENST00000562829 CTC1Q2NKJ3 1217 aa18.83■□□□□ 0.6
TNRC6A-209ENST00000562829 ECHDC2Q86YB7 292 aa18.83■□□□□ 0.6
TNRC6A-209ENST00000562829 POTEDQ86YR6 584 aa18.83■□□□□ 0.6
TNRC6A-209ENST00000562829 RHPN2Q8IUC4 686 aa18.83■□□□□ 0.6
TNRC6A-209ENST00000562829 COLGALT1Q8NBJ5 622 aa18.83■□□□□ 0.6
TNRC6A-209ENST00000562829 KHSRPQ92945 711 aaKnown RBP eCLIP18.83■□□□□ 0.66e-7■■■□□ 15.4
TNRC6A-209ENST00000562829 GTF3C6Q969F1 213 aa18.83■□□□□ 0.6
TNRC6A-209ENST00000562829 SUCLA2Q9P2R7 463 aaPredicted RBP18.83■□□□□ 0.6
TNRC6A-209ENST00000562829 VAV3Q9UKW4 847 aa18.83■□□□□ 0.6
TNRC6A-209ENST00000562829 A0A087WZ62 844 aa18.82■□□□□ 0.6
TNRC6A-209ENST00000562829 FGF18O76093 207 aa18.82■□□□□ 0.6
TNRC6A-209ENST00000562829 NRIP1P48552 1158 aa18.82■□□□□ 0.6
TNRC6A-209ENST00000562829 NEK4P51957 841 aa18.82■□□□□ 0.6
TNRC6A-209ENST00000562829 CDC42EP1Q00587 391 aa18.82■□□□□ 0.6
TNRC6A-209ENST00000562829 UBE3AQ05086 875 aa18.82■□□□□ 0.6
TNRC6A-209ENST00000562829 NR5A1Q13285 461 aa18.82■□□□□ 0.6
TNRC6A-209ENST00000562829 CSPP1Q1MSJ5 1256 aa18.82■□□□□ 0.6
TNRC6A-209ENST00000562829 NCAPH2Q6IBW4 605 aa18.82■□□□□ 0.6
TNRC6A-209ENST00000562829 ANO5Q75V66 913 aa18.82■□□□□ 0.6
TNRC6A-209ENST00000562829 RBM23Q86U06 439 aaKnown RBP18.82■□□□□ 0.6
TNRC6A-209ENST00000562829 LRRC43Q8N309 656 aa18.82■□□□□ 0.6
TNRC6A-209ENST00000562829 NLRP4Q96MN2 994 aa18.82■□□□□ 0.6
TNRC6A-209ENST00000562829 CEP89Q96ST8 783 aa18.82■□□□□ 0.6
TNRC6A-209ENST00000562829 JPH2Q9BR39 696 aaPredicted RBP18.82■□□□□ 0.6
TNRC6A-209ENST00000562829 FDXACB1Q9BRP7 624 aaPredicted RBP18.82■□□□□ 0.6
TNRC6A-209ENST00000562829 TLR9Q9NR96 1032 aa18.82■□□□□ 0.6
TNRC6A-209ENST00000562829 DACT1Q9NYF0 836 aa18.82■□□□□ 0.6
TNRC6A-209ENST00000562829 PCDHGC5Q9Y5F6 944 aa18.82■□□□□ 0.6
TNRC6A-209ENST00000562829 IGKV6-21A0A0C4DH24 114 aa18.81■□□□□ 0.6
TNRC6A-209ENST00000562829 FAM205CA6NFA0 338 aa18.81■□□□□ 0.6
TNRC6A-209ENST00000562829 TBX3O15119 743 aa18.81■□□□□ 0.6
TNRC6A-209ENST00000562829 MAFO75444 373 aaPredicted RBP18.81■□□□□ 0.6
TNRC6A-209ENST00000562829 BAG4O95429 457 aaKnown RBP18.81■□□□□ 0.6
TNRC6A-209ENST00000562829 P4HBP07237 508 aaKnown RBP18.81■□□□□ 0.6
TNRC6A-209ENST00000562829 SFPQP23246 707 aaKnown RBP eCLIP18.81■□□□□ 0.67e-8■■□□□ 11.6
TNRC6A-209ENST00000562829 NPEPPSP55786 919 aa18.81■□□□□ 0.6
TNRC6A-209ENST00000562829 EARS2Q5JPH6 523 aaKnown RBP18.81■□□□□ 0.6
TNRC6A-209ENST00000562829 SLC7A3Q8WY07 619 aa18.81■□□□□ 0.6
TNRC6A-209ENST00000562829 CASD1Q96PB1 797 aa18.81■□□□□ 0.6
TNRC6A-209ENST00000562829 INO80BQ9C086 356 aaPredicted RBP18.81■□□□□ 0.6
TNRC6A-209ENST00000562829 CWH43Q9H720 699 aa18.81■□□□□ 0.6
TNRC6A-209ENST00000562829 CYP26B1Q9NR63 512 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms